Austrofundulus limnaeus (annual killifish): 106519697
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Entry
106519697 CDS
T06063
Symbol
trmt13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alim03016
]
106519697 (trmt13)
Enzymes [BR:
alim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
106519697 (trmt13)
Transfer RNA biogenesis [BR:
alim03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106519697 (trmt13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
LED_rpt
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
106519697
NCBI-ProteinID:
XP_013866922
UniProt:
A0A2I4BGR2
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MAAPGRCGFFVQRKNRFCKMIVGKGKRFCGEHATMEEVGGTKRIPCPLDPKHTVTEDKLE
KHLKKCNSREKPRAAYFVENINAGPADVDENLPQVGLSEFSRTDLESLVDKLKTAVEGLQ
WDVEDKILSHLVLQDELSNPKNGDSAHKHLKQQASILGHLEDLGLLRRGRCFVEFGAGRG
KLSHWIHEALKTQEDLKTQEDLKTQEDLKTQEALKTQEDLKTQEALKTQEDLKTQEALKT
QEDLKTQEALKTQEDLKTQEDLKTQEALKTQEDLKTQEDLKTQEDLQLLLVERSSTRFKV
DGKHQDSRTELQRLQVDIQHLDLGKVQLLQQKKLPLVGVGKHLCGAATDLALRCLLETPK
AREEPEPAPKXLKASELRPEPGPGTSPVLGLVVALCCHHRCEWRHYVGQNFFLQRGLGPA
EFSTFCRMSSWATCGLRPANQDCPSQDPANQDCPSQDPANQDCPSQDPANQRAEDEEHEA
ADETDATSGWSSAGERQQVGRLCKLLIDEGRRDFLKTKGFSSQLIRYIDPQVTLENILLT
AVPSSSSAVS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccggcaggtgcggcttcttcgtgcagagaaagaaccgattctgtaagatg
atcgttggcaaagggaaacggttctgtggcgagcacgcgaccatggaggaagtgggcgga
accaagaggatcccctgtcctctggaccccaaacacacagtgactgaagacaaactggag
aaacatctgaagaaatgtaactccagagaaaaaccccgagctgcttattttgttgagaac
atcaacgcaggaccagctgacgtggatgagaatcttccacaggtgggtctgtctgagttc
agcagaacagacttggagtctctggtggacaaactgaagacagctgttgaaggactgcag
tgggacgtggaggacaagattctgtctcatcttgtcctccaggatgaactgtccaaccca
aagaatggagactccgcccacaaacacctgaagcagcaggcctccatcttaggtcacctg
gaggatctggggctgctcaggcgggggcgctgctttgtggagtttggagcaggtcgaggg
aaactgtctcactggatccacgaggccctgaagacccaggaggacctgaagacccaggag
gacctgaagacccaggaggacctgaagacccaggaggccctgaagacccaggaggacctg
aagacccaggaggccctgaagacccaggaggacctgaagacccaggaggccctgaagacc
caggaggacctgaagacccaggaggccctgaagacccaggaggacctgaagacccaggag
gacctgaagacccaggaggccctgaagacccaggaggacctgaagacccaggaggacctg
aagacccaggaggatctacagctgctgttagtggagcgctccagtacccgcttcaaggtg
gacgggaagcatcaggactccagaactgagctccagaggcttcaggtggacattcagcac
ctggacctggggaaggtccagctgctgcagcagaagaagcttcctttggtcggagtcggc
aaacatctgtgtggagcagcaacagacttggccctgcgctgcttactggaaacacccaaa
gccagagaggaaccagaaccagctccaaaacrcctcaaagcatcagaactgaggccagaa
cctggtccaggtaccagtccagtgctgggcctggtggtggctctgtgctgccaccatcgc
tgtgagtggcgccactacgtgggccagaacttcttcctgcagagaggacttggacctgca
gagttctccaccttctgtcgcatgtccagctgggccacatgtggactcagaccggccaat
caggactgtccgtcacaggatccagccaatcaggactgtccgtcacaggatccagccaat
caggactgtccgtcacaggatccagccaatcagagagcagaggatgaagaacatgaagca
gcagatgagacagacgccaccagtgggtggtcctcagcaggtgagcggcagcaggtggga
cgtctctgtaagctgttgattgacgagggcagacgtgacttcctgaagaccaaaggcttc
agcagccagctgatccgttacatcgaccctcaggtgaccctggagaacattttactgaca
gctgtaccctcctcttcctctgctgtgtcctga
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