Austrofundulus limnaeus (annual killifish): 106519849
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Entry
106519849 CDS
T06063
Name
(RefSeq) transcription factor Sox-1a-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106519849
Transcription factors [BR:
alim03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106519849
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
106519849
NCBI-ProteinID:
XP_013867138
UniProt:
A0A2I4BHE3
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MYSMMMETDLHSPGPQTNTSTGPNGGSNKANQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LAGGLLSGPSAGGGVGLTVGMSSSGVGQRLESPGGHGGSASSGYAHMNGWANGAYSGQVA
AAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQSY
MNASPSSYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSHSDHHNYHQWMWITEEGL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaactgacctccactcccccggcccccaaacgaacacgagc
acggggccgaacggcggttccaataaagcgaaccaggagcgcgtaaagagaccaatgaac
gcgttyatggtgtggtcccgcgggcagcgcaggaagatggcgcaggagaatcccaagatg
cacaactcggagatcagcaagcggctgggtgccgagtggaaagtgatgtccgaggcggag
aagcgccccttcatcgacgaggcraagcggttgcgcgccatgcacatgaaggagcatccg
gattacaagtaccggcccaggcggaagaccaagacgctgctgaagaaggacaaatactcc
ctggctggtgggttgctgtctggacccagcgccggtgggggagttggtttgactgtcggc
atgagctcatccggggtcggacagaggttagagagccccgggggtcacggaggctccgcc
agctccggctatgcgcacatgaacggctgggcgaacggcgcgtactcggggcaggtggct
gcagccgctgcggctgcggcgatgatgcaggaggctcagctcgcctacagccagcacccc
ggcagcggagcgcatcaccaccaccactcccaccaccatcactcccacaacccgcagccc
atgcaccgctacgacatgacggctctgcagtacagccccatctcgaactctcagagctac
atgaacgcctccccgtccagctacggcgggatcacctacacgcagcaccagggctccggc
gtctcctcctcggccgccatggggacgttaggttcgttggtgaagtcggagccgagccat
agtgaccatcacaactatcaccagtggatgtggatcaccgaggagggactgtga
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