Austrofundulus limnaeus (annual killifish): 106520201
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Entry
106520201 CDS
T06063
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim02010
ABC transporters
alim04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106520201
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106520201
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
alim02000
]
106520201
Transporters [BR:
alim02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
106520201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
106520201
NCBI-ProteinID:
XP_013867617
UniProt:
A0A2I4BIQ8
LinkDB
All DBs
Position
Unknown
AA seq
2292 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLVEIVWPLFIFFILITVRLNYPPYEQHECHFPNKA
MPSAGTLPWVQGILCNAHNPCFKNTTPGESPGVVGNFNDSIISRLFSDVKKILLYSQNDK
NLEGFKELARALETLQATRSGFKLKHFLRDNETLSSFLLRNASLSRLTVQQITEANVNLE
KVLLRGLGVHLKDMCPRKDGRQNLSDFVTFSDQRLVSQVQDIICEAQPEWLDKAEENFMS
NLDFFRPIRRDVGSDPEAVQQVVRATNNLLDSLGSLAVELAGMKSWVDLRNEIIFLTQNA
TSSPSAMYHAVSRIVCGHPEGGGLQIKSLNWYEDSNYKALFGNHNSSEDEALAYDNSSTP
FCNSVVRDMDSNPMSRMIWQALKPLLLGKILYTPHTPATQRIIHEVNRTFQELGVFRDLG
GMWEEMRPKVWDFMENSQQMDLIRTLLQNNNTARFFHAQLAATDWTVTDVTNFLSKRPSK
QLNGALTWREVFNETDQAIMSISRFMECVNLDKLEPVATEERLVNQSMLLLEDRKFWAGI
VFPDIAPNTTELPPKVNYKLRMDIDNVERTNKIKDAYWDPGPRADPFEDMRYIWGGFLYL
QDVIEQGIIRALTGTREKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVSIIL
KSVVYEKEARLKETMRIMGLDNGILWFSWFISSLVPLLISAGLLVLVLKMGNLLPYSDPG
IIFLFLGSYAVVTIMQCFLISTVFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGAK
VFASLLSPVAFGFGCEYFALFEEQGVGIQWQNLVSSPLQEDEFSLRTTIIVMYFDSFLYG
VLTWYIEAVFPGQYGIPRPWYFPFTKSYWFGDDGRSSKVPLNRKGNASAVCVEEEPAHLE
PGVFIENLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYILGKDIRTELSAIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEQVKGDIEHIL
QDTGLPHKRKSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDMLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLYLKNQLGTGYYLTLVKKDPEP
SLSSCRNSSSTVSFTKKDEEGASVSSSDAGLGSEHESEAATIENGPAASICTSPFVPPDA
TLVSALILRHVPAARLVEDLGHELTYILPYSAAKDGAFVELFKDLDVKLHDLGISSYGVS
DTTLEEIFLKVAEDNGVDTEVPSDGTLPVQRRRRTHAFGGGDHQSCLRPIPEDDNDECND
SEGDADCKETDWMNSTPGKGSYQVNGWSLKRQQFVALMWKRFLYARRSRKGFFAQIVLPA
VFVCIALVFSLIVPPFGKYPSLELQPWMYEDQVTFISDDAPGDANMQKLLNALMDPPGFG
TRCMDGHSIPEAPCTMGDEDWHTPDVPESVQQLFSSRNWTMENPSPXCFCTTNGRKRMLP
DCPEGAGGLPPPEIKLSATDTLQNLTGRNISDYLVKTYSQIIGKSLKNKVWVNEFRYGGF
SLGARSTQVLPPANEIDDAIERVRKVFELKKGAAADRFLDNLSGFINGLDTKNNVKIWFN
NKGWHSVAAFSNVMSNGILRANLPPGEEASRYGINAFNHPLNLTKEQLSQVALVTTSVDV
LVSICVIFAMSFVPASFVVFLIQERVSKAKHMQFISGVHPLLYWVANFMWDMLNYFVPAI
LVILIFICFQQKAYVSSSNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSINI
LIGINGSISTFVMELFGDHEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERF
GENRFRSPLEWDMVGKNLLAMAVEGVVFFIITIFIQYRFFIKPRPVSKLTKLGALGEEDE
DVARERHRIVQGLGQGDILELRQLTKVFKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKT
TTFKMLTGDTIVTSGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLELYAVL
RGVPEQDVCDVAEWGIRKLSLLKYADKRAGSYSGGNLRKLSTAIALIGAPPVVFLDEPTT
GMDPKARRALWNCIHSIIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKN
RFGDGYTIILRVAGPDPDLQPVMKFIESELSGSTLKEKHRNMLQYQLPSSLTSLAHIFSI
LGKNKDTLRIEDYSVTQTTLDQVFVNFAKDQSDDYVSKDASVRRKDVAINIPALSPTHET
SMRGGGQQESVM
NT seq
6879 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctccactcagctgggtctgctgctgtggaagaacttcacctacagacggaga
cagacgctccagctcctggtagaaatcgtctggcctctcttcatcttcttcatcctcatc
accgtgcgtctgaactaccctccctacgagcagcatgagtgtcattttcccaacaaggcg
atgccgtcggcaggaaccctgccctgggtccaggggatcctctgcaacgcccacaacccc
tgcttcaagaacaccacgccgggcgagtccccgggcgtcgtcggaaacttcaatgactcc
ataatttctcgcctgttttcggacgtgaagaagatcctgctgtacagtcagaatgataag
aacctggagggcttcaaggaactggcccgggccctggagacgctgcaggccactcgctca
ggcttcaagttgaagcatttcctgcgagacaatgagactctatcgagctttctgctgagg
aacgcctctctgtcccggctcaccgttcagcagatcaccgaggccaacgtcaacctggag
aaggtcctcctcagaggcttaggggtccacctgaaggacatgtgtcccaggaaggacggg
aggcagaatctgtcggactttgtgaccttctcggaccagcggctggtgtctcaggtgcag
gacatcatctgtgaggcgcagcccgagtggctggacaaggctgaggagaacttcatgagc
aacctggacttcttcagaccgatccggagggacgtgggttctgacccggaggccgtccag
caggtggtccgggccaccaacaaccttctggacagtctgggctccctggctgtggagctg
gctgggatgaagagctgggtggacctgaggaacgagatcatcttcctgacgcagaacgcc
acctcctcgcccagcgccatgtaccacgccgtgtccaggatcgtgtgcggtcaccccgag
ggcggcggcctgcagatcaagtccctgaactggtacgaggacagcaactacaaggccctg
ttcgggaaccacaacagcagcgaggacgaggccttggcctacgacaactcctccactcca
ttctgtaacagcgtggtgagggacatggactcgaacccgatgtcccggatgatctggcag
gctctgaaacctttgctgctggggaagatcctgtacaccccgcacacccccgccacacag
aggatcatccacgaggtgaaccgcaccttccaggagctcggtgtgttcagggacctgggt
ggcatgtgggaagagatgaggcccaaagtctgggacttcatggagaacagccagcagatg
gacctgatcaggacgctgctgcagaacaacaacacggccagattcttccacgctcagctt
gctgccactgattggacggtgaccgacgtgacaaactttttgtccaaacgtccgtcgaag
cagctcaatggcgccctcacctggagggaggtgtttaacgagaccgaccaggccattatg
agcatctcccgcttcatggagtgtgtaaacctggacaagttggagccagtcgccaccgag
gagcggctcgttaaccagtccatgctgctgctggaggacaggaagttctgggcggggatc
gtgttccccgacatcgctccgaacaccacagaactcccgccaaaagtcaactacaagctc
cggatggacatcgacaacgtggagcggaccaacaagatcaaagacgcgtactgggaccca
ggccctcgtgccgacccgtttgaggacatgcggtacatctggggcgggttcttgtacctg
caggacgtgatcgagcagggcatcatcagagcgctgacgggcaccagagagaaaacggga
gtctacatccagcagatgccgtacccctgctacgtggacgacatcttcctgcgggtgatg
agccgctccatgccgctcttcatgacgctggcctggatgtactcggtgtccatcatcctg
aagagtgtggtgtacgagaaggaggcccgtctgaaggagaccatgaggatcatgggtctg
gataacggcatcctgtggttcagctggttcatcagcagcctggtgcctctgctgatcagc
gccggtctgctggtgctggtgctgaagatggggaacctgctgccgtacagcgacccgggc
atcatcttcctcttcctgggctcgtacgccgtggtcaccatcatgcagtgcttcctcatc
agcacggtgttttctcgcgccaacctggccgccgcctgcggaggaatcatctacttcacc
ctctacctgccgtacgtcctctgcgtcgcctggcaggactacattggcttcggggccaaa
gtctttgctagcctgctgtctcctgtggcgttcgggttcggctgcgagtacttcgcccta
ttcgaggaacaaggagtcggcatccagtggcagaacctggtgtcgagcccccttcaggag
gacgagttcagtcttcggaccaccatcattgtcatgtacttcgactccttcctgtacggg
gtgctcacctggtacatagaagccgtgtttccaggtcagtatgggatccctcgaccctgg
tacttccccttcaccaagtcctactggtttggagatgacgggaggtccagtaaagtccct
ctgaaccggaaaggaaatgcttcagctgtgtgtgtggaggaggagccagctcacctggag
ccaggagtcttcatcgagaacctggtgaaggtctaccgtcacggtaaaaagctggcagtg
gacggactgacgctcggattctacgagggacaaatcacgtctttcctgggtcacaacgga
gccggaaaaaccaccacaatgtccatcctgaccggcctgttcccgcccacctctggcacc
gcctacatcctgggtaaagacatccgcacagagctgagcgccatcagacagagtctgggg
gtctgtccacagcacaacgtcctcttcagcatgctgaccgtagaggagcacatctggttc
tacgctcggctgaagggtctgtcggaggaacaggtcaaaggcgacatcgagcacattctg
caggacacggggctgccgcacaaacgcaagtccaggaccagcaccctgtcggggggcatg
cagaggaagctgtccgtggctctggccttcgtcgggggctcaaaggtggtgattctggat
gagcccaccgccggcgtggacccctacgcccgcagagggatctgggacatgctgctgaag
tacagacagggtcggaccatcatcctgtccacgcaccacatggacgaggcggacatcctg
ggcgaccgcatcgccatcatctcccacgggaagctgtgctgcgtgggctcgtctctgtac
ctgaagaaccagctggggacgggctactacctgaccctggtgaagaaggacccggagccg
tcgctcagctcctgcaggaactcgtccagcaccgtgtccttcaccaagaaggacgaggag
ggcgcctcggtcagcagcagcgatgcaggacttggcagcgaacatgaaagtgaggcagcc
accatcgagaacggccccgcggcgtccatctgcaccagccccttcgtcccgccggacgcg
accctggtgtctgcgctgatcctgcgccacgtcccggccgcccgcctggtygaggacctg
ggccacgagctgacctacatcctgccgtacagcgccgccaaagacggcgccttcgtggag
ctcttcaaagacctggacgtgaagctgcacgacctcggcatctccagctacggagtgtcc
gacaccacwctggaggagattttcctaaaagtggcrgaagataacggcgtcgacactgag
gtaccctcagatgggacacttcctgttcagaggcggaggaggactcacgccttcggggga
ggggaccatcagagctgcctacgacccatacctgaggacgacaacgacgagtgcaacgac
tcggaaggagacgctgactgcaaagagacggactggatgaactccacccccgggaaaggg
tcctaccaggtgaatgggtggagcctaaagaggcagcagtttgtggcgctgatgtggaaa
cgcttcctgtacgctcgacgctccaggaaaggcttcttcgctcagatcgttctcccggcc
gtgttcgtctgcatcgctctcgtcttcagcctcatcgtgccgccgtttggaaagtatccc
agcctggagctgcagccgtggatgtacgaggaccaggtcacctttatcagcgatgacgca
cctggagacgccaacatgcagaagttactgaacgctctgatggaccctcctggcttcggg
actcgctgcatggacggacattctattccagaggccccctgtacgatgggagacgaggac
tggcacacacccgatgtcccagaaagcgtccagcagctgttcagctccagaaactggacc
atggagaacccgtccccgyactgtttctgcaccaccaacggcaggaagaggatgctgccg
gactgtcccgaaggagccgggggtctccccccacctgagatcaagctgagcgccaccgac
acgctgcagaacctgacaggaaggaacatctcagactacctggtgaagacgtactcgcag
atcatcgggaagagcctgaagaacaaagtctgggtgaacgagttcaggtacggaggcttc
tcattgggcgccaggagcacgcaggtcctgccgccggccaacgaaatcgatgatgccatc
gagagggtccgaaaggtgtttgagctaaagaagggagccgctgcggaccgattcctcgac
aacctgtcaggcttcatcaatggcctcgacaccaaaaacaacgtgaagatctggttcaac
aacaaaggttggcacagcgtggcagcgttcagcaacgtgatgagcaacggcatcctgaga
gccaacctgccgccaggtgaggaggccagcaggtacgggatcaacgccttcaaccaccct
ctgaacctgaccaaggagcagctgtcccaggtcgccctggtaaccacctctgtggacgtc
ctggtgtccatctgcgtcatcttcgccatgtccttcgtccccgccagcttcgtggtcttc
ctgatccaggagcgagtcagcaaagccaaacacatgcagttcatcagcggcgtgcacccg
ctgctctactgggtggccaacttcatgtgggacatgttaaactactttgtcccggcaata
ctcgtcatcctcatcttcatctgcttccaacaaaaagcctacgtgtcgtccagcaacctg
ccggtgctcgctctgctgctgctgctctacgggtggtccatcacgccgctcatgtacccc
gcctccttcttctttaagatccccagcacggcgtacgtggtcctcaccagcatcaacatc
ctgatcggcatcaacggcagcatctccaccttcgtcatggagctgttcggagatcacgaa
atcggcggcatcaacgacatcctgaagaatgtcctcctcatcttccctcacttctgtctc
gggcgaggacttatcgacatggtgaagaaccaggcgatggccgacgccctcgagagattc
ggtgagaacaggttccgctcgccgctggagtgggacatggtgggaaagaacctgctcgcc
atggctgtggagggcgtggtcttcttcatcatcaccatcttcatccagtaccgcttcttc
atcaagcccaggccggtaagtaaactcaccaaactgggagcactgggagaggaagatgaa
gatgtggcccgagagagacaccggatagtccagggccttggccagggggacatcctggag
ctccggcagctcaccaaggtgtttaagaggaagcagaagccggcggtggatcgactgtgt
gtcgggatcccacccggagagtgttttgggctgctcggcgtgaacggagccgggaaaacg
accaccttcaagatgctgaccggagacaccatcgtgaccagcggggaggccttcttagcc
gggaagagcatcctcagggagatcgacgaggtccaccagaacatgggctactgtcctcag
ttcgacgccatcaacgacctgctgacaggaagagagcacctggagctgtacgccgtcctc
agaggtgtccctgagcaggacgtctgcgacgtggcagagtggggcatcaggaagttgagt
ttgctgaagtacgcagacaaacgagcaggaagttacagcgggggcaacctgaggaagctg
tccaccgccatcgctctgatcggagcgccgccggtcgtcttcctggatgagcccaccacc
gggatggaccccaaggcccgccgagccctctggaactgcatccacagcatcatcaaggag
ggacgctccgttgtcctcacgtcccacagcatggaggagtgtgaggctctgtgcaccagg
atggccatcatggtgaacggcaggttcagatgtctcggcagcgtccaacacctgaagaac
aggtttggagacgggtacaccatcatcctgcgggtggcgggacccgacccggacctgcag
cccgtcatgaagttcatcgagagcgagctgagcggcagcacgctgaaggagaagcaccgc
aacatgctgcagtaccagctgccgtcctcgctcacctcgctcgcccacatcttctccatc
ctcggcaagaacaaggacacgctcaggatcgaggactactccgtcactcagaccacgctg
gatcaggtgtttgtgaacttcgcgaaggaccaaagcgatgactacgtgtccaaagacgca
tcggtgaggcggaaagacgtcgccatcaacattccagctttaagccccacccacgaaacc
agcatgagaggaggtgggcagcaggaaagcgtcatgtga
DBGET
integrated database retrieval system
