Austrofundulus limnaeus (annual killifish): 106518862
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Entry
106518862 CDS
T06063
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106518862
03036 Chromosome and associated proteins [BR:
alim03036
]
106518862
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
106518862
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
106518862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
TFIIF_alpha
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
DUF7479
zf-C2H2_ZN142
Zn_ribbon_DUF2089
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
106518862
NCBI-ProteinID:
XP_013865740
UniProt:
A0A2I4BDC2
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSN
LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRH
RRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRT
HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH
SFIETGKKCRYCDAVFHERYALIQHQKSHKNEKRFRCDMCDYCCRQERHMVMHRRTHTGE
KPYACSQCEKTFRQKQLLDMHFKRYHDPNFVPTAFVCPKCNKTFTRRNTMARHSENCSGE
VEDAENGGLSPKKGRRGRKKKMRSRRDEDDSEDDQPEAEEDDDDEGMEEAALLQEEDEPE
GMELDQAPAAIPVPAPDEPPVKRKRGRPPKNPPKPPTPSKLMKTAVLSPAADAAIIQDED
EGTEAVEDMVLKKEEEEEDPAGGVTLTVEEGVSGDVGVETVELSVSEETAAAAANGDLTP
EMILSMMDR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcagtgtctatgattttgaagaggaacagcaggagggtcttttgtctgaggtt
aacgcagagaaggttgttggaaacatgaagccgcccaaacctaccaagatcaagaagaaa
ggagtaaagaagacgtttcagtgtgagctctgcagctacacgtgtcctcgtcgctccaac
ctggaccggcacatgaagagccacaccgacgagagacctcacaagtgtcacctgtgtgga
agagccttcaggacggtgactctgctgcgaaaccacctcaacacacacacaggaactcgg
ccacacaaatgcacagattgtgacatggctttcgtgaccagcggagagctcgttcgtcat
cgtcgctacaaacacacacacgagaaacccttcaagtgttccatgtgcgactacgccagt
gtggaggtgagtaaactgaagcgccacattcgttcccacactggtgagcgtccgttccag
tgcagcctctgcagctatgccagcagagacacgtacaagctgaagagacacatgaggaca
cactcaggagagaaaccttacgagtgctacatctgccacgcccgattcacccagagtggg
accatgaagatgcacattctgcagaaacacacggagaatgtggccaaattccactgccca
cactgcgacacggtcatcgcacgcaagagtgacctgggcgtgcatcttcgcaagcagcac
tcgttcattgagactggaaagaagtgtcgttactgcgacgccgtttttcacgagcgctac
gctctgatccagcatcagaagtcccacaagaatgagaagaggttcaggtgtgacatgtgt
gactactgctgccgccaggagcgccacatggtaatgcatcgccgcacccacactggagag
aaaccgtacgcatgcagccagtgtgagaagaccttcagacagaagcagctcctggacatg
cacttcaaacgctatcatgaccccaactttgtccccactgcttttgtttgccccaagtgt
aacaagacgttcacacgcaggaacaccatggctcgccactcagagaactgcagtggggaa
gtggaggatgcagagaatggaggtctgagcccaaagaaggggaggcgaggaagaaagaag
aagatgaggagcaggagagatgaagacgacagcgaggacgaccagcctgaagcagaggag
gacgacgacgacgagggcatggaggaagctgcgctgctacaggaagaggatgagcctgaa
ggcatggaactggatcaagcccccgctgccatccctgtgcccgctcccgatgagccgccg
gtgaagaggaaacgaggccgacccccaaagaaccccccgaagcctccaacacccagcaag
ttgatgaaaactgccgtcctgtcacctgctgctgacgctgccatcattcaggacgaggac
gagggcaccgaggcggtggaggacatggtcctgaagaaggaggaggaggaggaggacccg
gcggggggcgtgaccctgactgtggaggagggggtgtcgggtgacgtcggggtggagact
gtggagctttctgtgagtgaggaaacagcagcagctgctgccaacggagatttaacacct
gagatgattctgagtatgatggaccggtga
DBGET
integrated database retrieval system
