Austrofundulus limnaeus (annual killifish): 106520197
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Entry
106520197 CDS
T06063
Name
(RefSeq) LOW QUALITY PROTEIN: TBC1 domain family member 2A-like
KO
K20165
TBC1 domain family member 2A
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106520197
Membrane trafficking [BR:
alim04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106520197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_3
PH_8
VBS_C3G9
ApbE
Motif
Other DBs
NCBI-GeneID:
106520197
NCBI-ProteinID:
XP_013867615
UniProt:
A0A2I4BIP4
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MVLMDGSAAAGNPSGGSSGPLPAPADEETLPRVSENRDQDHQSPAEASEHQGPPTENLEL
EDSSNNDLNPDQGAPENTGPVGPEPRKADPDSRRPELTEKPPKRGPEKPDSLGSDQSNKR
DPAEPEQEPGSLQNQQEAEEPPPPSEESKTIQNLQDPATLLQQAPPPDDQQAPPLTVEVF
SEQARPRPPASPSGEPKLCGYLLKQAGPLRTWKQRWFTYEEKRNQLFYYRTPQDVTPLGR
VDLSGAVLTYPLKAEKGTFHIKTPERTFILKAVTQELMLYWLQQLQVKRWQHRETATCTE
QTNNNNNTTDDFLPVLKSPLGLVGEEAAXASTQRISLANMSIKHPLIEIQNSVHTLMNRT
SQEMSQSIFHTDMMNWTPESPTDTTAVSSSETPIEAPPTHFPLVDPAGEVSLTDTGELLS
PVESYNRRTKTRSLSTMPVRRRVTVTSSSERMSRVQQEKQMLMEEVKAQKELVWILHKAL
EASQLEKRTCAEFLAAENEQERLEVLRHRERQAADLRGRLEDAKVEAEALRRSLSERDAQ
LQELQENIRILTEKNKAKQQVIVKLSDQVTSCLTDQRRPDSSSSRVQDSQTMKQLQQLVE
NLKDDIEAYKTQNKFLNSEIYQLTKLWRNSSEQEKSLMVKCAFLEATNCQMESRYLGVLR
KLQETKSLDPEQQKAVQKMIEDALRGELKSVFKLSSNRDYDEYGFKVVPDYEVEDMKLLA
KIQALEIRSFNLLHQEGVERLSLTRWAEYLAGRSEDNLCPSPELKALLRAGVPPEYRPRV
WRWLVRTRTRTIWQRHPERYEQLCEKSRTSPHPASRQIQLDLHRTLTTNQNFSSLSSPAL
QQLRRILLAFSWQNPAVGYCQGLNRLAAIALLVLQNEEDAFWCLVAVVEAIMPQDYYTKT
LLASQADQWVLKDFLSEKLPRLAAHFDTHSIDVSLITFNWFMVVFVESLPSDILLPLWEA
FLXEGTKVIFRYVLALFKYKEDDILKINDSVEIYQYLRFFTKTISDSRKLISIAFNDMNP
FPRRQLRNRRALHLERLQRELRELEEQQQEFVTESAEHKDELDMGASEDDEEL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggttctgatggatggaagcgccgcggcaggaaatcccagcggtggctcgtctggaccc
cttcctgcccccgctgatgaggagacgctgccccgggtctcagagaaccgggaccaggac
caccagagtccagcagaagcttcagaacatcagggtccccccacagaaaatctggaactt
gaagattcttcaaacaatgatctgaatccagatcaaggagcaccagagaacaccggtcca
gttggaccagaaccaagaaaagctgatcctgattcaagacggccagaactgacagaaaaa
cctccaaaacggggtccagaaaaaccagattctcttggttctgatcagagcaacaaaaga
gatcctgcagaacctgaacaagaaccgggttcccttcagaaccagcaggaagctgaagaa
cctcctcctccctctgaggagtccaaaaccattcagaacctccaggatccagctactctc
ctccaacaggctcctcctcctgacgaccagcaggctccgcccctcaccgtggaggtgttc
agtgagcaggcgaggccccgccctcccgcgtctccwtcaggtgagcccaaactgtgcggc
tacctgctgaagcaggcggggcctctgaggacctggaagcagcgctggttcacctacgag
gagaagaggaaccagctgttttattaccgcacgccgcaggatgtgacgccactgggccgg
gtcgacctgagcggcgccgttctcacctacccgctgaaggcggagaagggcacctttcac
atcaagacacctgaacgcaccttcatcctcaaggctgtgacccaggagctgatgctctat
tggctgcagcagctgcaggtgaagcgctggcagcacagagagacggccacctgtacggaa
caaacaaacaataacaacaacaccacagacgacttcctgccggtgttgaagagtcctcta
ggactggtgggggaggaggcggccaytgcatcgacacaacgaatatctctcgccaacatg
tccatcaaacacccgctgatcgagatccaaaactcggtccacactctgatgaacagaaca
tctcaggagatgagtcagagcatctttcacacagacatgatgaactggacacctgaaagc
cccacagacaccacagcagtttcctcctcagaaactcccatcgaggccccgcccactcac
ttcccattggttgatccagcaggtgaggtgtctctgactgacaccggcgagctcctgtca
cctgtggagagttacaacaggaggacaaagactcgcagcytgtccaccatgccggttcgc
cgcagagtcacggtcacctcgtcctcagagaggatgtcccgggtgcagcaggagaaacag
atgctgatggaggaggtcaaagctcagaaggagctggtctggatcctccacaaagccctg
gaggcgtcccagctggagaaacgaacctgtgctgagtttctggcagcagagaacgagcag
gagcgcctggaggtgctgcggcaccgcgagcgccaggcggcggacctgcgaggccggctg
gaggacgccaaggtggaggcagaggcgctgaggaggagtctgtccgagagggacgcacag
ctgcaggagctccaggagaacatcaggatactgacagagaagaacaaagccaagcagcag
gtgatcgtgaagctgtctgatcaggtgacttcctgtctgactgaccagcgccgccccgac
tcgtcctccagtcgtgttcaggactctcagaccatgaagcagctgcagcagcttgtcgag
aacctgaaggacgacattgaggcctacaagacccagaacaagttcttgaactctgagatc
taccagctgaccaaactgtggaggaacagctctgagcaggagaagagcctgatggtgaag
tgcgccttcctggaggccaccaactgtcagatggagagccgttacctgggcgtccttcgg
aagctgcaggagaccaagtctctggatccagagcagcagaaggccgtgcagaagatgatc
gaggacgctctgagaggagagctgaagagcgtcttcaagctcagctcgaacagggattat
gacgagtacgggtttaaggtggtcccggactacgaggtggaggacatgaagctgctggct
aagatccaggccctggagatccggagcttcaacctgctccaccaggagggagtagagcgt
ctctcgttgacccggtgggcggagtacctagctggcaggtcggaggataatctgtgtccg
tctcctgagctcaaggctctgctgcgcgccggcgtcccaccagagtatcgcccyagggtg
tggcgctggctggtccgaaccagaaccaggacgatctggcagcgccacccagagcgctac
gagcagctgtgtgagaagagccggacgtctcctcacccggcgtcccgacagatccagctg
gacctccatcgcaccctgaccaccaatcagaacttctcatcgctgtctagccccgccctc
cagcagctccgccgcatcctgttggcgttctcctggcagaaccctgctgttggttactgc
cagggactgaacaggttggcagccatcgctctgctcgtactgcagaatgaagaagatgcc
ttctggtgcctggtggcagtggtagaagccatcatgcctcaggactactacaccaagacc
ctgctggcttctcaggcggaccagtgggtcctgaaggacttcctgtcagagaaacttcca
cgcctcgcggctcacttcgacactcacagcatcgacgtgtcgctcatcaccttcaactgg
ttcatggtggtttttgtggagagtctgcccagtgacatcctgctgccgctgtgggargcc
ttcctgtargagggcaccaaggtgatcttcaggtacgttctggctctctttaaatacaaa
gaagacgacatcctaaagatcaacgacagtgtggagatctaccagtacctgcgcttcttc
accaagaccatctctgacagcaggaagttgatcagcatcgccttcaacgacatgaacccg
tttcctcgccgccagctgaggaaccgccgcgcgctgcacctggagcgcctgcagagggag
ctgcgggagctggaggagcagcagcaggagtttgtgacggagagcgccgagcataaagac
gagctggacatgggggcgagcgaagacgacgaggagctttaa
DBGET
integrated database retrieval system
