Austrofundulus limnaeus (annual killifish): 106520412
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Entry
106520412 CDS
T06063
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1-like
KO
K09173
regulatory factor X 1/2/3
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alim03000
]
106520412
Transcription factors [BR:
alim03000
]
Eukaryotic type
Other basic domains
RF-X
106520412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
106520412
NCBI-ProteinID:
XP_013867958
UniProt:
A0A2I4BJR2
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MATCRYSEDLQPQQASAVTMGTPATATPSSAKTEHFLSELPPATGTVSSAQAATASKSGQ
DALCSQAPPTQSQKPVVLTTPTQHYDIQQSAVQKSNGQSSPQYIIVTVSDGSAHSDSRSD
SSPPAPGVPTQVVQPMQTPPHRSVLQAVSQAAKRIQTGHINNLQSVHINQEVEHVYSGQV
QYVDGAGDANFTTSNIRSSSYPFSDSPLFSQTPPASSSTFFEATPSSESDITASVSSQAV
SVATAGASSGGAAAGGSGYVIQGSYPLGGGAGGGGGGQSYSSPNSRAPPATVQWLLENYE
GAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYY
GLRIKAGSSLLRLMEDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGTAAGSGQQQQQQQGS
GHVDISTQVQQYQQFLDASRALPEFPDIDLQGKTLPEGIELEHIKSFQLLYREHCEAIVD
VMVNLQFTLVETLWKTFWRFSQSQAGDGTLAVHDESEKRLPKSCLVLLCKYEPVLRWSRD
CDNSLYQSLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEEMVRIKVTSAN
AFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDRVVQ
RLEQDFKLTLQQQNSLEQWAVWLDGVVSQVLKPYQQSPAFPKAAKLFLLKWSFYSSMVIR
DLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRGLNTLDPD
KEEEEEEEEESEEEGQELSLPSDEAGLGEESLEPPAKLARTDQRVLFTTGSADNXPVTLV
CC
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctgtagatactctgaagaccttcagcctcagcaggccagcgcagtaaccatg
ggaacacctgccaccgccacaccctcatcagcgaagaccgaacacttcctgtccgagctg
ccaccagccactggaacagtttcatcagctcaagcagccactgcctctaagtcgggacag
gatgcactttgttctcaagccccgcccacccagagccagaagccagtggtcctaacaact
cccacacagcactacgatatccagcagagcgccgttcagaagagtaatggacagagctcg
ccccagtatatcatagtaacagtttcagatggctctgctcactccgatagtcggtcagac
tccagcccaccggcgcctggcgttcccacccaggtagtccaacccatgcagaccccccca
cataggtcagtgttgcaggcggtgtcgcaggcagccaagaggatccagacgggccacatc
aacaacctacagtctgtgcatattaaccaggaggtggagcacgtgtattcaggtcaggtg
cagtatgtggacggagcaggagatgcaaattttaccacctccaatatccgatcgagcagc
taccctttctccgactcgcccctcttttcccagactcctcctgcgtcctcctccaccttc
tttgaggccacgcccagctccgagtcagacatcaccgcatctgtgagctcacaggcggtt
tctgtggcgacagctggagccagtagtgggggcgcggcggcaggcgggtccgggtacgtc
atccagggaagctatccactgggaggaggagcgggcggaggaggaggaggacaaagctac
tccagcccaaactctcgggcaccacctgctactgtgcagtggctgcttgagaactatgag
ggggctgagggggtcagcctgcctcgctgcaccctctactaccactacctgctgcactgc
caggagcagaaacttgagcctgttaacgctgcatcctttgggaaactcataagatcagtg
ttcatggggcttcgcacgcgacgcctgggcacccggggtaattctaaataccactattat
gggctgagaatcaaggcaggctcttctctgctccgtttgatggaggaccagcaacatctg
gccatgaggcagcagccattctcacagaaacaaagattgaagcctgtgcataaagttgag
ggaatgacmaacggcacagcggcaggatcaggacaacagcaacaacagcagcagggttca
ggacatgtagacatcagcacccaggttcagcagtaccaacaattccttgatgcttccaga
gctctcccagagtttccggatatcgatctccagggaaagactctgccggaggggattgaa
ctcgagcacataaagagctttcagctgctttacagagaacactgtgaggccatagtggat
gtgatggtcaatctgcagtttacgctggtggagactctgtggaaaaccttctggaggttc
agccaaagtcaggctggagatggcaccctggctgttcacgatgagtcagagaagcgtctc
ccaaaatcctgcttggtgttgctgtgcaagtatgagccggtgctgcgctggagccgtgac
tgtgacaacagcctgtaccagagcctggtggagatcctcatccctgatgtcctcagacct
atccccagtgccttaactcaagccattcgaaactttgccaaaagcctagagagctggctg
actaacgccatgatgaacatccctgaggaaatggttcgcatcaaggtgacatcagccaat
gcatttgcccaaacgctgcgtcggtacaccagtctgaaccatctggcccaggcagcycgt
gccgtcctccagaacacggctcagatcaaccagatgctgtctgacctcaaccgtgtcgac
ttcgctaacgtccaggagcaggcttcatgggtgtgcaggtgtgaagaccgtgtcgttcag
cggctcgagcaggacttcaagctgaccctgcagcagcagaactcgttggagcagtgggcc
gtgtggctcgatggtgtggtctcccaggtcctgaagccctaccagcaaagccctgctttc
cctaaagctgccaaactcttcctwctaaagtggtccttctacagttccatggtgatccga
gacctcaccctgcggagcgcggccagtttcggttcctttcacttgatccgtcttctgtac
gatgagtacatgtattaccttatagagcacagagtggcccaggctaaaggagaaactccc
attgctgttatgggagagtttgccagtttaggtcgaggtctgaacacgctggatcctgac
aaagaagaggaagaggaagaagaggaggagagtgaggaagaaggccaggagctgtctctt
ccctctgacgaggctgggctcggagaggagtccctggagccgcctgctaagttagccaga
acagatcagcgagtcctcttcaccaccggctcagctgacaactarccagtgacactcgtg
tgctgctaa
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