Austrofundulus limnaeus (annual killifish): 106519542
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Entry
106519542 CDS
T06063
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04020
Calcium signaling pathway
alim04080
Neuroactive ligand-receptor interaction
alim04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
106519542
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
106519542
04082 Neuroactive ligand signaling
106519542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
alim04040
]
106519542
Ion channels [BR:
alim04040
]
Ligand-gated channels
Glutamate (ionotropic)
106519542
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BTK
Motif
Other DBs
NCBI-GeneID:
106519542
NCBI-ProteinID:
XP_013866714
UniProt:
A0A2I4BG41
LinkDB
All DBs
Position
Unknown
AA seq
1058 aa
AA seq
DB search
YLFTQGMYSCCQFEDETAPGGSKSSLPQYHTVTTMPSVPQQHLVTATVNNTTAIAMVQQQ
QPKHHPQQQGQTYTTMLPGSPPATGHSAMALGPSNSPLLEGPMPCSTFLPRHDRRLAVVD
RWNRPKPEKVMSGGSSGGVGVGGIAGGITDLQSQQQFQQSLGMHWSLQGGVTGGVGGSGD
TGLDEYKRYYGPIDPEGLGANLDQQAGGPQQTPKTNSRGFKAPGIPRLPPKGPHQGQAHL
ISKPPPPIPCSPRRPPFWRRGSLVQTRRKGSGGPLYENILPLGRRGGGRYGASDGVGRRG
RRPPPPPLPVPLSSPTHTPTTPSSPCRFYSSCSSASSSSSSSSSSSSSSSSSGSLSRSNS
PSSCTSDSSYNSSLSFRYRAGDRDFTVDDEYDSDLLTEESSLLLGSRKKIRSRRMSSRSL
PCSPPPPPIPPRKPHPQRNYGRERTSSQLAQLQEWWASWGDRERGRGGMTNKGNAALGRD
EKRHHKERERERKRRKKGRKKKKREERERERERKRRKAKKKRKKDDRLRKRERKRSELES
GDQEKREEGKSEMPEFPPYPPSRRESFRKKSESSIRSYGWNIPGEEERKEREENKREDGE
ESRGKDRHHRRRNIKHHHSSGNKPSTSVKFWGGGNPSDNIPSAFLPLLPVSSKRRKSKSS
DRDAVCMEGERRPLLGRNERGEMHSKEGLSFHEWESEVEGREEDSESERRKADHGKRHGG
SRTLSDEDRERDKVVGIYSDDDGSSGEFGKFERYWEDHEGRAVGGIGGGGWFFSTYPSRD
KAGTINSRDDLFLERGERWGTAETEWGSSAVGGGGGGGDREWGSGSHWPPPPLTPPPPRR
YWSVDKLHIQDEKKTKRKSKDKGRGHTACSTCQSPRHHPHYAKWARVTSRSQEELYPHCQ
NFGGPLKPKHDSTSSSKPDRSHNPSKSGSQSNLSIQQRTQRTDRDRDRGRPPSPPSSLIP
NLPSPLPALPAPPSSVHSIHVPPLTSSSSVSSPSVVSSTPGAPQASSMASASAKLQYQRL
RSVPQPQRFPQSPHLPLKAKSLCSRRGSAHFSSVESEV
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
tatctctttactcagggaatgtatagttgctgtcagtttgaggatgagacggcaccagga
gggagcaaaagctccttgccccagtaccacactgtgactaccatgccctctgtcccccaa
cagcacctcgttacagctacagtcaacaacacgactgccattgccatggtgcaacagcaa
cagccgaagcaccacccacagcaacaagggcagacctacaccactatgctccctggatca
ccaccagctacaggacattcagcaatggctctgggtccctcaaacagccctttattggag
ggccccatgccttgttccacctttttgcctcgtcatgaccgcagactggcagtggttgat
cgatggaacaggccaaagccagaaaaggtcatgagcggaggtagcagtggaggagtaggt
gttggggggattgcaggagggattaccgatctacagtcgcagcagcagtttcaacagagc
cttggaatgcactggagtctacaaggaggagttacaggtggagtaggaggtagtggcgac
acagggcttgatgaatataagcgctattatggtcctatagatccagaggggttgggggct
aacttggaccaacaagcaggaggccctcagcagactcccaaaaccaattctcgaggcttt
aaagccccagggataccaaggctgcctcctaaaggtcctcatcaaggacaagcccaccta
atctctaagccgcctccaccaatcccatgctctccacgacggcctccattctggcgacga
ggaagccttgtacagacaaggagaaagggctcaggaggtcctctatatgagaatatactc
cctctaggaagacggggaggtggaagatacggagcaagtgatggtgttggaagaagagga
cgtcgcccccctcctcctcctcttccagtccccctttcttccccaacacatacccctacc
actccctcttccccatgccgtttctactcatcctgttccagtgcctcgtcctcttcctct
tcctcctcctcatcttcatcatcctcttcatcctctgggtcactttctcgatccaactcc
ccatcctcttgcaccagtgacagctcctataactcttcgctaagtttccggtatcgtgcg
ggcgatcgggatttcacggtagatgatgaatatgactcggaccttctcacagaggagtcc
agccttcttctagggtcacggaaaaagattcgctcacgacgcatgtcatcgcgttcactg
ccatgcagccccccgcctcctccaataccaccacgaaaaccacacccgcagagaaattat
ggtagagagagaaccagcagtcaactggcccagttgcaggagtggtgggcatcatggggt
gaccgagagcgaggaaggggaggcatgacaaacaaaggaaatgcagctttgggcagagat
gagaagagacatcacaaagagagggagcgtgagagaaaaaggaggaagaaaggtcggaaa
aagaagaaacgagaagagagggagcgggaacgagagcgaaagcgacgtaaagcaaagaag
aagaggaaaaaagatgacaggttaaggaagagagagcgcaagagatctgagctggaaagt
ggagatcaagagaaaagagaggaaggtaaatcagaaatgccagaattcccaccatacccg
ccttcaaggcgagagtcgtttcggaaaaagagtgagagctccatccgaagctatggatgg
aacattccaggtgaagaggaaagaaaagaaagggaggagaataaaagggaagatggcgaa
gagagcagaggaaaggatagacaccacaggcgaagaaacatcaagcatcaccatagctcc
ggtaataagccttctacatctgttaagttctggggtgggggcaatccttctgacaacatt
ccatctgcctttctgcccttgctacccgtctcttctaaaagaagaaaaagtaaaagttct
gacagagatgctgtgtgcatggaaggagagaggaggccattgttgggacggaatgaacgt
ggtgaaatgcactcgaaggaagggctatcctttcatgagtgggagtctgaagttgaggga
agagaggaagattctgagtcagagaggcggaaagcagatcatggaaaaaggcacggagga
agtaggactttgtcagatgaggatcgagaacgtgataaagtagttgggatatattccgat
gatgacggttcttcaggagaatttgggaagtttgagagatactgggaggatcatgaaggt
agggcagtgggtgggattggaggaggaggttggtttttcagcacgtatccctcaagggac
aaagcgggcaccatcaacagcagagacgatctcttcctagagagaggagaaaggtggggg
acagcagagactgagtggggttctagtgcagttggaggtggcggtggtggaggagataga
gagtgggggtcaggttcacactggcccccgccgcctctcacgccacctcctcctcgaaga
tactggtcagtggacaagcttcacatacaagatgagaagaagaccaaacgcaagtctaaa
gacaagggaaggggacacacagcttgttcgacctgtcaatccccccgacaccatccgcac
tacgctaaatgggcccgtgtaacctcacgaagccaggaagagctgtacccccactgccag
aattttggtggtcccttaaagccaaaacatgattccacatcatcatccaagcctgaccga
tcgcataatccatcgaaatctggaagccagtcaaacctcagcattcagcaacggacacag
agaacagacagggatcgggatcgaggaagaccaccatccccaccttcttctctcattcca
aacttgccatccccactccctgcccttccagctcctccctcctcagttcactctatccac
gttcctcccctcacatcttcttcttctgtatcttctccctcggtggtctcgtccacaccg
ggggcgccccaggcctcctcaatggcttcggcaagtgccaaactacagtaccagagactg
cgctccgtaccccagccccagaggtttcctcagtctcctcatttaccccttaaagccaag
agcctgtgctcacgaagaggatcagcccatttctccagtgtggagagtgaagtctga
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integrated database retrieval system
