Austrofundulus limnaeus (annual killifish): 106519926
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Entry
106519926 CDS
T06063
Symbol
polb
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106519926 (polb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alim03400
]
106519926 (polb)
Enzymes [BR:
alim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106519926 (polb)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
106519926 (polb)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
106519926 (polb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
HHH_8
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_5
NTP_transf_2
HHH_2
DUF4806
Cdd1
Motif
Other DBs
NCBI-GeneID:
106519926
NCBI-ProteinID:
XP_013867246
UniProt:
A0A2I4BHN3
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MSKRKAPQESLNEGITDFLVELANYEKNVNRAIHKYNAYRKAASTISKYPQKIKSGEEAK
KLDGVGAKIAEKIDEFLQTGKLRKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLDDLKKIEHKLNHHQKIGLKYFEEFEKRIPRAEMEKMEALILEELEKIDTEYIGTICGS
YRRGAASSGDIDILLTHPEYTSQTEKQPKLLHAVVEHLESIGFVTDTLSKGDTKFMGVCQ
LQQSDEDEEEEEHLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYT
IRPLGVTGVAGEPLLVDSEKDIFDYIQYKYREPKDRSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagaaaagctccacaagaatccctaaatgagggaataacggactttcttgtc
gagctggcaaactatgaaaaaaatgtcaacagagcaatacacaagtacaatgcatacagg
aaagcagcgtctactatttccaagtacccccaaaagattaagagtggagaagaggccaag
aaactggatggagttggagctaagatagcagaaaaaatcgaygagttccttcaaactggc
aaactaagaaaacttgagaagattcgaaatgacgatactagctcttcaatcaactttctt
acaagagttactggaattggccctgccgctgccaggaaattctttgatgaaggagtaaaa
actctggatgatttgaaaaagattgagcacaagttaaaccaccatcaaaagattggactc
aaatactttgaggaatttgagaaaagaatcccaagagctgaaatggaaaagatggaggct
cttattcttgaggagctggaaaaaattgatacagaatatattggaacaatttgtggaagc
tacaggagaggtgcagcatcgagtggtgatattgatattttgctgacacacccagagtac
acctctcaaacagaaaagcagcccaaactccttcatgctgtggttgagcatttggaatcc
attgggttcgtgaccgacactctgtccaaaggagacaccaagttcatgggagtctgccag
ctgcagcaaagtgatgaggatgaagaggaggaagaacatcttcacaggcgtatagatata
aggttaattcccaaggaccagtactactgtggagtcctgtattttactggaagtgacatc
tttaataaaaacatgaggactcatgctctggagaagggcttcactcttaatgagtacacc
atcagaccactcggtgtcactggagtggcaggggagcctctgctggtggatagtgagaaa
gacatcttcgactacatccagtacaaatacagagagcccaaggatcgcagcgagtaa
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