Austrofundulus limnaeus (annual killifish): 106518062
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Entry
106518062 CDS
T06063
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106518062 (rlim)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106518062 (rlim)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106518062 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
zf-HC5HC2H_2
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
106518062
NCBI-ProteinID:
XP_013864614
UniProt:
A0A2I4BA24
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MEGSDSVEQGGSDQPESQRRRQLDRLDREEAFYHFVNNLSHEDYCLMRDNNLLGNPGEVT
EDELFNRLQQIKDGPEQQQNNNPGTESQEDPVEPPENSEDPPGGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEAIEQPPEVQEVV
ANPEPAVPMEAEVVEEPVVEEMAVIMEPEPELEEAVLPEVEREPPSPPAAQPEQPPPCSS
PRRGQRRARSRSPEPEPRRTRARLARSRSPLRLDQLDGLPNPRHLYTSQSPSSSTDAPSV
PQVEGSSRTRQHILSRQNLXEXDVHPSRADEEXVPEGQPVEPPEGESAGVEGGAAGRRPP
TIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNTFLYESERGGFRRTFTRSERAGVRTY
VSTIRIPIRRISDAGLGEATSMALQSMIRQIMAGFSELGYLMDSDSDSSDSNRGTGTPAD
LETLNNPEANNVDXPAADVDEQPVAAGVRGRTVETEMDEGLATGPQGSGGRARPRPLNNL
EETNSLGFFRLAHFFFLNDDDDDQPQGLTKEQIDNLSMRSFGESEALKTCSVCITEYAEG
NKLRKLPCSHEYHVHCIDRWLSENSTCPICRRTVLVSAN
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtgtcgagcagggtggcagtgaccagccagagtcacagcgcaga
aggcaactggatcgcctggacagagaggaggccttctaccactttgtcaacaatctcagt
catgaggactattgtcttatgagagataacaaccttctgggaaatccaggagaggtgaca
gaagatgagttgtttaatagacttcagcaaatcaaagatggtccagagcagcaacagaat
aacaacccaggcactgaaagtcaggaagacccagtcgaaccaccagaaaactctgaggat
cctcctggtggtgatagcctcctggactggcttaacacagtgcgccgcacaggcaacacg
accagaaccggccaccgtggaaaccagtcatggcgggctgtaagccagaccaacccaaat
agtggcgattttcgctttagtttggagattagtgtgaaccgcaatctggctgagcagcaa
gcagctgctgaaggggagcaggaggctatcgagcagccccccgaagttcaagaagttgtg
gctaatcccgaaccagcagttcctatggaggcagaagtagtggaagaaccagtggtagaa
gaaatggctgtcatcatggaaccagaacctgaactagaagaggctgttttgccagaggtt
gagagggaacctcccagcccacctgcagcccagccagagcaaccaccaccttgttcttct
ccacgaagaggacaaagaagagcccgcagccgtagcccagaaccagaaccacgcagaact
agggctaggttagccagaagtcgctctccgctscgtttggatcagcttgatggcctgcct
aatccacgacatctttatacttctcaaagccccagttcttccacagatgccccktctgtg
cctcaagtagagggcagttctcggactcgacaacatattctttcaaggcaaaacctayct
gaaaytgatgttcayccatcaagggcagatgaagaatrggtaccagagggccagcccgtc
gaacctccggaaggggagtctgctggggttgaaggtggcgcagcyggacgtcgtcccccg
actataatgctcgatcttcaggtgcgccgcgtgcggccaggtgaataccggcaaagggac
agcatcgccagtcggacccgctctcgctcccagaactcaaacacatttctttatgagagt
gagcgtggtggattccgcaggaccttcacacgctcagagcgtgctggcgtgaggacctac
gtcagcaccattcgaattcccattcgaagaatttcagatgcaggtttgggagaagcaacc
tcaatggctcttcagtcgatgatcaggcaaatcatggcaggctttagtgagctaggctac
ctcatggattcagactcagattcctcagattcaaaccgtggaaccggcacgcctgcagac
ttggaaaccctcaacaacccagaagcaaataacgtagacycccctgctgctgatgtggat
gaacaaccagttgccgctggagtcagagggaggacagttgagaccgagatggatgagggc
cttgccactgggcctcaaggttctggtggcagggcacggcccagacccctgaacaacctc
gaggagaccaactcactgggtttctttcgacttgctcatttcttcttcctgaatgatgac
gatgacgaccaacctcaggggctgactaaagagcagatcgacaacctctccatgcgcagt
tttggcgagagtgaagccttgaagacctgtagtgtctgtataacggagtacgccgaagga
aacaaactccgtaagcttccgtgctctcacgagtaccacgtgcactgcatcgaccgctgg
ctttctgaaaactccacgtgtcccatctgccgcaggactgtcctggtctcagccaactga
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