Austrofundulus limnaeus (annual killifish): 106517846
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Entry
106517846 CDS
T06063
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106517846
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106517846
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
106517846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106517846
NCBI-ProteinID:
XP_013864333
UniProt:
A0A2I4B9D9
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGALESTTPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAII
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGMAIKKDEETLKKNCPHIVVGTPGRILALIR
NKTLXLKNVKHFVLDECDKMLEQLDMRRDVQDIFRMTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCI
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgacgttgataacgagctgctcgactatgaagaagatgaagagccccaa
ggagctctagagagtacaactcctgcaggaaagaaagaggtgaagggttcctacgtgtcc
atccacagctccggcttcagagatttccttctcaaaccagagctgctcagagccatcatt
gactgtggttttgaacatccatctgaagttcagcatgaatgcatcccacaggctatcctt
gggatggacatcctgtgccaagccaagtctggtatgggtaagacagctgtgtttgtgttg
gccacactgcaacagatcgaacctgttgatgggcaggtgtccgtattagtcatgtgccac
acgcgagagctggccttccagatcagcaaagagtacgagcgtttctccaagtacatgccc
accgtgaaggcagccgtgttcttcggcggcatggccatcaaaaaggacgaggagaccttg
aaaaagaactgccctcacatcgtagtcgggacgcctggtcgaatcctcgctctgatccgc
aacaagaccctcrgcctgaaaaatgtcaagcattttgttctggatgagtgcgacaagatg
ctggagcagctagacatgaggcgcgacgtgcaggacatcttcaggatgacgccccacgag
aagcaggtcatgatgttcagcgcgacactgagtaaggagatccgaccagtctgccgcaag
ttcatgcaggatcctatggaggtgtttgtggatgacgagaccaaactcacactccacggt
ctgcagcagtactactgcaagctgaaagacagcgagaagaaccgcaagctctttgatctt
cttgacgtgttagagtttaatcaggtggtgatctttgtcaagtcagtgcagcgatgcatc
gctctgtctcagctcctggtggaacagaacttcccagctatcgccatccacagaggaatg
gctcaggaggaaaggctgtctcgctatcaacaattcaaagacttccagcggcgaatcttg
gtggcgacaaacctgtttggccgagggatggacatcgagagagtgaacatcgtcttcaac
tacgacatgccagaagattctgacacctatttgcacagggttgcccgtgctggtaggttt
gggaccaaaggcctggctataacctttgtgtctgatgagaccgatgccaagactctgaac
gatgtgcaggaccgctttgaagtcaacgtggccgagctgcctgacgagatcgacatctcg
tcttacatcgaacagtccagatga
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