Austrofundulus limnaeus (annual killifish): 106520116
Help
Entry
106520116 CDS
T06063
Symbol
ciao1
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1 isoform X1
KO
K24730
cytosolic iron-sulfur protein assembly protein CIAO1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106520116 (ciao1)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106520116 (ciao1)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
106520116 (ciao1)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
106520116 (ciao1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_Vps41
NBCH_WD40
WDR90_beta-prop_4th
eIF2A
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
B-prop_COPA_B_2nd
Beta-prop_ELP1_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_NUP159_NUP214
Lactonase
RMC1_N
Motif
Other DBs
NCBI-GeneID:
106520116
NCBI-ProteinID:
XP_013867508
UniProt:
A0A2I4BIF4
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MKEALTLVHRFGAHPDSRCWFVAWSPNGTLLASCGGDKAVRIWGREGDSWVCKSVLQDGH
QRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFESLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWVWEVDEEDEYECVTVVNSHTQDVKHVAWHPNQELLASASYDNNICIYKEE
DDDWECRATLQGHTSTVWSLCFDATGQRMASCSDDRTVKIWKEFPSESGDLSWKCVCTLS
GYHGRTVYDVAWCRLTGALATACGDDGVRIFKEDVPAGSDEPVFSLVAQETKAHSQDVNC
VSWNPKEAGLLASCSDNGEIAIWRFKDD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagctctgacactggttcacagattcggcgcacacccggactctcggtgctgg
ttcgtcgcctggagcccgaacggaacgctgctggcttcatgcgggggtgacaaggccgtc
cggatatggggacgagaaggggactcctgggtgtgtaagtctgttctacaggatggacac
cagcgcactgtgaggaaggtggcctggtctccctgtgggaactacttggcctctgccagc
tttgatgcaaccacgtgcatctggaagaagaaaaatgatgacttcgagagtttgacagtg
ttggaaggacatgaaaatgaggtcaaatgcgtggcgtgggctccttcagggaatctcctg
gccacgtgcagccgagacaagagtgtctgggtttgggaagtggacgaggaagatgagtac
gagtgtgttacggttgtgaactcccacacacaagacgtgaagcacgttgcgtggcacccg
aaccaagagctcctggcttcagctagctacgacaacaacatctgcatttacaaagaggaa
gatgatgactgggagtgtcgggccaccttacagggacacacgtccacggtttggagtttg
tgttttgatgcgaccggacagaggatggcctcctgcagcgatgaccgcactgtgaagatt
tggaaggaattccccagtgagagtggtgacttgtcctggaagtgtgtttgtactctctct
gggtatcatggacgaactgtgtatgatgttgcctggtgtcgactgaccggcgctctggca
accgcctgcggtgacgacggagttcgaatttttaaagaggacgtgccggctggttcagat
gagccggtgttctcgctggtggctcaggagaccaaagcgcacagccaggatgttaactgt
gtttcctggaacccgaaggaagccggactgctggcctcgtgcagcgacaatggagaaatt
gccatttggcgtttcaaagacgactga
DBGET
integrated database retrieval system
