Austrofundulus limnaeus (annual killifish): 106519426
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Entry
106519426 CDS
T06063
Symbol
dhx36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106519426 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106519426 (dhx36)
03012 Translation factors [BR:
alim03012
]
106519426 (dhx36)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106519426 (dhx36)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106519426 (dhx36)
Translation factors [BR:
alim03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
106519426 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
AAA_16
TsaE
NPHP3_N
DUF4211
Motif
Other DBs
NCBI-GeneID:
106519426
NCBI-ProteinID:
XP_013866564
UniProt:
A0A2I4BFP4
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MSYGYGGGGRGGRRGRRGGRGYRDGSREKMDRGVEDWGHSGSSDFDQDRGGGDGQKDRPP
PHLRGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREEHITKLLNSVQNDQPGPRRDGR
NARASQSDNWQTDANHSGHCYFDGDLPEEEKHKAEVKSEEEEEVIPGQKKKSHTSKRDLS
KAAVKDEPPDNWDEDDQEEEKKEEKPLRKDKDLEFLFQEVVRDSSMDEYLKRDLHSKESE
SKYKEMLNFRKKLPSYGKKEELVELINSNRVLVVSGETGCGKTTQVTQFILDNHINRGVG
STCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGI
ILQWLRSDPLLSSISHLVLDEIHERNLQSDVLLVIVXNLLKIRNDLKIVLMSATLNAEKF
SKYFDNCPMIHIPGLTFPVEEFLLEDIIDMTRYRPQSEDRRSAWKKSFWQGRNSRPEKEE
KELEYKESWPCYARTLQGRYSDSTIQALEMLDSDEKIDLDLILALIRHIVLNEGEGAILV
FLPGWDNISGLNDLLMAQQMFRSDNFVIIPLHSLMPTVNQTQVFKRPPPGXRKIVIATNI
AETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYH
LYNGLRASLLDAYQLPEIMRTPLEELCLQIKILKLGSIGRFLEKALDPPTEKAVGLAIKN
LTDLNALDHTENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFI
PLGKEKIADMRRRVLSRNSKSDHLTIVNAFKGWEEAKRRGARYEKDFCWDNFLSANTLQM
LHNMKGQFAEHLMHAGFVSSSDPKDPQSNINSDNEKLIKAVIVAGLYPKVAMIRPSFSKK
RPGVKVYTQXDGKVCIHPKSVNAEEKEFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFF
GGDITIQKDQDQETIAVDQWIVFRSPARIAHLVKSLKKELDSLLEEKISNPAPVDWNNRQ
SKDCAVITAIIDLITTQEKPTGGSKNYDRTWASAPRGKHMYFNDEDDDDDD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgggtacggaggtggaggaagaggtggaagaagaggcagaagaggaggtcgc
ggctacagggatggcagcagagagaaaatggacagaggggttgaagactggggacacagc
ggtagttccgactttgaccaggaccgaggaggaggagatggtcagaaagaccgtcctcct
ccacatctgaggggccgtgagattggtctgtggtatgcccgatacggagccgtgaggagg
aaacaagcagaccggagatcgcgggcagtggtccagatggatgaggcgagggaggagcac
attaccaagctgcttaactctgttcagaatgaccagcctggcccaaggcgagatggcagg
aatgcaagggcctctcagtctgacaactggcaaacagatgctaatcatagtggacactgt
tactttgatggtgatttgcctgaagaagagaaacacaaggctgaagtaaaatctgaggaa
gaggaagaagttattccaggacagaagaaaaagagtcacacatccaaacgtgacttatct
aaagcagcagttaaagatgagccaccagacaactgggatgaagatgatcaagaggaggaa
aagaaggaggagaaacccctgaggaaagacaaggatctggagtttttgtttcaggaagta
gtcagagacagttcaatggatgagtacttaaaaagagatctgcacagcaaggaatctgaa
tcaaaatacaaagaaatgcttaatttcaggaaaaaactgccatcctatggaaaaaaagag
gagctcgttgagctaatcaactctaatcgtgtcctagtggtgagtggggagactgggtgc
ggaaagaccactcaggtcactcagttcatcctcgacaaccacatcaacagaggcgtgggc
tcgacrtgccgcgtggtgtgcacgcagccccgtcgcatcagtgccatttcggtagcagag
cgtgtagctgcagagagagcagaaagtgtggggaatggaaattcttgtgggtaycaaatc
cgcctgcagagccgattaccacggagacaaggttcaatcctgtattgtacaacaggcatt
attcttcagtggctgcgttcagatccgttgttgtccagtataagtcacctggtgttggac
gaaatccacgagaggaaccttcagtcagacgttttgctcgtcatagtgargaatttgctc
aagatccgaaatgacctcaaaattgtcctcatgagcgccacgctcaatgcagagaagttc
tctaaatattttgacaactgtccaatgatccacattcctggtttgacattcccagtggaa
gagtttctgcttgaagacattattgatatgaccagatatcgtcctcagagtgaggatcgt
cgctccgcatggaagaaaagcttttggcagggtcgcaactcaaggcctgagaaggaggag
aaggagttggaatacaaagagagctggccctgttatgcacgcactcttcagggcaggtac
tctgacagcacaattcaggccctggagatgttggacagtgatgagaagattgatctggac
ctgatcctggcactgatccgtcatattgtgcttaacgagggggaaggtgctatcttggtc
ttcctgccaggttgggacaacattagcggtcttaatgacttgttaatggctcagcagatg
ttccgatcagataattttgttatcatcccgttgcactcgctcatgcctactgttaatcag
acacaggtattcaaaagacctccacctggcrtcagaaagatcgtgattgctactaatatt
gccgagaccagcatcaccatagatgacgttgtttatgtgatcgacggaggcaagattaag
gagaccaacttcgacacaaacaacaacatcagcacgatgacagctgagtgggtcagcctg
gccaatgccaaacagaggaaaggacgtgcgggcagagtgcaaccaggaaagtgctaccac
ctgtacaatgggctyagggccagtcttctggatgcctatcaattacctgaaattatgagg
acaccgctggaggagctctgcctgcagataaagatattgaagctcggatccataggtcga
tttttggaaaaagctctggaccctcccactgagaaggctgttggcctcgccatcaagaac
ctcacagacctgaacgccttggaccacacagagaacctgacagcactgggtttccacctg
gcccgtctgcctgtggagccccacattggcaaactcatcctgtttggagccctgttggga
tgcctcgacccagtactcaccatcgccgcttcgctcagcttcaaagaccctttcttcatc
cccctgggcaaagaaaagatagcagacatgagaagaagagttctgtccagaaactctaaa
agtgatcatctcactattgtcaacgccttcaagggctgggaggaagctaaacgacgtggt
gccaggtatgagaaggacttctgctgggacaacttcctgtctgccaacacgctccaaatg
ttacacaacatgaagggtcagtttgctgaacacctcatgcatgcaggctttgtcagcagc
agtgaccctaaagacccccaatccaatatcaactcagataatgagaagttaatcaaagcg
gtgattgtagctggactctaccctaaagtggccatgatcagaccgtctttcagcaaaaag
agacctggggtgaaggtgtacacccagrctgatggaaaggtgtgtatccacccaaaatct
gtcaacgctgaagagaaggagttcaactacacgtggctcatttaccacctcaagatgaga
acaagcagtatcttcttgtacgactgcacagaggtgtctccgttctcactgctgttcttc
ggaggggacatcaccatccagaaagaccaggaccaggagaccatcgcagtcgaccagtgg
atcgtcttcagatccccagcacgcatcgctcaccttgttaagagtttaaaaaaagagctg
gattcactgttagaagagaaaatcagtaatccagctcctgtggactggaacaatcgtcag
tccaaagactgtgccgtcatcacagccatcatagacctcatcaccacccaggagaaacct
acaggtggcagtaaaaactatgacaggacgtgggcgtctgctccaagagggaaacacatg
tatttcaacgatgaagatgatgatgacgacgattag
DBGET
integrated database retrieval system
