Austrofundulus limnaeus (annual killifish): 106518830
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Entry
106518830 CDS
T06063
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106518830
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Protocadherins
106518830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
106518830
NCBI-ProteinID:
XP_013865701
UniProt:
A0A2I4BD82
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MIWLIFILFILNGAFCQLHYSVPEEQEPGTVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALLVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDINDNPPSF
PETDISVEISESAIPGTRFPVENAFDPDVGSNALSTYAITNNNFFYLDVQTQSDGNKFAE
LVLEKPLDREQQAVHRYVLTAVDGGIPQRTGTALLVVKVLDSNDNAPTFYQSVYTVNLRE
NSPVGTLVIQLNATDVDEGSNGEIVYSFSSHNTPRIKDLFNIDARTGRIEVAGEVDYEES
NTHQIYVQAKDLGANAVPAHCKVLVKLLDVNDNTPEIGFSTVTESVSEQDAPGTVIALFS
VSDRDSSENGQMSCEILGDVPFKLKSSFKNYYTIVTDGSLDRENTASYEITVVAKDKGMP
SLATSKSITVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECTIQAMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGAVELFSNATVNV
IIVDQNDNAPTVIAPIGKNGTAKEHLPRSAEPGFLVTRITAIDADDGENARLSFSIQRGN
EMGMFRMDWRTGEIRTARRVSPKRDTQGFYDLLIEVRDHGQPPLSSSASVSVILVDSVVD
GRSERGSASKSKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAGD
CCLCCGSCCSRQTRGRKQKKLSKSDIMLVQSTNVTSGVGPVGQVPVEESGVGGVGGGFGS
HHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSTDTDHTNPCGAIVTGFSDQTPDIIS
NGSILSSETKHQRAELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRG
HSTGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVPS
SVNLSDQLTMTSSTASSNDRSFSTFGKDGQRSQSHHSLQNHLHQQQQQYSSSTLERKEYD
RGTLPYKPTFLCEYQYETSMGPYDFGMVPYRY
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttaatattcattcttttcatcctgaatggagctttctgtcagcttcactac
tccgtgccagaggagcaggaacctggcactgtggttgggaatatcgcagaggatttgggg
ctggacattactaaactttccgctcggcgtttccaaacggtgcccagttcacggacaccg
tatctggaggtaaacttagaaaacggtgcgcttttggtgaaggagaaaattgaccgggaa
gaaatctgtaagcagaccatcccgtgcctattgcacctggaggtgtttctggaaaaccca
ctggagctctttcgtgtggagatcgaggtgatggatatcaacgacaatccgcccagcttc
ccggagaccgacatttctgtggaaatatccgagagcgcaattcccgggacgcgtttcccg
gtggaaaacgccttcgacccggacgttggctcaaacgcgctcagcacatatgccatcacg
aataataactttttctaccttgatgtgcagacgcagagcgacgggaacaaattcgcagag
ctggtgctggagaagccgctggacagggagcagcaggcggtgcaccgctatgtgctgaca
gctgtggacgggggcatcccgcagcggaccgggacggctctcctggttgttaaagttctg
gactctaatgacaacgcacccacgttttaccaatctgtgtacaccgttaacctgagagaa
aactcacccgtgggcactctagttatccagctgaatgccacggatgttgacgagggatca
aatggggaaatcgtttattctttcagcagccacaacactccgcggataaaagacttgttc
aacattgatgccagaaccggcaggatagaggtggcaggtgaggtggactatgaagagagc
aatacgcaccagatttatgttcaggctaaagatctgggagcgaacgccgtgccagcgcac
tgcaaagtgttggtcaaactcttggatgtgaatgataacacgccagagattggtttcagc
accgtgacagagtctgtgagcgagcaggacgcccccggcaccgtgatcgcacttttcagc
gtctcggatcgagactccagtgagaacgggcagatgagctgtgagatactgggtgacgtt
ccttttaagctgaaatcatcttttaaaaactactacaccattgtgacagacggctcatta
gacagagagaacacagcttcgtatgaaatcactgtggtggccaaagataaaggtatgcct
tcacttgcaaccagcaaatccattacagtgcacgtctccgacgagaacgacaatgcgccc
cgttttacgcaggctgtttatgatgtgtatgtgactgagaacaatgttcctggtgctttc
attcacgctgtgagcgctttggaccctgatataggacagaatgctttaattacctactcc
atattggagtgtacgatccaggccatgtctgtggacacatatgtttccataaaccaggac
actggatacctttatgcgctgcgctcttttgattacgagcagctgaaggagttcagtttc
atggtccaagctaaggattctggtgctgtggagctcttctctaatgccactgttaatgtt
atcatagtcgaccagaatgataatgctcccactgtcatagcccccatcgggaaaaacggc
acagccaaagagcatctcccgcgctctgcagagcctggattcctggtgacgcgcatcacg
gccatagacgcggatgatggcgaaaacgcacgcctgtctttcagcatccagcgtggaaac
gagatggggatgttccgtatggactggagaactggagagataaggactgcacgcagggtg
tctccaaagcgcgacacccagggcttttacgacctgctgattgaagtgagggaccatggg
cagcccccgctctcctcctctgccagtgtgagtgtaattttagtggacagtgttgtagac
ggccgcagtgagcgtggatcagcctccaagtctaaggagacctcccttgacctcaccctc
attctcattatcgccctgggctctgtttccttcattttcctgctggcaatgatcgtgctg
gcagtgcgctgccaaaaggacaaaaagctcaacctgtacacctgcctgctggccggtgac
tgttgtttgtgctgtggytcgtgctgcagcaggcaaactcgtggcaggaagcagaagaaa
ctaagtaaatctgacatcatgttggttcagagcaccaatgtgacatcaggagttgggccc
gtgggacaggtgccagtggaggagtctggggtgggaggcgtgggtggtgggttcgggtcc
caccaccaccagaatcagaactcctactgctaccaagtgtgtctgacaccagagtcggcc
aaaacagatctgatgttcctcaagccttgcagcccctcccgcagcactgacacagatcac
accaacccctgcggagccattgtcactggtttcagtgaccagacacctgacatcatatcc
aatggcagcattctatccagtgagacaaaacaccaacgagcagaactcagctatctggtg
gacagaccaagacgtgtcaacagttcagcttttcaagaagcagacctcgtcagctccaaa
gacagcggtcacggcgacagcgagcagggcgacagcgaccacgatgccacaaaccggggt
cattcaaccggtgctgacctgttctccaactgcacagaggaatgcaaggccctgggtcac
tccgaccgctgctggatgccgtcctttgtgccatcagatgggcgccaggggccggactac
cgcagcaatctgcacgtccccggcatggatgccacactgcccgacactgaggtaccctcc
tccgtcaacctctccgaccaactcaccatgacctcctctaccgcctcgtccaacgatagg
tcattctccacttttggcaaggacggccaaagatcacagtcacaccacagccttcaaaat
cacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagagtatgat
agggggactctaccgtacaaaccaacctttctctgtgagtatcagtatgaaacgtcaatg
ggaccctatgactttggtatggtcccatacagatactaa
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