Austrofundulus limnaeus (annual killifish): 106517835
Help
Entry
106517835 CDS
T06063
Symbol
thbs2
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04145
Phagosome
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106517835 (thbs2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106517835 (thbs2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106517835 (thbs2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106517835 (thbs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106517835 (thbs2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106517835 (thbs2)
00536 Glycosaminoglycan binding proteins [BR:
alim00536
]
106517835 (thbs2)
Membrane trafficking [BR:
alim04131
]
Endocytosis
Phagocytosis
Opsonins
106517835 (thbs2)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106517835 (thbs2)
Exosomal proteins of colorectal cancer cells
106517835 (thbs2)
Exosomal proteins of bladder cancer cells
106517835 (thbs2)
Glycosaminoglycan binding proteins [BR:
alim00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106517835 (thbs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_CFP_C
TSP1_ADAMTS
TSP1_CCN
cEGF
Laminin_G_3
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
106517835
NCBI-ProteinID:
XP_013864357
UniProt:
A0A2I4B9G2
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MILRSSLFLLLLSTFHQVTPQEGEQEDQVSFDLFEISHITRKTIGVRPFRGPNSNIPTYR
FIRFDHLPPVRAPVLKQILRQIQNNEGFVFVATIRQDRSTRGTLLGLEGPDGRRQFEIVS
NGRANTLDLIYWVDGSQNVVSFEDVDLSDSQWKNVTLHVHGENANLFVGCSLIDSFILDE
PFYEHLQAEGSRMYVAKGSIRDNHFRGLLQDVRFIFDTSVEDILQSRDCKVTKQDDENAV
SESTEIVDVSPSITTNSIGQKTDDLDADMCERSCEELSTMFQELKGLRVVVSNLIDGLQK
VTEENTVMKEALGRMKDSKEKNMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCP
PVACASPSLIDGECCPVCMPKDSEDGWSPWSEWTECTVTCGIGTQQRGRSCDATSNPCSG
PSIQTRKCSLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDCE
GSGRETQKCTAKPCPIDGGWGPWSPWATCSATCGGGIKSRSRECNSPQPQYGGKKCIGEA
TDSNSCNKEDCPIDGCLSNPCFGGVDCSSSPDGSWECGPCPAGFRGNGTHCEDVNECDMV
SDICYKVSGTQRCINTDPGFHCLPCPKRYKGNQPFGMGIEAAKTNKQVCEPENPCKDKTH
NCHKYAECIYINHFSDPMYKCECRTGYAGDGFICGEDSDLDGWPNQNLLCGTNSTYHCKK
DNCPSLPNSGQEDFDRDGQGDACDKDDDNDGIPDDRDNCALLYNPRQFDFDKDDVGDRCD
NCPYEHNPAQIDTDHNGEGDSCAVDIDGDEIHNENDNCPYVYNTDQKDTDMDGVGDQCDN
CPLLHNPDQTDVDNDLVGDQCDNNQDIDEDGHQNNLDNCPYVANANQADHDKDGKGDACD
YDDDNDGIPDDKDNCRLTPNEDQQDNDGDGRGDACKDDFDNDNIPDFLDVCPENNAISVT
DFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTMYVN
TDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGEN
LRNALWHTGNTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADS
GPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPEFSTVFIR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgattctcaggagcagtctcttcttgttgctcctatctacattccatcaagtaacacct
caagaaggagagcaggaggatcaggtgtccttcgacttgtttgaaataagccacatcaca
cgcaaaaccattggggtcagaccattcaggggcccaaactccaacatccccacctaccgc
ttcatccgcttcgaccacctgcctcccgtcagggcccccgtcctgaagcaaatcctccga
cagatccaaaacaacgagggcttcgtgttcgtcgccaccatccgccaggaccgatccacg
cgggggaccctgctgggcctggagggccccgacggccggcggcagttcgagatcgtgtcc
aacgggcgcgccaacaccctggacctgatctactgggtggacggctcgcagaacgtggtg
tcgttcgaggacgtggacctgtcggactcgcagtggaagaacgtcacgcttcacgttcac
ggcgagaatgccaacctgttcgtgggctgcagcctgatcgacagcttcatcctggacgag
cccttctacgagcatctgcaggccgagggaagccggatgtatgtggcgaagggttccatt
cgggataaccacttcaggggtcttcttcaggatgtgcgtttcatctttgacacctcggtg
gaagacatcctccagagccgagactgcaaggtgactaaacaagatgatgaaaatgctgtg
agcgagagcacagaaattgtggacgtgagtccttccatcacgacaaacagcataggtcag
aagacagatgacctggacgcggatatgtgcgaacgctcatgtgaggaacttagcaccatg
ttccaggagctcaaaggcctccgtgttgttgtcagtaatctcattgacggcttgcaaaaa
gtgacagaggagaacacggtcatgaaggaggccctcgggagaatgaaggactctaaagag
aaaaacatgtgctggcaggacgggcgtctgttcgaggacaaggaagactgggttgtagac
agctgcactaaatgtacctgccaggagtccaagattgtgtgtcaccaaattacatgtcca
cccgtggcctgtgccagcccctctttaattgatggagagtgctgccctgtgtgcatgcct
aaagacagtgaggatggctggtcaccctggtcagagtggacagagtgcacagtcacctgt
gggataggaacccaacagaggggccggtcatgtgatgcaaccagcaacccctgcagcgga
ccctctatccagacccgcaagtgtagcctgggcaaatgtgacagccgtgtgcgccaagat
ggagggtggagtttgtggtccccatggtcgtcttgctctgtgacctgtggggaaggacag
atcactagaatacggcactgcaacgctcctgtgccacagctggggggcaaagactgcgag
gggagtggaagagagactcagaagtgcactgccaagccatgtccaattgatggtggttgg
ggaccttggtctccatgggcaacctgttctgcaacatgtggcggaggaatcaaaagtcga
tcgcgagagtgcaacagccctcaaccacaatatggtggcaaaaagtgcatcggtgaggcc
acagacagcaacagctgcaacaaggaggactgccccattgatggctgcctgtctaaccct
tgctttggaggagttgactgcagcagctctccagatggctcctgggaatgtggcccatgt
cctgctggttttcgtggtaatggcactcattgtgaagacgttaatgagtgcgacatggta
tctgacatttgctacaaagtgagtggaacgcagcgttgcatcaacactgatccaggtttc
cactgcctgccctgtccgaagcgctacaaaggcaatcagccttttggtatgggtattgaa
gctgccaagacgaacaaacaagtatgcgaaccagagaacccatgtaaagacaagacccac
aactgtcacaaatacgctgaatgcatctacatcaaccacttcagtgacccaatgtacaaa
tgcgagtgtcgcactggctacgctggagatggctttatatgtggcgaagactccgactta
gatggatggcccaatcagaaccttttgtgtggtaccaactctacttatcactgcaagaag
gataactgccctagtctccccaattctggtcaagaagattttgacagagatggccaagga
gacgcttgtgacaaggatgacgacaatgatggaatcccggatgacagggacaactgtgcc
ctcctttacaatcctcgccagtttgactttgataaagacgacgttggcgaccgctgtgac
aactgtccctacgaacacaacccagcacagatagacaccgatcataacggcgagggtgat
tcctgcgcagtggacattgatggagatgaaattcacaatgagaatgacaactgcccctat
gtgtacaacactgaccagaaggacacagacatggacggtgttggagatcaatgcgacaat
tgtccattgcttcataatccagatcagactgatgtggacaacgacttggtaggagatcag
tgtgataacaaccaggacattgatgaagatggtcatcaaaacaatttagacaattgtcca
tatgtggccaacgccaaccaagcagaccatgacaaagatggaaaaggagatgcatgtgac
tatgatgatgacaacgatggtatacctgatgacaaagacaactgtagactgacacccaac
gaagaccagcaggacaatgatggcgatggaagaggtgacgcatgcaaagacgattttgat
aacgacaacatcccagatttcctcgatgtgtgtccagagaataatgccattagtgtgaca
gacttcaggaagttccagatggtccacttggatcctaagggaactactcaaattgatccc
aattgggtggtgagacaccagggcaaagagctggttcagactgccaattctgacccaggc
atcgcagtaggtttcgatgagttcaatgcagtggacttcagtggaacaatgtatgtgaac
acggacagagacgatgactatgctggctttgtgtttggctatcaatcaagcgggcgcttc
tacgtggtcatgtggaaacagatcactcagacttactgggaggacaaaccctccaaagct
tttggcatctcaggcgtttcgcttaaagtcgtcaactcaaccacaggaacgggagaaaac
ctcaggaatgctttgtggcacacgggaaacactgcaggacaggtccgcactttgtggcac
gaccccaaaaatattggttggaaggattacacagcttataggtggcatctcatccacaga
ccaaagactggcttcataagggttgtggtttatgaaggcaaacagatcatggctgactca
ggaccagtttatgacaagacgtttgctggagggaggttaggtttgttcgtcttctcgcaa
gaactggttttcttctccgacctcaagtatgagtgcagagataagccagagttttcaaca
gtgttcataagataa
DBGET
integrated database retrieval system
