Austrofundulus limnaeus (annual killifish): 106520213
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Entry
106520213 CDS
T06063
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106520213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106520213
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106520213
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
HECT type E3
106520213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
106520213
NCBI-ProteinID:
XP_013867633
UniProt:
A0A2I4BIT4
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MFSWGQDSQRGFVLKGDSDSCRSSCRSSSGDGVHHLNIGCPVADLSAGLSVLAFVKNNGN
AFILRVNESRDGRRVRGKQKFVKFKEPIEAVSCQDDVVTFLSERGSVLCVDTTRTPYTPR
MLEVFANIPVAQVSCGSQHSVALTRDGQVYTWGLDSRGQLGLGRRNCGAGSPQHLQSLSS
VPVVRIAAGGERSFALSVSGGVLGWGRNDCGQLGLGDTKDRYTPTCLHSLNLKKSCDVSC
GKDHTAVLTKHGVVFTFGSGRHGQLGHNSFRDELRPRLVAELWGAKVAKVACGRNHTLVL
TDANKVYSFGCGDDGQLGHGEESHPSVPLPVSLPQDTDSQRVQNIFAGENCSFATCSSDE
GPQGSSTKVAQYGLEGVVDKWVSECDSKSWKKIQQEIHRSFSTASCLNKSFLEQRDKHFQ
TSSKYHGLNFKQARQFFKKLVKKSAVWEEVEAAVLRLLPLLDRNPVSMEGLRVFLLLNEL
LHVLQKHTAQQNTRLTEALAAAVTGLSVQSLQVLGNWWSSLSPSTMRRFIVMWKQALSLI
FTYDPVPRSSGVRNLLQVLQYMYNVNSRASAPRRLPESLFYLPLSENFLEDDLKTWSLRS
QNESWRAEPLVLCSFPMVMDLQAKMLVFDMNARLTMNKFQLSALEQVFRNIFLGLGIYSL
VSEFLELDVRRASVLKDAFEQLADTDHQDYRRQLVVRFDGNVLPSLVYQKDFFHEVFHEM
VSFESGMFMFNDSETLAWFSSRHQAADRDQRWYLFGVLCGLALYNQAIVYLPFPLVLFKK
LLGFKPSLEDMIEFSPKVGKSLRYILDDYPDDDLVDLDMVFTISWEATDVHLDTKNPNKQ
VTNQNKEEFVAAYVNYAFNTSVETVFEDFSRGFFHVCERDLVRLFRPEELQEILVGKDFQ
DWEKLKQNTSYEGEYHADHDNIRMFWEVFDELTEDQKKAFLWFVTGFERVPVLGLDKIEI
SIRVKYVPDLSSPDQYYPEAYTCYSFLELPLYSNKEILRSQLTEALSNNNQICKRSE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttctcctggggacaggacagccagcgcggcttcgtgctgaaaggcgactcggactcg
tgcaggtcctcctgcaggtcctcctcaggtgacggagtccatcacctgaacatcggctgc
cccgtggcggacctgtctgccgggctcagcgtcctggcttttgtgaaaaacaacggaaac
gcgttcattctgcgcgtgaatgagagcagagatggacgaagagtccgaggaaaacagaag
tttgtgaagttcaaggagccgatcgaggcggtgagctgtcaggacgacgtggtgacgttc
ctgtcagagagaggatcggttctctgcgtggacacaaccagaaccccttacacacccagg
atgctggaggtttttgccaacatcccggtcgctcaggtgtcctgtgggagccagcattca
gtcgccctgaccagagacggtcaggtctacacctggggtctggactccaggggccagctg
ggtctggggaggaggaactgcggtgccggttccccccagcacctccagtctctgtcctcc
gtcccggtggttcggatcgccgcgggaggagagcggagcttcgccctctccgtgtccggg
ggcgtgttgggctgggggaggaacgactgtggacagctgggactgggagacaccaaagac
agatacactccaacctgccttcatagtttgaatctgaagaaaagttgtgacgtttcgtgt
ggaaaggaccacacagctgttttaacaaagcacggtgtagtttttaccttcggttccggt
cggcacggccagctggggcacaactcgttccgggacgagctccgtcctcgactcgtcgca
gaactctggggggcaaaggtggcgaaggttgcgtgtggaagaaaccacaccttagttttg
acggatgctaataaagtttactcgtttggttgtggagatgacgggcagctgggtcatgga
gaggagagccatccgtccgttccacttcctgtttcactgcctcaggacaccgactcccag
agagtccagaacatctttgcaggagaaaactgttcctttgccacctgcagttctgatgag
ggaccacagggttcctccactaaggtggctcagtacggcctggagggcgtcgtcgataag
tgggtttctgagtgtgattcaaagtcgtggaaaaagattcagcaggaaatccaccgatca
ttttcaaccgcttcctgtttgaataaaagcttcttggagcaaagagataaacattttcaa
acctcgtcaaagtaccacggtctgaacttcaaacaggcccgacagttctttaagaaactg
gtgaagaaaagcgcagtttgggaagaggtcgaggccgcggttctgcgcctgctgcctctt
ctcgacaggaaccccgtcagcatggagggcctgagggtcttcctgctgttgaacgagctt
ctgcacgtcctgcagaaacacacggcgcaacagaacaccaggctcaccgaggcgctggct
gccgccgtgaccggcctgtccgttcaaagcctccaggtcttagggaactggtggtcttca
ctgtcaccttccaccatgaggaggttcatcgtgatgtggaagcaggcgctgtctctgatc
tttacttatgatcctgttcctcgcagctctggagtcagaaacctgcttcaagtcctgcag
tacatgtacaacgtgaacagccgggcgtcggcgcctcggaggctgcctgaaagcctgttt
tatttacccttgtctgaaaatttccttgaagatgacctgaaaacctggagtttacgatca
cagaacgagtcttggcgagctgagccgctcgttctctgcagctttccgatggtgatggat
ctacaagcaaagatgctggttttcgacatgaacgccaggctcaccatgaacaagttccag
ttgtctgcgttggaacaagtctttcggaatatttttttaggtttgggaatttatagtctt
gtatctgaattcttggagctggacgtgaggcgagcgtctgtgctgaaagacgcatttgaa
cagctggctgatactgatcaccaagactacaggaggcagctcgtggtccgttttgatggc
aatgttttgcccagtcttgtctaccaaaaagacttttttcatgaagtctttcatgagatg
gtgtcatttgaatcaggaatgttcatgttcaacgactctgagacgctggcctggttctcc
tccaggcaccaggctgcagacagggaccagcgctggtacctgttcggggttctgtgtgga
ctggctttgtacaaccaggccatcgtttacttacccttcccactggttctgttcaagaag
ctgctcggattcaagccttctctggaggatatgatcgagtttagcccaaaagttggcaag
agtctgcggtacattctggacgactacccagacgacgacctggtggacctggacatggtc
tttacaatcagctgggaggccacagatgttcatcttgatactaagaacccaaacaagcaa
gttaccaaccaaaacaaagaggagtttgtggctgcctacgtgaattacgccttcaacacg
tccgtggaaaccgtgttcgaggatttctcgcgaggtttcttccacgtgtgcgaacgagac
ctggtgagacttttcaggcccgaggagctgcaggagatactggtgggcaaagacttccag
gactgggagaagctgaagcagaacacgagttacgagggcgagtaccacgccgaccacgac
aacatacggatgttctgggaggtgtttgatgagctgacggaggatcaaaaaaaagctttt
ctttggtttgtgacgggatttgaacgagttcctgtcctcggattggacaaaatcgagatt
agcatcagagtcaaatacgtcccggacctctcgtctccggaccagtattatcctgaggcg
tacacgtgttactcattcctggagctgccgttgtattccaacaaagagatcctgcgaagc
caactgaccgaggctctgagcaacaacaaccagatctgcaagagatccgagtga
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