Austrofundulus limnaeus (annual killifish): 106520342
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Entry
106520342 CDS
T06063
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106520342
04121 Ubiquitin system [BR:
alim04121
]
106520342
Transcription factors [BR:
alim03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
106520342
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
106520342
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like
zf-BED
ZBED1_RNase-like_helical
DUF8247
FAM200-ZBED5_RNase-like
DBD_Tnp_Hermes
zf-C2H2-SPIN-DOC
OrsD
Motif
Other DBs
NCBI-GeneID:
106520342
NCBI-ProteinID:
XP_013867822
UniProt:
A0A2I4BJA9
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MDKDTAEGVVADVPFEDDSQEELVPKRGVVSFVWNYFGFKTSDANQTSVICKVCRSKIVA
AGGNTSNLQHHLXRKHKLEYEDFLKLKVAASTTKHGKASAGQSSQTSLADAFGKGTPYEK
KSKQWVEITNAITFHIAKDMVPLSAVEKEGFRALVKTLDSRYIIPSRKYFGQTSIPALYQ
EHREKLQTEVATVPHYATTADMWSSRTMELYLSLTVHFINEDWLLKSYCLQTSYFPNDHT
GELLAVGLQEALESWGLAENKLVAITTDIGTNIKKAAQINNWTRLQCFGHRLHTAIESGV
KDDRIHRAIGACKKVVSAFSYSWEKRRDLAVAQDELGLPKHILTTETPTRWGSRQKMIKR
VLEQEKAISQVLKSERKSRHLVLTWQDVDVLESINKLPS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggataaagatacagctgaaggagtggtggcagacgtaccatttgaggatgatagccaa
gaagaacttgtgcctaaaagaggggtagtttcttttgtgtggaattatttcggcttcaaa
acctcggatgccaatcaaacgtcagttatttgtaaagtctgtcgaagtaaaattgttgcc
gctggcggcaacacaagcaatctgcaacaccatctcahtcgcaaacacaaattagaatat
gaagactttttaaaacttaaagtggctgcttccacaaccaaacacgggaaagcttcagca
ggacagtcaagtcaaacatcacttgcagacgcgttcggcaaaggtactccttacgagaaa
aaaagcaagcagtgggttgaaataacaaatgccatcacttttcacattgctaaagacatg
gtcccgttaagcgctgtagaaaaagaaggttttcgagctcttgtcaaaacgctggatagc
cgctatatcataccaagtcggaaatattttggccaaacatcgatccccgcattgtaccaa
gagcacagagaaaagctacaaacagaggtggctactgtcccacactatgcgacgacagct
gatatgtggtcaagccgcacaatggagctgtatttgagcctgacggttcattttatcaat
gaagactggcttttaaaaagctactgtctccagacgagctacttcccaaatgaccacact
ggggaactgcttgctgtaggcttgcaggaagcactggaatcctggggactagcagaaaac
aagctagtagctatcaccacagacattgggaccaacatcaagaaggcagcccaaatcaac
aactggacaagactgcagtgcttcgggcacaggcttcacacagctatagagtctggtgtg
aaagatgatcggatacatcgtgccattggagcctgtaaaaaggtcgtttcagctttctct
tactcatgggaaaaaagaagagacctggccgttgcacaggatgaacttggtcttccaaag
cacatattgacaactgagacacccaccaggtggggatcacgtcaaaaaatgattaaaaga
gtacttgagcaggagaaagccattagtcaggttctcaaatcagagagaaaatcaaggcac
ctggtgctcacctggcaggatgtggatgtgctggagtccatcaacaagttgccaagctag
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