KEGG   Austrofundulus limnaeus (annual killifish): 106519953
Entry
106519953         CDS       T06063                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B
  KO
K18757  la-related protein 1
Organism
alim  Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:alim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alim03019]
    106519953 (larp1b)
Messenger RNA biogenesis [BR:alim03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106519953 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 106519953
NCBI-ProteinID: XP_013867280
UniProt: A0A2I4BHR0
LinkDB
Position
Unknown
AA seq 1040 aa
MSAEVECSPVDPGLTAGSFSGAQGENHRSEPEEDQKQRGPETRPSEHDHKPKERKENDKE
NEEEGGGGGSSADSAVQVVKKKVVEAPPPKVNPWTKRTANKIPPNKIISSSQETDQQNAL
KVVRASKPRLRKSSKSGDFSDITNWPTPGELAKEQQQNLSNNGKRPSSRRDRNKRRERPD
RKSESSHDGGESKENQEAQPDPLGALSKDDESKVAQEAKSSGLKKRGGEGNKKKWVSLPL
EEASRDDAHKMSRSDADAVSSSPDATSPNQTLHNNRPHDTNWRWRGEPRDNVDDASAVRS
DGGIRGRGKGRGRGRSRGRGRFEYFRDSQSSDGSARAPPPFGTNMVYYYDDGSKVQMYTV
DEKLLKEYIKRQIEYYFSIHNLERDFFLRRKMDVQGFLPVSLIANFHRVQALTTDTNLIM
EALKSSTEVELQDEKIRCKVEPERWPIPAPPVVGSPRTDFSQLINCPEFVPRQNLAPSNT
ASLSVTEPSLESAQPEDLVNVSPPSQESPPAPPEPKDPPAPKPDPDAWIQVEKRHRQGSG
KPKGENKSPRPTHQAPPQAEPDQEELDFMFDEEMEQLAPRKNKFTDWSDEDDSDYELDDQ
DVNKILIVTQTPPYIRKHPGGDRTGSHESRAKLTTELAKAINDGLYYYEQDLWKGEEQVE
FISKDVENFKKLNVISKDEFDILTPKAPVDPNQEVPPPPMPVDSGVDLARSLPTTVPESP
STCQPRTPRTPRTPGRQDPNKTPRFYPVMKESASIDGQMPRKKKTRHSSNPPLEAHIGWV
MDSREHRSRSASISSSNASPSEGAPPTGGFGCTPQSLPKFWHPSHELLRDNGFTQQGYHK
YRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDNFNRRMYEEFKQFALEDAKDNYRYGLE
CLFRYYSYGLEKRFRLDLFKDFQEETLRDFEKGQLYGLEKFWAFLKYSKIKNQPIDPKLQ
EHLSKFKNLEDFRVVPPTGEDGGRRRRHSSSGGDEARRRRQSANVTSKQASKPASEKAPA
ARGKKPDPRGGKEDGGDQVK
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgtccgccgaggttgagtgcagtccggtcgacccgggtttgacagccggtagcttcagc
ggggcgcagggggagaaccaccgcagcgagccggaggaggaccagaagcagcggggtccg
gagacccggccgtccgaacacgaccacaaacccaaggagcgaaaagaaaacgacaaggag
aacgaagaagaaggaggaggaggaggcagcagtgctgactcggctgttcaggtggtgaag
aagaaagttgttgaagctcctccacctaaagtcaacccctggacgaagaggaccgcaaac
aaaatacctccaaataaaatcatctccagctcccaggagacagatcaacaaaatgctctg
aaagtcgttcgagccagcaagccgagattgagaaaatccagcaagtcaggagacttcagc
gacatcacaaactggcccactcctggagaactggccaaagagcagcagcagaacctcagc
aacaacgggaagaggccgtcctcgcgccgagaccggaacaagaggagagagcgacccgac
aggaagtctgagagcagccacgatggcggcgagagcaaagagaaccaggaggctcagccg
gacccgctgggagcgctgtccaaagacgacgagtccaaagtggctcaggaggccaagagc
tcgggtctgaagaagagaggaggtgagggtaacaaaaaaaagtgggtttctctgccgctg
gaggaagcgtcccgggacgacgcrcacaagatgtcccgctcagacgcagacgccgtcagc
agctcgcctgacgccacgtcgcccaatcaaacgctccataataacagaccgcatgacacc
aactggaggtggagaggggaaccgcgagacaacgtggacgatgccagygccgtccgaagc
gacggggggatccgtggacgaggaaagggtcgtggacgtggaagaagtcgtggacgaggt
cggttcgagtacttccgggactcacagtcttccgacgggtctgctcgggcgcccccaccg
ttcggcaccaacatggtttattattacgacgayggaagcaaggtgcagatgtacacggtg
gatgaaaagctgctcaaggagtacatcaaacggcaaattgagtactacttcagcattcac
aacctggagcgagactttttcctgaggagaaaaatggacgtacaaggcttcctgcccgtc
tccctcatcgccaacttccacagagttcaggctctaaccacggataccaacctcatcatg
gaggctctgaaaagcagcacagaagtggagctgcaggacgaaaagatccgctgcaaggtg
gagcccgagcgctggcccatccccgctccgcccgtcgtgggttcgcctcgcacrgacttc
tcccagctcatcaactgccccgagttcgttccccggcagaacctggccccctcaaacacg
gcttcactgtccgtgacggagccttctctggagtcagcgcagcctgaggatttagttaac
gtcagcccccccagccaggagtccccgccagcaccacctgaacccaaagaccccccggcc
cccaaacctgaccctgatgcctggatccaggtggagaaacgccaccgacagggatctgga
aaaccaaagggggagaacaagtcgccccgcccgacccaccaggctccgccgcaggccgag
ccggaccaggaggagctggacttcatgttcgacgaggagatggagcagctggcgcccagg
aagaacaagttcacggactggtcggacgaggacgactcggactacgagctggacgaccag
gacgtcaacaagatcctgatcgtcacgcagacccctccctacatacgyaagcaccccggc
ggggaccgcacgggaagccacgagtccagggccaagctcaccactgaactggccaaagcc
atcaacgatgggctgtactactacgagcaggacctgtggaagggagaggagcaggtggag
ttcatcagcaaggacgtggagaacttcaagaagctgaacgtcatcagcaaagatgagttt
gacatcctcacgcctaaagcaccggttgacccaaaccaggaagtcccgcctcctcccatg
ccagtggacagcggcgtggatctggctcgctctctgcccacgacggttccggagtcgccc
agcacttgtcagcctcgaacccccagaacgccacgcacacccggacgccaggaccccaac
aagacgccgcgcttttaccccgtcatgaaggagagcgccagcatcgacggacagatgccg
aggaagaagaagacccgccacagttccaacccccctctggaagctcacatcggctgggtg
atggactcccgggaacaccgatcacgttccgcatccatcagcagctccaacgcctctccg
tcagaaggagctccgcccacaggaggcttcggctgcaccccccagtccctgcccaagttc
tggcatccgtcccacgagctgctccgagacaacggcttcactcagcagggctaccacaag
taccgccgacggtgcctgaacgagaggaaacgtttggggatcggccagtctcaggagatg
aacactctgttcaggttttggtccttcttcctcagggacaacttcaaccggaggatgtac
gaggagttcaaacagttcgctctggaagacgccaaagacaactacaggtacggactggag
tgcctcttcagatactacagctacggtttggagaagaggttcaggttggatctcttcaag
gacttccaggaggagaccctgagggactttgagaaaggtcagctgtacggactggagaag
ttctgggccttcctgaaatactcaaaaatcaagaaccagcccatagacccgaagctgcag
gagcacctttccaagttcaagaatctggaggacttcagggtggtgcctccgaccggagag
gacggaggcaggaggaggcgccactcgtcctccggcggcgacgaggcgaggcggcggcga
caatctgccaacgtgacctcgaagcaagcctccaagcccgcctccgagaaagcaccggcc
gctcgcgggaagaagcccgaccccagaggagggaaggaggacggcggagaccaggtcaaa
tga

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