Austrofundulus limnaeus (annual killifish): 106517976
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Entry
106517976 CDS
T06063
Name
(RefSeq) protein polybromo-1-like
KO
K11757
protein polybromo-1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106517976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106517976
03036 Chromosome and associated proteins [BR:
alim03036
]
106517976
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106517976
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
106517976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106517976
NCBI-ProteinID:
XP_013864490
UniProt:
A0A2I4B9S8
LinkDB
All DBs
Position
Unknown
AA seq
1579 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDDSQTSLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRDY
KDDQGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVEQLTSDFQLLF
NNAKTYYKSESPEYRAACKLWDLYLRTKNEFVQRGDYEDDDEDGDDVQENPGGSTEDESV
SACLKEVLEQLLDAVVSYTEPSGRLVSELFQKLPSKMQYPDYYAIIKEPIDLKIIAQKIQ
LGHYRSVSAMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKIFAQKKSEIEHGEPIKSSIR
IRNKRFAQGDRLSAITMALQYESDEEGILSGSVHYDEGESEAECLTSNIDMSNPIFQLYE
AVRGARNSQGQLISEPFLQLPSRKDYPDYYQQISHPTCLHHIKNKMKNNEYESVEHVNAD
LTLLLENAKRYNVPHSSIYKRALKLQHIQQMKRKELLQRVDDDGDSMLSSATSDTSSTKR
KSYKKNTKKNRMKALFAAVTEAREAGTGRRLCDLFTVKPSKKDYPDYYKVILEPMDLRTV
EHNIRSDKYVTEDLMVEDMKLMFRNARHYNEEGSQVYNDADILEKIMEDKRRDLGPAMDD
DDLMSPKLKIRKNSIFLKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLRLPSRAE
LPDYYLAIKKPVDMEKIKSHMLANKYQDVDALVEDFVLMFNNACTYNEPESLIYRDALLL
HRVLLETRRDLEGGEDAHVPDVPRLIQDLVRSLFVSVLGHQDDEGRCYSDSLAEIPAADP
ANSEKPLLNFEIVRKNVDRGRYKRLDVFQDHMFEVLEKARRLNRTDSEIFEDAVELQHFF
IRIRDELCKNGEILMSPALSYTSKHLHSDVEKEKKKKLPKEFEEDKIKREEEKREAEKRE
DSTGSSWQVQRTYSQDCSFKDSMYHVGDYVYVEPAEPNLQPHIIYIERLWQDDTGEKWLY
GCWFYRPNETFHLATRKFLEKEVFKSDYYNKAPVSKILGKCVVMFVKEYFKLYPEGFRPE
DVYVCESRYSAKSKSFKKIKLWAMPLSSVRFVPREVPLPVVRVASMFAPKQEEKPPEVID
EGKMTDGVLDKEREDVPLDVTNGEPGCQYYEQLCYNNLWLKVGDCVYIGSHGLVRHRVGR
IEKMWMRDGAGYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCVVASF
KEYLSCRPTEVPETNVLLCESRYIESEKQMKKFKGLKRFSLSGKVVEDEIYYFRKLIVPQ
KEPSPLLDKKIEELEAKFADMTDEELEDLGDDDSDLRDHSLPQMQSSMSSDMDIMPYTPP
QSTPKSLKGLSKKERATRKINMSGYILFSSEMRAVIKAQHPDFSFGDLSRLVGTEWRNLD
SSRKAEYEERAAKVAEQQERDRAHHHTSPRAGTPVGALMGVVPPPTPMGMLNPSMTPVSG
VNGMGSGAAAGSILGSQLGLTGSDQQAPPPYPGHGQAALHQPSTPLFVSPPATSQRLLHS
EAYLRYIEGLTAESSTVSKWDQALTVQKQDVRLTKEQESRLPSHWLKSKGAHKTMADALW
RLRDLMLRDSLNIRQMYNL
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaaaagaagacgggcgacgtccccctctagcagtgtgagtggaggagatttt
gacgatagccagacttcgttagtgtcttcaattgggcgaaagaggagaaggacctcaaac
attccaactgtggatcctatcgctgtgtgccatgagctctacaacacaatcagagactac
aaggacgaccagggcaggatgctgtgcgagttgttcatcagagcccccaaacgaaggaat
caaccagactattaccacgtggtctctcagcccatcgacatgatgaagatccagcagaaa
ttaaagatggaggaatacgatgatgttgaacaactaaccagtgacttccagctactattc
aacaatgcaaaaacatactataagtcagagagtcctgaatacagagcggcctgtaagctg
tgggatctttacctgcgaaccaagaacgagtttgttcaaagaggagattatgaagatgat
gatgaagacggagacgatgtgcaggagaatcctggaggatccacagaggatgagagtgtg
tctgcctgtttgaaagaggtgctggagcagcttcttgatgccgtcgtgtcgtacaccgag
ccgagcggtcggctggtcagcgagctctttcagaagcttccctctaaaatgcaatatcca
gattattatgccataatcaaggagcctattgatctaaaaatcatcgctcagaaaatccag
ttgggacactacaggagcgtcagcgccatggctaaagacatcgacctgttggtaaagaat
gccaaaacctacaatgagcctggatcacaggtttttaaggatgctaacaccatcaagaag
atttttgcacaaaagaagtctgaaatcgaacacggagagcccatcaagtcaagcatccgc
atccggaataaaagatttgcccagggagaccgcctctcagckatcactatggctctacag
tatgagagcgacgaggaggggatactctccgggtctgtgcactacgatgaaggagagtcc
gaggcggagtgtttgacgtccaacatcgacatgagcaatcccatcttccagctctacgag
gcggtgcgaggggccaggaacagtcagggtcagctgatttctgagcctttcctgcagctg
ccctccaggaaagattaccccgactattaccaacagatcagtcacccgacctgcctgcac
cacatcaagaacaagatgaagaacaacgagtacgagagcgtggagcacgtcaacgccgat
ttgactctgctgctcgagaacgccaagcgctacaatgttcctcactcctccatctacaag
cgtgcactcaaacttcagcacattcagcagatgaaaaggaaggagcttctgcagagagtg
gatgatgatggtgatagtatgctctcctctgccacgtctgacaccagcagcacaaaaaga
aaaagctacaagaagaatacgaagaaaaatcgaatgaaagctctcttcgctgcggtgaca
gaagcacgggaagccggcaccggccgcaggctgtgcgacctcttcacggtgaagccatcg
aagaaggactaccctgattactacaaagtgatcctggagccgatggacctccggaccgtt
gagcataacatccgctcagacaaatacgtgactgaagatttaatggtagaggacatgaag
ctgatgttccgcaatgcacgacactacaacgaagaaggctcccaggtctacaatgacgca
gatatcctggagaagatcatggaagacaaacgaagagatctggggccagcaatggacgat
gatgacttgatgtccccaaagttaaaaataagaaaaaacagcatctttctgaagaaatcc
aagtacttaacgcccttacagcagaaattgaatgagctttacgaagctgtgaagaactac
accgataagcgcggccgtcgcctcagcaccatcttcctccggctcccgtctcgcgccgag
ctgcccgactactacctcgccatcaagaagcccgtggacatggagaagatcaagagccac
atgctggccaacaagtaccaggacgtggacgcgctggtggaggactttgtgctcatgttc
aacaacgcctgcacctacaacgagcccgagtctctgatctaccgcgacgccctgctgctg
cacagggtgctgttggagaccagacgtgacctggaggggggagaggacgcccacgtgccc
gacgtgccccgcctcatccaggatctcgtccgcagcctgtttgtgtctgtgctcggtcac
caggacgacgaggggcgatgctacagcgattctctcgcggagatccccgctgccgatccc
gccaactccgagaagccgctgctcaacttcgaaatcgtcaggaagaatgtggatcggggg
cgttacaagaggctggatgtgtttcaggatcacatgtttgaagttctggaaaaggccaga
cggttgaataggactgactcagagatctttgaagatgcagtggagctgcagcatttcttc
attcgtatccgagacgagctgtgtaaaaatggagaaatcttaatgtcccctgctctcagc
tacacctctaagcatctgcacagcgacgtggagaaggagaagaaaaaaaagcttcccaag
gagtttgaggaggacaaaatcaagagagaggaggagaaaagggaagctgagaagagggag
gactctactggcagctcatggcaggtccagcgtacgtacagccaggactgcagcttcaag
gacagcatgtaccacgtgggagactacgtctatgtggagcctgctgagcccaacctgcag
ccacacattatttacattgaacgtctttggcaagatgacaccggagagaagtggctgtat
ggctgctggttctacagaccgaatgaaacctttcacctggctacaagaaaattcttggag
aaagaagtttttaaaagcgactattacaacaaagctcccgtcagcaagattctggggaaa
tgtgtggttatgtttgtgaaggagtatttcaagctctacccggagggattcaggcccgag
gacgtgtacgtgtgcgagtctcgctactccgccaagtccaagtccttcaagaagatcaag
ctgtgggccatgcctctgagctccgttcgatttgttcccagagaggtgcctcttcctgta
gtccgagtggcgtccatgtttgcacccaaacaagaagagaagccgccagaggttatagat
gagggcaagatgactgatggtgttttagacaaggagagggaggatgttccactagacgtg
accaacggggagccaggctgtcagtactatgagcagctctgctacaacaacctgtggctg
aaagtaggagactgtgtttacatcggttctcatggactagtgcgccaccgtgtgggcaga
attgagaaaatgtggatgcgagatggagcaggctatttctttggccccatttttatccat
cctgaggagacggagcatgagcccactaagatgttctacaagaaagaagtgttcctcagc
aacctggaagagacttgccccatgacctgcatcttaggaaagtgcgttgtggcctccttc
aaagaatatttgtcgtgtcggcccactgaagtgcctgaaacaaatgtccttctttgtgag
agtcgctacatagagagtgaaaagcagatgaagaagttcaagggtcttaagcgattttca
ctctcggggaaggtggtcgaggatgaaatctactactttagaaaactcatcgttccccag
aaagaaccatcgccactacttgacaagaaaatcgaggagctcgaagccaagtttgctgac
atgacagacgaagagctggaggatcttggggacgatgacagcgacctgagagatcattct
cttcctcagatgcagtcgtccatgtctagtgacatggatattatgccttacacccctccg
cagtcaacccctaagtcattaaaggggctttcaaagaaggaaagagcaacaaggaagatc
aacatgagcggttacatcctgttcagcagtgagatgcgagccgtcatcaaagcccagcac
ccggatttctcttttggagacctgagccgtcttgttggcacagagtggaggaacctggac
agttccaggaaggcagagtatgaagagcgagcagccaaggtagccgagcagcaggagcgt
gacagggcccaccatcacacatccccgagagcaggtaccccagtaggggcgctgatgggg
gtggtgcctcccccaacccccatggggatgctaaatcccagcatgacacctgtgtcaggt
gttaatggaatgggaagtggtgctgcagcagggagcatccttggatcccagttgggtttg
acgggctcagaccagcaggctccaccaccgtacccaggacacggccaagctgcgcttcat
caaccctccacgccattgtttgtgtctcctccagccacatctcagcggctgctgcactcg
gaggcttacctcagatacatcgagggcctcaccgcagaatcttctacagtcagcaaatgg
gaccaagctctcacagttcaaaaacaagatgtgcgcctaactaaagagcaagaaagcagg
ctaccatcccattggctgaagagcaaaggggcccacaaaaccatggcagatgcactttgg
aggctccgtgacctgatgctgcgagacagcctgaacatccgtcagatgtacaacctgtag
DBGET
integrated database retrieval system
