Austrofundulus limnaeus (annual killifish): 106517987
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Entry
106517987 CDS
T06063
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106517987 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106517987 (atrx)
03036 Chromosome and associated proteins [BR:
alim03036
]
106517987 (atrx)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
106517987 (atrx)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
106517987 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
106517987
NCBI-ProteinID:
XP_013864502
UniProt:
A0A2I4B9W0
LinkDB
All DBs
Position
Unknown
AA seq
2185 aa
AA seq
DB search
MSLASSESHLDQMVDKEEEPGSSTESVRPSSSWNRRKPAIVMRHTGQNESDASADSENEA
ATSDSNTGSGSKGTLVMRPTGNENKGAMKLRVDFKQKKTDDTLQKKVSCTACGKQVNQFQ
RNSVFEHPALKVLICKSCFKYYTSDDINRDSDGMDEQCRWCAEGGKLICCDYCNNAFCKK
CILRNLGRKELSSITDEDSKWHCYVCRSEPLQDLVSKCHRVIQKQEDVELKQQKTEKTER
DKKQDKSKSPKEHRAVANGKEHVEGSGTMTFSYKNLQVPKEIIKKAKKLVETTTGLNHTF
IQFIQQATDDRADKSIRYRHLKAFKAVLSDLKKAHDALEEALKPEFRHMELQNGTEEQHV
TKITNIVEPTENDQMDGVADSELETDAAKEVNKEEKVEEDSVCEAQMPEKIVKDLPDKDL
VCKEVIKKTVKKPLNEKDLCFKADEMEENIKEQVDETDETMQEDKELPKESNLFSKTEMM
EEDTEKQDNQDINNDEVSNQSAMQDHQTETDANTRIIKTEVCDDELLSAGEMSLDHDIMS
VPPSVPEELFQMVESLADSSMLSQADNSSVKDTNENATDSRRPQPKVKNLIVKLTPVPVV
KSCGSRSSRSKSKEDDAESIHKGQEDSEDKKTTSSSSADSPPPTRRSARVKTTPLRKQTE
NQSKKESSGSESEEDKKDKSKLFKKSSKTKKENGKLSKQAENQSKKESSESESEEDRKDK
SKLSKKSSKAKKEGGKSGKQAEKQIKKESSESESEEDGKKTVKSSKKSSNAKNDDVEKTE
TSEKTMEDSDSDEVPPALLEKTAAGNSTDEEQESTTAKKRLLKSNASTKDTERSSKRKRK
PESSDSDGDKKTKKMSKKKKQDSSGSSGSDSEREKDSKSKAPIAKRRSSRTKKQTDTKNE
QSSPEKKVNRKRSYEKKHKVKGNKASSKMQFSSSEDEEEEQDDGGSGEDSDEQKIRPIVE
DNVVGGSGAFHQSSGDEVETNEADTQMCEDDDDDPENRIAKKMLLAQIKSNYSSGAESSS
DNDEAEKEENSSKKVKDEDEDEDDNDDDQDEDVTEDSSSGSDVEVKKSRRRHKLLRHKLS
LSEGESGDEKSASRVKNKGSKRKSGKKVGSDDSADSDFEKSDSDDSESGVSEEVSESEND
GKRRSTRSSKKKEDDKRSYKQQKKKRRRIKVQDDSSSNEKSGKEEGEGEEDNEDQDGEGQ
KGRKKIRKILKDDKLRTETRDALKEEEERRKRIAEREALRQKLREVIVVEEASQVTCPIT
TKLVLDEDEETKEPLVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKIKKSAGSGCILAH
CMGLGKTLQVVTFLHTLLLCEKLDFSTALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVT
ELATVKRPQERAYALSSWQESGGVMIMGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPD
LVICDEGHILKNEASAVSKAMNSIKTRRRIVLTGTPLQNNLIEYHCMVNFIKENLLGSVK
EFRNRFINPIQNGQCADSTLHDVRIMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYV
LSVRMTPIQCKLYRHYLEHFTGVGNALEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYI
SKENRGFFDEDSMDDFIASETDESSMSLTSEDEKSKKKKKQGKGKKKGSDDSDSDDVEVI
KEWNSSSRGNKGEGRNRREPVEEPQDSTPASPRSADWHKEFVTDADAEILEHSGKMMLLF
EVLRMAEEVEDKVLVFSQSLISLDLIEDFLEMSCKIDEEXSKPTPYKGEGKWFRNIDYYR
LDGSTNALARKKWAEEFNDTSNTRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDI
QSIFRVYRFGQVKPVYVYRLLAEGTMEEKIYERQVTKQSLSYRVVDQQQIERHFTMNELA
ELYTFEPDTLDDPSGKKSKKPTPVLPKDPILAEMLQNNKDQIVCYHEHDSLLDHKEEEAL
SEEDRKAAWAEYEAEKKGLSMRTNHPLAYNQPDMGTSSYFSFNMAALASLNNQQLEDLIN
LGRQKVIEATNSLKSLVRESLEDIIARVWKENASLTESEVQSLALRHQATVEIEVKRREA
VYRDVLTKQQSLMMFVQKLITNRKVQEQQLAIANQASYLNQLAMQNGMVGSGGLSHMDMI
GLYQRLHGMGANQGMGKNPGPSNNL
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggcttcttctgaatcacatttagaccaaatggtagacaaggaagaggagccc
gggagctcaacagaaagtgtaagaccttcttcttcttggaacaggaggaagccagccatt
gtaatgaggcacacaggacagaatgaatctgatgcctcagctgacagtgaaaatgaagct
gccacctctgacagtaatacaggcagtggatctaaaggcactttagtgatgagaccaact
gggaatgaaaataaaggtgccatgaagctcagagttgatttcaaacagaaaaaaacagat
gatactctgcagaagaaggttagctgcaccgcctgtggaaagcaagttaaccagttccag
cgtaactctgtgttcgagcatcctgcgctcaaagtacttatttgcaagtcatgcttcaag
tactacacgagcgacgacatcaacagagattctgacgggatggacgaacaatgcaggtgg
tgtgctgaaggtggaaagcttatctgttgcgattactgcaacaacgccttctgcaagaag
tgtattctgcgaaacctgggcaggaaggagctgtcgagcataaccgatgaggactcaaag
tggcattgctacgtgtgccggtcagaaccactccaggatctggtctctaaatgccaccgt
gtcatacagaaacaagaagacgtggaacttaagcagcaaaaaacagagaaaacggaacgt
gacaaaaagcaggacaagagcaaatcaccaaaagagcacagagctgtagccaatggaaaa
gaacatgttgaaggctcaggaaccatgactttctcctacaaaaacctgcaggtacccaaa
gaaattataaagaaagcgaagaagcttgttgaaactacgactggtttgaaccacaccttc
atccagttcatccaacaggcgactgatgaccgggcagataagtctatcaggtaccgccat
ttgaaggccttcaaggcggttctgtcggatttgaaaaaagctcacgatgctttagaggaa
gctttaaagcctgaattcagacacatggagttacagaacggcactgaagagcaacacgtg
acaaagatcacaaatattgttgaaccaacagaaaatgatcaaatggacggtgttgcagat
tcagaactggagactgatgcagctaaagaagtgaacaaagaagagaaagttgaagaagat
tctgtttgtgaggcacaaatgcctgaaaagattgtcaaagacttgcctgataaagattta
gtttgtaaagaagtaattaagaagactgtcaaaaagcctcttaatgaaaaagatttatgt
tttaaagctgatgaaatggaggaaaacatcaaagagcaggttgatgaaaccgatgaaaca
atgcaagaagataaagagctgcctaaagaatccaatttgtttagcaaaactgaaatgatg
gaagaagatacggagaagcaggataaccaagacattaacaacgatgaagtttccaatcag
agtgcaatgcaagaccaccaaacagaaaccgatgcaaacacaagaataattaaaactgag
gtttgtgacgatgagctactgtcagcaggggaaatgtctttagaccatgacatcatgtca
gtacctccatcggttcctgaggagctttttcagatggtggagagccttgcagattcgtcc
atgctctcgcaggctgacaacagttccgtcaaagatacaaacgaaaacgcaacagactct
cggcgtcctcagccaaaagtaaagaatctgatagtcaaactgactccagtaccagttgtg
aaaagctgtggttcaaggtcttctaggtccaaaagcaaagaagatgatgcagagtcgata
cacaaaggtcaggaagattctgaggacaagaaaaccacttcctctagttctgcagacagc
ccaccgcccacccgccgctctgccagagtaaaaaccactcctttaaggaagcagacagag
aatcagagcaagaaagagtcctctgggtcagaatcagaggaggacaagaaggataagtcc
aaattgttcaagaaatccagtaaaaccaaaaaagaaaatgggaagttgagtaaacaggca
gagaatcagagcaagaaagagtcctccgagtcagaatcagaggaggacaggaaggacaag
tccaaattgtccaagaaatccagtaaagccaaaaaagagggtgggaaatcaggcaagcag
gcagagaagcagatcaagaaagaatcatccgagtcagaatcagaggaagacggcaagaaa
acagtcaaatcatccaagaaatccagcaacgccaaaaacgacgatgtggaaaagacagag
acttcagagaagacaatggaggactccgactcagatgaagtccctcctgcattgctggag
aaaactgcagcaggcaatagcacagatgaggagcaggagtccacaacagccaaaaaacgt
ttactgaagtcaaacgcatccacaaaggacacagaaagatcatccaaacgcaaaagaaaa
cctgaaagctcagattctgacggagacaaaaaaactaagaaaatgtctaaaaagaagaaa
caggacagctcaggctcttcaggttcagactctgaacgggagaaggactcgaagagtaaa
gcaccaattgcaaagagaagatctagtcgtacaaaaaagcaaactgacacaaaaaacgaa
caaagctcacccgaaaagaaggttaaccggaaacggtcttatgagaaaaagcacaaggta
aagggtaacaaagcatcatccaagatgcagttctcctccagtgaggatgaggaagaggag
caagatgatggaggctcaggagaggacagcgacgagcagaagatccgacccattgtggag
gataatgtagttggaggcagtggagccttccatcagtcctcaggagacgaagtggagact
aacgaggctgacactcagatgtgtgaagatgacgacgatgaccctgagaacaggattgct
aaaaagatgcttcttgctcaaataaaatctaactattcttccggagcagagagctcctct
gataacgacgaggcagaaaaggaagagaactcctccaagaaagttaaagacgaggacgag
gatgaggatgacaatgacgatgatcaagatgaagacgttacagaagacagttcatccggt
tcagatgttgaagtgaagaagagtcgcaggcgacacaaacttctccgtcacaaactctcc
ctgagtgaaggtgaatccggggacgagaaatctgccagtagagtgaagaataaggggagc
aagagaaagtcagggaaaaaagtaggaagtgatgactctgcggactcggactttgaaaaa
tcggactctgatgattctgagtcgggggtgagcgaggaagttagtgaatctgagaacgac
ggcaagcgtcgaagcactagatcttcaaagaaaaaggaagatgacaaacgaagttacaag
cagcagaaaaaaaagcgacgtaggattaaagttcaggacgactcctccagcaacgagaag
agcggaaaggaggaaggagagggagaggaagataacgaggaccaagatggggaagggcaa
aaaggccgaaaaaagattcgcaaaatcttgaaggacgacaagctgcgaacggagacgaga
gatgctctgaaagaagaggaggagaggaggaaacgtattgctgagagggaggcgcttagg
cagaaacttcgagaggtaattgttgtggaggaagcatcccaggtgacgtgtcctatcacc
accaagctggtgctggatgaggatgaagagaccaaagagccactggtgcaggtgcacagg
aaccttgtcacaaagctcaaacctcaccaggttgatggtgttcagtttatgtgggactgc
tgctgtgaatctgtyaaaaagattaagaagtctgcaggttctggctgcatcctggcccac
tgcatgggtctggggaaaactctgcaggtggtgacattcctccacacgctgctgctttgt
gaaaagcttgacttcagcacggctttagtggtttgtcccctcaacactgtccttaactgg
ctgaacgagttcgagaaatggcaggaaggattaaaggacgaggagagcttagaggtgacg
gagctggctactgtgaagaggcctcaggagcgagcgtacgccctcagcagctggcaggag
tctggcggtgtcatgatcatgggttacgagatgtaccgaaatttgacgcagggtcggaac
atcaagagcaagaagctgaaagaaacgtttcagaaaacacttgtagatccaggtccagac
ttggtgatctgtgatgaaggtcacatcctgaagaatgaagcttcagctgtttccaaagca
atgaattccatcaagacgaggaggaggattgttctgactggaacacctctacaaaacaac
cttattgaataccactgcatggtgaacttcatcaaggaaaaccttcttgggtcagttaag
gagttcagaaatcgtttcatcaatccaattcagaacggtcagtgtgctgattccacccta
cacgatgtgcggatcatgaagaagagggctcacattctctatgagatgctcgctggttgt
gtccagagaaaagattacacggcactcaccaagttcctgcctcccaaacacgagtacgtg
ttatcggtcagaatgactccgatccagtgtaagctctacagacactacctggagcacttt
acaggtgtggggaacgctttggaagggggccgaggccgcgcgggaacaaaactcttccag
gatttccagatgctgagcagaatctggacccatccctggtgccttcagctggactacatc
agtaaagaaaacaggggcttcttcgacgaagacagcatggatgacttcatcgcttcagaa
acggatgaatcctccatgagtttgacctctgaggatgagaagtccaaaaagaaaaagaag
caaggcaaaggaaaaaagaaggggtctgatgactcggacagcgatgacgtggaggtcatc
aaggagtggaacagcagctctcggggcaataaaggagaaggtcgaaacagaagagagccc
gttgaggaaccccaggactcgactccagcaagtccccgctccgctgactggcacaaggag
tttgtcactgatgctgatgctgagatcctggaacactctggaaagatgatgctgctcttt
gaggtcctgcgcatggcagaggaagtggaagataaagtgttggtgttcagtcagtctctc
atttctcttgatctgattgaagatttcttggagatgtcttgcaaaattgatgaagaagaw
agcaaacccactccatataaaggtgaaggcaagtggttcaggaacattgattattatcgt
ctggacggttccaccaacgctctcgccaggaagaaatgggccgaagaatttaatgatacc
agtaacacaagaggtcgtttgttcctcatttcaacacgagctggttcccttggcatcaat
ctggtggctgccaatagggtcatcatctttgacgcctcctggaacccctcgtacgacatc
cagagtatcttcagagtttatcgcttcggtcaggtcaaacctgtttacgtctacaggtta
cttgccgagggcacaatggaggagaagatctatgagcggcaggtaaccaagcagtctctg
tcataccgggttgtggaccagcagcagatcgagaggcactttaccatgaacgagctggct
gagctttacacctttgaaccagacacgctggatgatccgtcagggaagaagagcaagaaa
cctacacctgtacttcccaaggatcccatcctagctgagatgctgcagaacaataaggac
cagattgtgtgctatcatgaacacgactccctgctggaccacaaggaggaggaagccctc
agcgaggaggatcgcaaagctgcgtgggccgagtacgaagcagagaaaaagggtctgtcc
atgaggaccaaccacccattggcatacaatcagcccgacatgggcacctcaagctacttc
tcgttcaacatggcagcgttggcctccctgaacaaccagcagctggaggacctcataaac
ctcgggcgtcagaaagtcattgaagcaacaaattctttgaagtccttagttcgggagtca
ctggaagatataatagccagagtgtggaaggaaaacgcgtccctcacagagagtgaagtc
cagtctttagctttgaggcaccaagccaccgtggagatcgaggtcaagcgcagagaagct
gtttacagggacgttctcaccaagcagcaatctctgatgatgttcgtgcagaagctgatc
accaacaggaaggtgcaggagcagcagctggctattgctaaccaggcctcttacctgaac
cagctggccatgcagaatggcatggtggggtccggtgggctcagccacatggacatgatc
gggctgtaccagcgactgcacggcatgggcgcaaatcaaggcatgggcaagaaccccggc
ccctcaaacaacctgtag
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integrated database retrieval system
