Austrofundulus limnaeus (annual killifish): 106519580
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Entry
106519580 CDS
T06063
Symbol
rxrb
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03320
PPAR signaling pathway
alim04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
106519580 (rxrb)
03320 PPAR signaling pathway
106519580 (rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106519580 (rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
alim03310
]
106519580 (rxrb)
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
106519580 (rxrb)
Nuclear receptors [BR:
alim03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
106519580 (rxrb)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
106519580
NCBI-ProteinID:
XP_013866760
UniProt:
A0A2I4BG89
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLVPSAASMTSLPPITTAGVNSPISSIGSPFSVIS
SSLDSPCLPGTPSVGYGPISSPQINSTVTMSGLHTVSSSDDVKPPLGLKQLSAHSPGPML
SQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCIVDKRQRNRCQY
CRYQKCLAMGMKREVAKMNDRSVQEERQRNKEREGEVESTTAVNEEMPVEKILEAEMAVE
QKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGW
NELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRANNAEVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIILFNPDAKGLSNCSEVELLRERVYASLESYCKQKYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcagagattctcgcagtccagacagttcgtctgtgtcttccccaccttcg
ggccaacgctcacccccactggttccatcagcagcttccatgacctccctgccgcccatc
accaccgctggagtcaacagccccatcagtagcatcggctccccattttccgttattagc
tcatcactggactcaccctgcctacctggcaccccgtcagtgggatatggcccgattagc
agccctcagatcaactcaacagtgaccatgtccgggctccatacagtgagtagctctgat
gatgtgaaacctccactgggcttgaaacagctgtcggctcacagcccaggaccgatgctt
tcccagaaacgcctttgttccatctgcggagatagatcctctggtaagcattatggtgtc
tacagctgtgagggatgtaaaggcttcttcaagagaacagtgcgaaaggacctaacctat
acttgtcgagacaataaagactgtatagtggataagagacagaggaaccgctgccagtac
tgccgctatcagaagtgcctggccatgggcatgaagagagaagtggccaagatgaacgac
agatctgtccaagaggagcgtcagaggaacaaggagcgcgaaggcgaggtcgagtccacc
actgcagtgaacgaagagatgccagtcgagaagattttggaagctgagatggccgtagag
caaaagacggagcttcaygcagatggaagctcaggcggcagctctcccaacgatccagtc
accaacatctgtcaggcagcagacaagcagctcttcaccctggtagagtgggccaagagg
atccctcacttttctgagctgcccctggatgatcaggtcatcttgctgcgtgcaggctgg
aatgagctcctgattgcatcgttctcccatcgctccatctcggtgaaagacgggattttg
ctggccacaggtctccacgtccacagaaacagtgctcacagtgcaggggttggagccatc
tttgacagggcgaacaatgctgaggttggggccatatttgacagggttttgaccgagctc
gtaagcaaaatgagagacatgcagatggacaagaccgagctgggctgtcttcgtgctatt
attctttttaacccagatgccaarggtttgtccaactgcagtgaggtggagcttctcaga
gagagggtttatgcatcccttgaatcttactgtaaacagaaataccccgatcagcagggc
aggtttgcaaagctcctccttcgactcccagcactgcgctccatcggtctgaagtgcctg
gagcatttgttcttctttaaactgattggtgacacacctattgacacctttctgatggag
atgcttgaggcgcctcaccagctgacctaa
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