Austrofundulus limnaeus (annual killifish): 106519096
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Entry
106519096 CDS
T06063
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106519096 (lrp4)
Membrane trafficking [BR:
alim04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
106519096 (lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
DUF5050
EGF_CA
Motif
Other DBs
NCBI-GeneID:
106519096
NCBI-ProteinID:
XP_013866077
UniProt:
A0A2I4BEA9
LinkDB
All DBs
Position
Unknown
AA seq
1920 aa
AA seq
DB search
MQLAAVLRGVLLLASLLLSQSPGVHGNADCSCGRNHFTCAVSAFGECTCIPAQWQCDGDN
DCGDHSDEDGCMLPTCSPLDFHCENGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEF
QCLNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCTDGSCIAEHWYCDGDKDCKD
ESDEENCPSDVMTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVE
FMCSSGMCINSGWRCDGEHDCDDQSDEKNCTTSMCMADQFRCGTGRCVRLSWRCDGEDDC
SDRSDEEGCEKTESPPCAPDQFQCGNGRCIGQRKVCNEINDCGDGTDEHPHHDCRPRSSE
DNCNQNNGGCSQKCQMVRGLVQCTCHTGYRLTDDGKTCLDVDECAEEGYCSQGCTNTEGG
FQCWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDF
HHNLELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRI
EVANLDGTHRKVLLWQNMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRRVIADT
HLFWPNGLTIDYASHCIYWVDAKHHVIERADLDGRNRKAVISQGLPHPFAITVFEDSLYW
TDWHTKSINSANKFTGKNQEVIRNKLHFPMDIHTLHPQRQPAGGRNRCGTNNGGCSHLCL
PSNKTFTCACPTGFKKVDHYSCSISLDKFLLFARRTDIRRISFDTKDMSDDVIPLADVRN
AVALDWHDKDGYIYWTDVTTDSINRALWNGTKQEVVVDTSLESPAGLAIDWVTNKLYWTD
AGTDRIEVSNADGSMRTVLIWENLDRPRDIVVDPTGGFMYWTDWGANPKIERAGMDASNR
IVIISSNLTWPNGLAIDYETKRLYWADAGMKTIEFGNFDGSDRQVLIGSQLPHPFGLTVH
EDKLYWTDWLSKSIHSADKLTGLERHTLAENLENLMDIHMFHRHRETVHNPCAVNNGGCS
HLCLLAPAPKASSCSCPTGINLQSDGKTCTPGMNSFLIFARRTDIRMVSLDIPYYADVVL
AVNSSMKNTIAISVDPKEGKVYWSDSTLKKISRSNINGSAHEDIISTGLMTTDGLAVDAV
GRKIYWTDTGTNRIEAANLDGSMRKVLIWQNLDSPRAIALYHEMGYMYWSDWGEHAKLER
SAMDGSXRVVLISNNLGWPNGLAIDTAGSQLLWADAHTERIEASDLNGQNRRTLVTPVQH
PYGLTLLGSHIYWTDWQSRSIQRADKNSGANTITVRANLPGLMDIQAVDREKPMGFNKCS
KRNGGCTHLCLPRPNGTSCACPTGILLKGDGRSCEDSPETYLLFSNRVSVRRISLDTSDH
TDVHVPVPELHNVISLDYDSVDGKLYYTDVTLDVIRRANLDGSEMETVISQGLKTTDGLA
VDWVSRNMYWTDTGRNTIEVARLDGSSRKVLVNNSLDEPRAIAVFPSKGFLFWTDWGHIA
KIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGKLRQVLVS
PVSHPFALTQSKPVSSPLTPFSRLSQQDRWIYWTDWQTKSIQRVDKHTGRNKETVLANVE
GLMDIIVVSPHRQTGSNLCGVNNGGCTHLCFAKTNSFVCACPDEPDGRPCSTISGYIPTS
PAKGASSTPVPKKIPKTPTDTPHRGPPLVNCTDRNLNAEGCLSTVVTAPHGEGLHISYVI
GGVLTILAILILIAAFIIYRHKKSKFAEPGVSNLTYSNPSYRTSTQEVKIEASQKPPIYN
QLRYKKEGGVDGGYTKEKIRIVEGVCLLSSEELYWDDLKQIKPSRGGLHTCMRTDTVSLQ
ASSASLDDGETEQLLQEEASECSSITTLTPSAITPQRHAQHSLPDTGWASIRKPSTESEV
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgcagctggccgcggtgctgcggggcgtcctcctcctggcaagtttgctgctcagccag
agtccaggtgttcacggcaacgctgattgttcctgtggaagaaaccacttcacgtgcgcc
gtcagtgcttttggggagtgtacctgcattcctgctcagtggcagtgtgacggagacaac
gactgcggagaccacagtgatgaggacggatgcatgctccccacctgctcgccgctggac
ttccactgtgagaacggcaaatgcatccgtcgctcctgggtctgtgacggagacaacgac
tgcgaagacgactccgacgagcaagattgccctcccagggagtgtgaagaggacgagttc
caatgcctaaacggctactgcattcgcagcctctggcactgcgatggcgacaacgattgt
ggagacaacagtgatgaacaatgtgatatgcgtaaatgttcagataaagagttccgttgc
acagatggaagctgcattgctgaacactggtattgtgacggagacaaagactgcaaggat
gaatccgacgaggaaaattgcccctcagatgtgatgacagctacctgcagtgtggaggag
ttccagtgtgcatatggccgctgtatcctggacatctaccattgtgacggagatgatgat
tgtggagactggtcggacgagtcagactgctcttcccaccaaccctgcaggtcagtagag
ttcatgtgcagcagtggcatgtgcatcaactctggctggaggtgcgacggcgaacatgac
tgtgacgaccagtcggacgagaaaaactgcaccacatccatgtgcatggccgaccagttc
cgctgtggaactggccggtgtgtccggttgtcatggagatgcgatggtgaagacgactgc
tcggatcgcagcgatgaagagggatgtgagaaaactgagagtcctccttgtgctcctgac
cagttccagtgtgggaatggacgttgtattggtcagaggaaggtgtgtaacgagattaac
gactgtggtgatgggactgatgagcacccacatcacgactgccggccacgctcaagcgag
gacaactgtaaccagaataacggaggctgctcccagaagtgtcagatggttcgaggactg
gtccagtgcacctgtcacaccggataccgactgacggacgacggcaaaacctgcctagat
gtggatgagtgtgcagaagaaggatactgcagtcagggctgtaccaacacagaagggggg
ttccagtgctggtgcgtgcagggctatgagcttcgacccgacaagcgcagctgcaaagct
ctaggtccagagccagtgctgctgtttgccaatcgcatcgacatccgtcaagttttgcca
catcgctctgaatacaccctactgctcaacaacctggaaaacgcgatcgctctggacttc
catcacaacttagagctggtcttctggtcggatgtgacgttggaccgcatcatgaaggcc
aatctaaatggctctaatgtggaggaggttgtctccactggtctggagagcccaggtgga
ctggctatagactggatccatgataagctttactggacagactccggaacatcccggatt
gaggtggccaatttggacggaacacaccgtaaggtgttactgtggcagaacatggagaag
cccagagccattgcactgcaccccatagaagggaagatctactggacggactgggggaac
acgcctcgcatcgagtacgccaacatggacggctcaaaccggcgagtcatcgcagacacg
cacttgttctggcccaacgggctcaccattgattatgccagccactgcatatattgggtg
gacgccaagcatcatgtcatcgaaagagctgacctggatggacgcaaccgcaaggccgtc
atcagccaaggcctgcctcatccatttgccatcacagtgtttgaggacagcctctactgg
accgactggcacaccaagagcataaacagcgccaacaaattcaccggcaagaaccaggag
gttatccggaacaagctgcacttccccatggacatccacaccctgcacccacagcgacag
cctgcaggtggcagaaaccgctgtggcaccaacaatggaggttgcagccatctgtgtctg
ccaagcaacaaaaccttcacctgcgcctgccccaccggcttcaagaaagtggaccattat
agctgttccatcagtcttgacaagttcctgctttttgcccgaaggacggacatccgacga
atcagctttgataccaaggacatgtccgatgatgtcatccctctggctgatgtgcgcaac
gctgtggcactggactggcacgacaaagacggctacatttactggaccgacgtcacaacc
gactccatcaacagagcactgtggaatggcaccaagcaggaggtggtggtggataccagc
ttggagagcccagcaggattggcaatcgattgggtgaccaataaactctactggaccgat
gcaggtacagatcgtatcgaggtttcaaatgctgatgggagcatgcggactgttctgatt
tgggagaacctggatcgacccagagacattgtagtcgacccaactggaggcttcatgtac
tggactgactggggtgccaacccaaagattgagcgcgcaggaatggacgcttcaaatcgc
atcgtcatcatttcatccaatctracatggcccaacggacttgccatcgactatgagacc
aaacgtctgtactgggctgatgcaggcatgaagactattgaatttggaaactttgatggt
tcagacagacaggttttgattggcagccagctgcctcacccttttgggctcactgtacac
gaagacaagctgtactggaccgactggttatccaagagcatccacagtgccgacaagctc
acgggtttggagcgccacacgctggctgagaacttggagaatctgatggacattcatatg
ttccatcggcaccgcgagacagtgcacaacccgtgtgcagtcaataatggaggctgtagc
cacctctgtctcctggcacctgctcccaaggcttctagctgctcctgtcccactgggatc
aacttgcaaagcgatggaaaaacctgcacacctgggatgaacagcttccttatctttgct
cggaggacagacatcaggatggtttctttggatattccctactacgctgatgtggttcta
gcggtcaatagctcaatgaaaaacactattgccatcagcgttgaccccaaagaaggaaaa
gtctactggtctgacagtacactgaagaaaatcagcagatccaacatcaatgggtcagca
cacgaagacatcatatctacaggattgatgaccactgatgggctggcggtggaygctgtc
ggcaggaagatctactggactgacacaggaaccaaccgtattgaagcggccaacctggat
ggttccatgaggaaggttctcatttggcaaaaccttgatagcccacgagcgattgccctc
taccatgagatgggttatatgtactggtcggactggggtgagcatgcaaaactggagcgc
tcagcgatggatggatcggawcgtgtggtcctcataagcaacaacctgggctggcctaat
ggcctggctattgatacggctggatcacagctactgtgggctgatgctcacactgagcgc
attgaggcatctgaccttaatgggcagaatcgtcgcaccctggtcactcctgtccagcac
ccatatggtttaactcttttgggttcccatatctactggactgactggcagagccgcagt
atccagagagcggacaagaactccggagccaacaccatcacagtacgagccaatctgcct
ggcctgatggacattcaagctgtggacagggagaagccaatgggttttaataaatgtagc
aagaggaacggcggttgcacccacctctgcctgcctcgtcccaacggcacttcctgtgcg
tgtcccactggcattctgctcaagggagatggcaggtcgtgtgaggactcccccgagacc
tacctgctcttttcgaatcgcgtcagcgtgcgcagaatctccctggacaccagcgaccac
accgacgtgcacgtgcctgtgccagagctgcacaatgtcatctcacttgactacgacagc
gtagatggaaaactttactacacggacgtcaccctggatgtgatcaggcgggcgaatctg
gatggcagtgaaatggaaacagtaatcagtcarggtctcaagaccacagacggcttggct
gtcgactgggtgtccagaaacatgtactggactgatactggacgcaacaccattgaggtg
gcccgcctggatggatcgagtcgcaaagtcctggtgaataacagtttggatgaacctcga
gccattgcagtgttcccaagtaaagggtttctgttctggaccgactggggacacattgca
aagatcgaacgctctcaccttgayggatcagaccgcaaagttctgatcaacacggacctg
ggatggcccaacggtcttactttagactacgacacacgaaggatcttctgggtggacgcc
cacttggaccggatcgaaagctccgatctgaacgggaaactgcgccaggtcctcgtcagt
cccgtgtcccacccgttcgccctcacgcagtcgaagccggtgtcctcccctctaactcct
ttctcccgactctcgcagcaagaccgttggatctactggacggactggcagacaaagtcc
atccaacgagtggataagcacactggccggaataaggaaactgtgctggccaatgtggag
gggctcatggacattatagtggtctctcctcacaggcagacaggttctaacctctgtgga
gtaaataatggtggatgcacccacctctgctttgccaagaccaacagttttgtttgcgcc
tgcccagatgaaccagatgggcgaccctgctccacaatttcaggctacatcccaacctct
cctgccaaaggtgccagcagcaccccggtacccaaaaagatccccaaaactccaaccgac
accccacacagaggacccccwctggtcaactgcactgacaggaacctaaatgcagaaggc
tgtttgagcacagtggtaacagcccctcatggagaaggccttcacatcagctatgtgatt
ggtggagttctcaccatcctggccattctcatcctcatcgctgctttcattatttacaga
cacaaaaagtccaagtttgctgaaccgggagtgagcaatctgacctacagtaacccctcg
tatcgaacatccacacaagaggtgaagatcgaagcgtcacagaagcctccgatctacaac
cagcttcgatataagaaagaggggggagtggacggaggctacacgaaggagaagatccgc
atagtggagggggtgtgcctcctgtccagcgaagagctttactgggatgacctaaaacaa
atcaagccgtcccgcggcggcctgcacacctgcatgcggaccgacaccgtgtccctgcag
gccagcagcgcctcgctcgacgacggcgagaccgagcagctcctccaggaggaggcgtcc
gagtgctcctctataaccacgctgaccccctcagccatcaccccgcaacgtcacgcccag
cacagcctgcccgacaccggctgggcctccatacgcaaaccctccactgagagcgaagtg
tga
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