Austrofundulus limnaeus (annual killifish): 106518796
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Entry
106518796 CDS
T06063
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106518796 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106518796 (taf5)
03036 Chromosome and associated proteins [BR:
alim03036
]
106518796 (taf5)
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106518796 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
106518796 (taf5)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106518796 (taf5)
STAGA complex
106518796 (taf5)
TFTC complex
106518796 (taf5)
SAGA complex
106518796 (taf5)
SLIK complex
106518796 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD_LRWD1
WD40_like
PROPPIN
CDK5RAP3
Beta-prop_WDR11_2nd
LisH_PAC1
VPS8_N
RAB3GAP2_N
LisH
Motif
Other DBs
NCBI-GeneID:
106518796
NCBI-ProteinID:
XP_013865661
UniProt:
A0A2I4BD42
LinkDB
All DBs
Position
Unknown
AA seq
749 aa
AA seq
DB search
MAAVQGGLVDTKDEVDVKTEPASDGFGNNTANDSRLLSAPPGSSTAVGNNKPAAGTPEEQ
QTLLAVLQFLKKNKLSESAEILRREAGLPEDALDLKGTDASGSGQGGAAGSVDTEGGNAN
ALLSRVTVSASAGVQAPTKAVGEDQPDVSVVLSAYSQQGDPALYDVYYSSLKKFIESVLD
CHRAELSQVFYPLFVHMYLELVYNNHESEAKAFYEKFSGDQECYYEDDLRVLSSLTKKEH
MRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKS
QIDAMSGSLAGEARREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDNV
GSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKKIRLGPDLLPSICFYTFLNAY
QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKTAADLNLIDKESDDVLERIMDE
KTASESKILYGHSGPVYGISFSPDRNYLLSSSEDATIRLWSLQTFTCLVGYKGHNYPVWD
TQFSPHGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADITCTRFHPNSNYVATGSSDRT
IRLWDVLTGNCVRIFTGHKGPIHAITFSPNGKFLASGATDGRVLLWDIGHGLMVGELKGH
TDTIYSLRFSRDGEILASGSMDNTVRLWDAMKAFDDLETDDFTAATGHIHLQDNSQELLL
GTYTSKSTPVVHLHFTRRNLLLAAGAYNP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacagggaggtctagtcgacacgaaagatgaagtggatgttaaaacagaa
ccagcgagcgatggcttcggaaataacaccgccaacgacagcaggctgctttctgcaccc
ccgggctccagcaccgcggttgggaacaacaaacctgcggcggggacccccgaggagcag
cagacgctgctggcggtcctgcagttcctcaaaaagaacaagctgtcagagtccgcagaa
attttgcgccgtgaagcgggcttaccggaggatgctctggacctgaaaggcacggacgcc
agcgggtcgggacagggaggcgctgcgggaagtgtggacacggaaggcgggaatgcgaac
gctcttctcagccgggtgaccgtctctgcctccgccggagttcaggcaccaaccaaggca
gtcggagaggatcagccagatgtcagcgtggtgctgtcagcctacagccagcagggagat
ccagctctgtatgatgtttactacagcagcctgaagaagttcattgaatcagttttggac
tgccaccgagcagaactgtctcaggtcttctacccgctgtttgtccacatgtacctggag
ctggtgtacaacaatcatgaaagtgaggccaaggccttttatgaaaagttcagtggggac
caggagtgctactatgaggacgacctgcgtgttttatccagcctaacaaagaaggagcac
atgagaggcaacgagaccctgctggacttccgcaccagcaagtttgtcctacgcatctcc
cgcgactcctaccagctgctgaagagacacctgcaggagcggcagaacaatcagatatgg
aacatcatccaggagcacctctacatcgacatcttcgatgggatgccgcgcagcaagagc
cagatcgatgccatgtcgggcagcttggccggagaggccaggcgggaagctaataaggct
aaggtttactatggcctgctaaaggagccagaaatcgagctgcctcttgatgatgaggat
gaggaggcagagaatgaggagggtaaacccaagaagaaaaagcccaaaaaagacaacgta
ggctccaaaagcaaaaagcaggatccaaatgctccttcgcagactaggatacctctgccg
gagctcaaagactctgacaagctggacaagatcatgtacatgaaggaggccaccaaaaag
attcgcttaggaccagatctcctcccttccatctgcttctacacttttctcaatgcatac
cagggtctgactgcagtggacttcacagacgattccagcctgatcgccggtggcttcgct
gactccacagtcagggtgtggagcgtcacgcccaaaaagctccgtaaagtgaaaacagcc
gcagacttgaacctgattgacaaagagtcagatgatgttttagagaggattatggatgag
aagacggccagtgagtcaaagattctttatggacacagtgggccggtgtatggcatcagc
ttcagcccggacagaaattaccttttgtcgagttctgaggatgctaccatccggttgtgg
agtctccaaacgtttacttgtctggtgggctacaaaggtcacaattacccrgtgtgggac
acgcagttttcacctcacggttattattttgtctcggggggacacgaccgggttgcccgc
ctttgggcgacagatcattaccagccgctgcgaatatttgcaggccacctggctgacatc
acctgtacccgcttccacccgaactcaaattacgtcgccacggggtcgtctgaccgcacc
atccgcctctgggacgtcctgactggaaactgtgttcgcatcttcactggtcataagggt
ccgattcatgccattactttctctcccaatgggaagttcttggcctccggagccacagac
ggaagagttcttctgtgggacatcggtcatggattgatggttggsgagctgaagggtcac
acagataccatctattccctcagatttagcagagacggagagattcttgcatctggttct
atggacaacacggttcgcctgtgggatgccatgaaagcatttgatgatttagagactgat
gatttcacagcagctacaggacacatccatctacaagacaactcgcaggagcttttgctt
ggcacgtacacatctaaatcaacgccggtggtacacctacacttcacacggaggaacctg
cttctggctgcaggagcgtacaatccatga
DBGET
integrated database retrieval system
