Austrofundulus limnaeus (annual killifish): 106519709
Help
Entry
106519709 CDS
T06063
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
alim03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106519709 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106519709 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106519709 (ranbp2)
03110 Chaperones and folding catalysts [BR:
alim03110
]
106519709 (ranbp2)
04121 Ubiquitin system [BR:
alim04121
]
106519709 (ranbp2)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106519709 (ranbp2)
Chaperones and folding catalysts [BR:
alim03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
106519709 (ranbp2)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
106519709 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_16
TPR_2
TPR_1
TPR_8
ARM_TT21_C
TPR_CcmH_CycH
DUF1681
Motif
Other DBs
NCBI-GeneID:
106519709
NCBI-ProteinID:
XP_013866936
UniProt:
A0A2I4BGR4
LinkDB
All DBs
Position
Unknown
AA seq
3036 aa
AA seq
DB search
MRRSKAEVDRYVSSVQNSSPSLKEKPVKGFLFAKLYFEAKEYELAKRHVSEYLKVQERDP
KAHKFLGQLYEREGDINKAAGCYKRSVDLNPVQKDLVLKVAELLVDKKECDSRAEFWVEK
ASKLMPGHPAVFNLKERLLSRQGQQGWNQLFDLLQAELTARPADAHVNVKLVQLFCQDGR
LDEAVKHCLAAEKRGLLRNSQDWYTVVLHTLQEYLAQPNVSANEKMCRRLQREVLLTHCS
LLRITLSDSGVQSSLDAFRGFDQAMQTLCSIANRHTDDLFEVFMEMRGHLYLHAGTLLLK
LAHDRQQTWRAISDQATLCYLLAYQVPRPKSKVTKRXLSAPQFLELLANDRQSQAGHMLF
NLSSDSSALIREVVEAFGNRCGQESMFELLWGPQASPGSSYIANDDIRFLCAAXPELSKL
ARWDTGSILLHNGELQHLSWLGLQWTLLGQRPPMRDWLQQIFPRLTLETSKLDTNTPESI
CLLDLEVFLYGVVFCSHCQLQDTAKISNGMSPQQQLFEPRCLPLPLLRLLTTDRQREWWD
AIYSLIHKRAVPGTSAKLRMIVQHGLSTLRAGEKHGLQPALAIHWARTLSQTGDGMNSYY
DQKEYIGRSVHYWKVVLPMLEKIKNRRSIPEPLDPLFLHFHSKDIQISDVKGLEEEAKIA
YAVLLDIEGRTEEAIATLESISNLSSSWHLAQIYQRLAEEASNGVEETQDRCVTFLRKFR
SYLSKIYNANADDIDKLPVSMEEVVDLLNDVNQQLGETGEDMDEEDEKEMEHQRAFAHSS
PAYPTETSAAISHMKFSSPSPNKSIVSPSKRLISPKTPPHWVEDQKSLLQMLCQQVEALK
NEVHDLKHNSSASADSPHHKLYGEGYRAESMQDSFTPVQSYHGAPLTVATTGSSLYYNQS
PAYNSQYLLHTAANVTPTKGPMYGVNRMPPQQHMYSYQPPTHTPPLQTAPACIYPPQEQA
FGAPLRFESPATSLLSPYSEEYYSQSVAQQTTNPSLPEPGYFTKPSVVPIQPPKSVEGKS
MEFGKLSFSQQPPNEVPRVPSFGAGPSAQSTPSTAFKFNSNFKSNDGDFTFSASQAKHSE
SLLGLLTSDIPSKTDVVLEKPPAQEQASNQNSIFTFGNKSTTSFSFADSTQNTASLFGNI
ELPFKFGDVTKPVFGLGKTTEQEKTAVSDNDSTHGDEDEDGPHFEPIVPLPDKVDVKTGE
EEEEEMFCNRAKLYRFDAETKEWKERGIGNVKILTHNTKGKVRLLMRREQVLKICANHYI
TADMLLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTADEAALFKSKFEEAQRVVLKS
DEKQIQKEKKEESPKESASLASQFALKEGEWECPMCFVRNKPIDALCVACQHANPQSSAK
PEIKAAGETKASSFTFKFGTGSSKPSSSGSPFSGFGAFGSSIPSSFTFGTSSTKPADTTS
SAFTFGFGSQFSKKPEQWDCNKCSAKNEASADSCVSCKAPKTAIKTSVIAQTTPAAXPPA
AQPSVSVADSGFAAQFSKKPGQWDCDVCEVRNEAFADKCVACQSRNPAAKSTDEVPVPSN
VSAVSGFGPEFXKKDDQWDCNACLVRNKASATECVSCHAQNENPSLAAMFAMKEGEWDCD
SCLVRNKGSADKCVACQVPNPNAKSTSSSASSASAFNFSFVTKSSSDQPSVTALTVPFGS
SSTFQFGQNKDKDKNSDSSFKFEAPQTVPTTTSSAGFSFSMPIPAGGFKFGIQDTAKALA
KDSASSDDQTPSGSASSLLKTIADKHKEKENVSASSLNQQETDENPLIAGKANTCSFADL
AKSSGGSFQFGHQDPNFKGFSRAGEQVFLSLQSTPTKAETSNDQEDDGMYKTEDHDDIQF
EPVVQMPDKVDLVTGEEDEQVLYSQRVKLFRFDTTTSQWKERGVGTLKFLKNNANGRLRV
LMRRDQVLKVCANHWITTTMNLKPLAGSDKAWIWMANDFSDGDAKLEQLAAKFKTTELAE
EFKQKFEECQRLLLDIPLQTPHKLVDTGRTAHLIKKAEEMKSGLKDLKSFLTDEKTKIKD
EDAQEDVTASGEVPSLVVRAHGDTPGPTLEWDNYDLREGAIDDTADSSVYASPISSSPLR
KNLFRFGESTGGFSFSFQPGISPSKSPAKLNLSRVSVGTDEEQDTTQDEERDGQYFEPVV
PLPDLVEISTGEENEQVVFSYRAKLYRYDKDVKQWKERGIGDLKLLQNFDTKRVRLIMRR
DQVLKICANHWITAVMKLEPMKGAEKAWVWSAMDFAEEGEGKMEQLAVRFKLQETAKTFK
QVFEDAKVAQEKEELMTPVTIRTAAPQVSRTAASENTPAATICGEAAVAVLEETTRERTE
LPSDTEPSAAGSQSPINPSKTVVSPPKFVFGTDSLQKIFGTQTSASSLKTTDAESSAKPT
SAVPAFKMNTAAPQAAGGSSRSHEDSDVEIVYVKEPTAEQAALARKLQLPLTFFCYKNEP
GYVSDDETDDEDYESAVRALNGKLYPDPPEAAACAEEPDCQVVWEKKPTPEEEEKAKSLQ
LPPTFFCGLSTTDSDPDSDKPEDFETEVRKAHQDLVTQLKGAEPASSSLAAPTQDLTSAP
SSSSAEASGSGSTSDEQTSDKPADTRSGTPSISFPIDLSTKKSPEPKSKTGTDAAAAAAP
ASTTTTQDFGFSSLGGFSFADLAKNTEGFAFGSQDDNFSWANAGAMVFGASAPAEAKNDA
DEEGSDEEEAPKNVDIHFEPIVSLPEVETKSGEEDEEILFKKRARLYRWDRDLSQWKERG
TGDIKILFHPTKHFYRILMRRDQVMKVCANHTISQSMEIKPMNASDTALVWTATDYSDGD
GVVEQLAAKFKTPEIAESFKKTFCECQSHMGQTGEDGSGAVCQMSGVQEHSKETNPQVFL
TVAADGQPLGTITIELFSNVVPKTAENFRALCTGEKGFGLRDSIFHRVIPDFMCQGGDIT
NSDGTGGKSIYGSKFEDENFDVRHTGPGILSMANRGRDTNNSQFFITLKKAEHLDFKHVA
FGWVRGGMDVLQQMGQLGTKGGPPTKRLVITDCGQL
NT seq
9111 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggagtaaggcggaagtggaccgctacgtttcatctgtacagaattcttctcct
tcactcaaagagaagccagtcaaagggtttctatttgccaagttgtacttcgaagcaaaa
gaatatgaacttgcaaaaaggcatgtatcagagtatctcaaagtgcaggaaagggatccc
aaagcacacaaattccttgggcagctctatgagagagaaggagacatcaacaaagctgct
ggatgttacaagcgctcggtggacttgaacccggtgcagaaggacctggtgctgaaggta
gccgagttacttgttgataagaaagaatgtgacagcagagcagagttttgggtggagaaa
gcttcgaagctcatgcctggacatccagcagtcttcaacctgaaggagcgtcttttgagt
cgtcagggccagcagggctggaaccagttgtttgacctccttcaggctgagctgacggca
cggccagctgatgcgcatgtgaacgtgaagttggttcagctgttctgtcaggacggtcgg
ctcgatgaggctgttaaacattgcctggctgctgagaaaagaggcctgctgcgcaacagt
caggactggtacacygtggtgttgcacacgctgcaggaatatctggctcaacccaacgtt
tctgctaatgagaaaatgtgtcgacgtctccagagagaagtgttgttgacacactgcagc
ctactgagaatcactctgtctgacagcggcgtgcagtcaagcctagatgcattcagaggt
ttcgaccaagcgatgcagacgctgtgcagcatcgccaaccgccacactgatgatctcttc
gaagttttcatggagatgagaggccacctctatctgcatgctggcacgctgttgttgaaa
ctggctcaygatcggcagcagacctggagggccatcagtgaccaggccacgctgtgctac
ctgctggcataccaggtccccagaccaaagtcaaaagtgacaaaaagagamctgtcagcc
ccacagtttctggagcttctggcaaacgatcgacagagtcaggctggacacatgttgttc
aatctgagctctgattcgtcggctttgatcagagaggtggtggaggcatttggcaatcgt
tgtggtcaggagtctatgtttgaactcctctggggtccacaggcctcccctggatcctcc
tatatagccaacgatgatattcgtttcctttgtgctgcarctccagagctctccaaactg
gccagatgggacactggctccatcctgttgcacaatggtgaactccaacatctgagctgg
ttgggactgcagtggactcttctgggccaaaggccgcctatgagggactggttgcagcag
atttttccaagacttaccctggagacgtcaaagctagacaccaacacaccagagtcgatc
tgcctgctggatctagaggtgtttttatatggcgtggtgttctgcagtcactgtcagctc
caggacacggcgaaaatcagcaacgggatgagtccgcagcagcagctctttgagcctcgc
tgcctccctcttcctctcctccgcctcctgaccaccgacagacagagggagtggtgggac
gccatctacagcctcatccacaaacgagccgttcctggtacgtcagctaagctgcgaatg
atcgtgcagcatggactgagcactctgagagctggagagaaacacggcctacaaccagca
ctggccatccactgggctcggactctcagccaaacgggagatggaatgaactcgtactat
gaccagaaggagtacatcggccgcagtgttcactactggaaagttgttttgcccatgctg
gaaaaaattaaaaacagaagragtataccggagccccttgacccactcttcttacacttt
cactccaaggatattcagatttcagatgtaaaaggtttggaagaagaagctaaaatagca
tatgcagtactcctggacatcgaaggcagaaccgaggaggcaattgccactttggaaagc
atcagtaacctgtcgtcctcctggcatttagcacagatttatcagcggctggcagaagag
gccagcaatggggtggaagaaacccaagacaggtgtgtaactttcctgaggaagttcaga
agttatctgtcgaagatctacaacgccaatgcagatgatatcgataagcttcctgtgtcc
atggaggaggtggtggacctcctgaatgatgtcaaccaacagctgggtgagactggggag
gacatggatgaggaggacgaaaaggagatggagcatcaaagagcttttgcccactccagc
cctgcttatcccacagaaaccagtgcagccatttcccacatgaagttttcttctccctct
ccaaacaaaagcattgtttctccttccaaaagactgatttcaccaaagacaccacctcat
tgggttgaggatcagaaaagtctccttcagatgctttgtcagcaggttgaagcactcaag
aatgaagtccacgatctgaaacacaactcttcagcgagtgcagactctcctcatcataag
ttatatggggaaggctacagggcagaaagtatgcaggattcttttacccctgtgcagtcc
tatcacggagcccccctaacagttgccaccacaggttcctctctgtattacaaccagtct
ccagcttataactctcaatatcttttgcacacagcagcaaatgtaacgccaaccaagggt
ccaatgtatggtgtgaaccgtatgccacctcagcagcacatgtattcctaccagccgccc
actcatactcctccattgcagacagccccagcttgcatctaccctccgcaggagcaggcg
tttggtgcccctcttcgatttgaatcaccagccacaagtctcctttctccttacagcgaa
gaatattacagccaaagtgttgcccaacaaaccactaacccttctctgcctgaacccggg
tacttcaccaagccgtctgtagtccctattcaaccaccaaagagtgttgagggcaagtct
atggagtttggaaagctttctttcagccagcagcctcctaatgaagttcccagggtaccg
agttttggtgcaggaccatctgcccagtctacaccttcaaccgctttcaaattcaattcc
aattttaaatccaacgatggagattttaccttctcagcttctcaagccaagcacagtgaa
agtttgctagggcttctcacatcagacattccctccaaaactgatgtcgttctggaaaag
cctccggcccaggaacaggcctccaaccaaaatagcatcttcacctttggcaataaaagt
accaccagcttctcatttgctgattccacacagaacaccgcaagtctttttggaaacatt
gagctgccttttaaattcggagatgttaccaagccggtatttggccttggcaagacaaca
gaacaggaaaaaacagctgtgagtgacaatgatagcacacatggtgacgaagatgaagat
ggtcctcactttgaacctattgtacctcttcctgacaaggtagatgtaaaaacaggcgag
gaagaagaggaggaaatgttttgcaacagggcaaagttgtatcgatttgacgcagagaca
aaagagtggaaagaaagaggcattggcaatgttaaaatccttacgcacaacactaaaggg
aaggtccgcctcttgatgagaagggaacaagtccttaagatctgtgcaaaccactacatc
actgctgacatgctgctgaaaccaaatgctggctctgacaaatcctgggtgtggaatgcc
attgattacgcagatgaggagcctaaacctgaacaactggccattcgctttaaaacagcg
gatgaggcagctcttttcaagtctaagtttgaggaagctcaaagagttgtgctcaaatca
gatgaaaagcaaattcaaaaagagaagaaggaggaaagtccaaaagaatccgcatcacta
gcttcccagtttgcactcaaggaaggagaatgggagtgccccatgtgctttgtgagaaat
aaacccattgatgcgctgtgtgtggcatgtcaacatgccaatccacagtcttcagcgaaa
ccagaaataaaagctgctggggaaaccaaagcaagttcattcactttcaaatttggtaca
ggttcatcaaagccatccagttctggctctccattttctggatttggtgcttttgggtcc
tctataccgtcctcatttacatttggcaccagctccacaaaacctgcagacacaacatcc
agtgcgtttacgtttggctttggatcacagttcagtaaaaagccggagcagtgggactgt
aacaagtgttcggcaaaaaatgaagcgtccgcagacagttgtgtttcatgtaaggctcct
aaaactgcaattaaaacatctgtgattgcacaaactacacctgctgcagakccacccgca
gcgcagccttctgtgtctgttgctgactctggttttgccgcacagtttagtaagaaacct
gggcagtgggactgtgatgtatgtgaagtgagaaatgaggcatttgctgacaaatgcgtt
gcctgtcagagtcgaaatcctgcagctaaatctaccgacgaggttcctgtaccttcaaac
gtgtcagcagtgtcaggatttgggcctgagtttscaaagaaagatgatcagtgggattgc
aatgcctgcctggtcagaaataaagcgtcagctaccgaatgcgtttcctgccatgctcaa
aacgaaaatccctctcttgcagccatgtttgccatgaaggaaggagaatgggattgtgac
agttgtcttgtaagaaacaaaggctctgctgataaatgtgtggcctgtcaggttccaaat
cctaatgctaaaagcacaagcagctctgcttcctcagcctctgccttcaacttctccttc
gtaaccaagagctcgtcagaccaaccttctgtaactgcgttgacggtgccttttggaagt
agcagcacttttcagtttggtcaaaacaaagacaaagacaaaaactckgattcttctttc
aagtttgaagctccccagactgtacctacaaccacaagttctgccggcttctctttctca
atgcccattccagctggtggctttaagtttggcattcaggacacagcaaaagctttggca
aaagattcagcttcatccgatgatcaaacaccatcagggtcagcttctagtctccttaaa
accattgctgacaaacataaggagaaagaaaatgtgtctgcatcttcgctgaaccaacaa
gaaaccgatgagaatccattaattgccgggaaagctaatacatgcagttttgcagacttg
gctaaatcctctggagggagcttccagtttggccatcaagatcctaatttcaaaggtttc
tccagggctggggagcaggtgttcttgtcactccagtcaactcccaccaaggcagaaacc
tcaaacgatcaggaagatgatgggatgtataaaaccgaggatcatgatgatatccagttt
gaaccagtggtccagatgcctgataaggtggaccttgtaacgggtgaggaagacgaacag
gttctgtactctcagcgcgtcaaactgtttagatttgataccaccaccagtcagtggaaa
gaacgaggggtgggaactctcaaattcttaaaaaataacgcaaatggtcgccttagggta
ctgatgaggcgagatcaagttctgaaggtctgtgccaaccactggatcaccaccaccatg
aaccttaagcccctggcaggctcagacaaagcatggatctggatggccaatgacttctct
gatggagatgccaagcttgaacagctggccgccaaatttaaaaccacggagcttgccgaa
gagttcaagcagaagtttgaagagtgccagaggctcctgttagacatccccctgcaaacc
ccccacaagctggtagacaccggcagaacagcacacctcattaagaaagcagaggaaatg
aagtccggcttgaaagacctgaaatcatttttgacagatgagaaaacaaagatcaaagat
gaagacgcacaggaagatgtcacagcctccggtgaagttccaagtctcgtcgtcagagct
cacggtgacactcctggtcctaccttggagtgggacaactatgacctaagagaaggagct
atagatgatactgctgactcatctgtttatgcttcccctatttccagcagtcctctgaga
aaaaaccttttccgcttcggggaatccactggtggtttcagcttcagttttcagcctggc
atcagcccttccaagtctcctgcaaagctcaacctgagcagagtctcggtcggtacggat
gaggagcaggatactactcaggatgaagaacgggatggtcagtactttgaacctgtggtc
cctttgcccgatttggttgagatctcaactggggaggagaacgagcaggtggtcttcagc
tacagagccaaactgtatcgctacgacaaagatgtgaaacagtggaaggagaggggcatc
ggagacctgaagctcttacagaattttgacactaaacgagtgaggctaatcatgaggcga
gaccaggtactgaagatctgtgccaaccactggatcacagcagtgatgaagctggaaccc
atgaagggggcagagaaggcttgggtctggagcgccatggactttgcagaggaaggagag
ggtaaaatggagcagctggctgtgaggttcaagctgcaagaaaccgccaaaacgtttaaa
caggtctttgaagacgccaaggtggcgcaagagaaagaggaacttatgactcctgtgacg
atacgaactgctgcgccgcaagtcagcagaacggcagcatccgaaaacaccccagctgca
actatatgtggagaagcagccgtcgccgttctagaagagacgacgagagaacgaacagag
ctgccttctgacacggagccaagtgcagcaggatctcagagcccaattaatccttcaaag
accgtggtgtctccccccaagtttgtctttggcaccgatagcctccagaagatctttggg
actcaaacatctgcatcaagtttaaaaaccacagatgctgaaagttcagctaagcccaca
tctgctgttcctgcattcaagatgaacacagccgctcctcaggcagcaggaggcagctcg
aggtcacatgaggactctgatgtagagattgtttacgtcaaagagcccactgctgaacag
gcagctttagccagaaagctgcagctgcctcttaccttcttctgctacaagaacgagccg
ggctacgtcagcgatgatgaaacagacgatgaagactatgagtcagcagtgagagccttg
aatggaaaactgtaccccgatcctcctgaggctgcagcttgtgctgaagagccagactgt
caggttgtgtgggagaagaaaccaacaccagaggaggaggagaaggcaaaaagtctccag
cttccacccacgttcttctgtggcctgagcaccacggacagcgacccggacagcgacaag
cctgaagactttgagaccgaagtccgtaaagcacaccaagacctggtcacccagttaaaa
ggagccgagccggcctctagcagtctcgcagcccccacacaagacctgacctcggcccca
tcgtccagcagtgcagaggcttcaggcagcgggtcgacatcagatgaacaaacttcagac
aagccagcagacactcggagtggaactcccagcattagtttcccaattgacctgtcgacc
aagaagagtccagaaccgaagtctaaaactgggacagatgctgctgctgctgctgctcca
gcttccacgacgacaacacaagattttggtttcagttctcttggaggattttcttttgct
gacttggcgaaaaacacagaaggttttgcatttggatctcaagatgataatttctcatgg
gcaaatgctggtgcgatggtttttggggcttctgcacccgctgaggctaaaaacgatgct
gacgaggagggaagtgatgaagaggaagctcctaaaaatgtggacattcactttgagcct
attgtgtctttaccagaggtggagaccaagtctggagaggaggatgaagaaatcctgttt
aagaagcgagccaggctgtaccgatgggaccgcgacctcagccaatggaaggagcgcggc
acaggcgacatcaagatcctcttccatccgaccaaacatttttatcgaatcctgatgaga
agagaccaggtcatgaaggtttgtgccaaccacaccatctcgcagtccatggagattaaa
cccatgaacgcctctgataccgcgctggtctggaccgccacagactactcagatggtgat
ggagtcgtggagcagctggcagccaagttcaaaactccagagatcgccgaatccttcaag
aaaaccttctgcgaatgtcaaagccacatgggccaaaccggagaggacggttcaggtgcc
gtgtgtcagatgtccggagtccaggaacactctaaagagacgaaccctcaggtgttcctc
acagtcgctgctgatggccagcctctgggcaccatcaccatagagcttttctccaacgtt
gttcccaagactgcagagaacttcagggctctctgcaccggagagaaaggcttcgggctg
cgggactccatcttccacagggtcataccagatttcatgtgtcagggtggtgacatcacc
aacagcgacggcaccggtggcaaatccatctacggcagcaagtttgaagatgaaaacttt
gatgttcggcacacgggcccgggcatcctgtctatggctaaccgtggacgcgacaccaac
aactcgcagttcttcataaccctgaagaaagccgaacatttggacttcaaacacgtggcg
ttcggctgggttcgaggcggtatggatgtgttgcagcagatgggacagctgggcacaaag
ggaggccctccaacaaagaggctggtcatcacggactgtggtcagctgtag
DBGET
integrated database retrieval system
