Austrofundulus limnaeus (annual killifish): 106520511
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Entry
106520511 CDS
T06063
Symbol
u2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106520511 (u2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106520511 (u2af2)
Spliceosome [BR:
alim03041
]
Complex A
U2 snRNP components
U2 related factors
106520511 (u2af2)
Complex B
106520511 (u2af2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
106520511
NCBI-ProteinID:
XP_013868120
UniProt:
A0A2I4BK49
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MSDYDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSSPSSYPQDNAGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATAL
LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA
PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN
PSVYVPGTQTINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA
TGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTTINQTPVTLQ
VPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVREECGKYGQVKSIEIPR
PVDGLEIPGTGKIFVEFTSVFDAQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactacgacgaattcgaaagacagctgtctgaaaacaaacaagctgaaagggac
aaagagaaccgccatcaccggcggtcctcatcccgcagccgcagcagagagaggaagagg
aggagcagagacagggacagacgcagccgagaccgtcgtggagacagtaaggagcgaaga
cacaggcgcagctcaccatccagctacccccaggacaacgctggaagccgctctccgcat
cgtgagaagaagaagaaggtgaagaagtattgggatgttcctccacctggttttgaacac
atcacccccatgcagtacaaagccatgcaagctgcaggacaaatcccagccacagccctg
ctgccaaccatgactcctgatggcctggctgttactcccacccctgtacctgtggtgggc
agccagatgacccgacaggcccgtcgtctttatgtcggcaacatcccctttggtatcaca
gaggagtcaatgatggacttctttaatgctcagatgcgtttagggggtcttactcaggcc
cctggaaatccagttcttgcagtgcaaatcaaccaggataagaactttgccttccttgag
ttccgttcagtggatgaaacgactcaggccatggcctttgatggcatcatctttcaaggc
cagagtctgaaaattcgtcgtccacatgattaccagcccctgcctggcatgagcgagaac
cccagtgtctatgtgcctggtacacagacaattaatggcgttgtgtccacagtggtgcca
gactctgctcacaaactcttcattggtggtttgcccaactacctgaatgatgatcaggtg
aaggagctcttgacatcatttggccctctgaaggccttcaacctggtgaaagacagtgct
acaggcctctctaaaggatatgctttttgtgaatatgttgatgtcaacctgaacgatcag
gctattgctggactgaatggcatgcagcttggagacaagaagctcctggtgcagagagcc
agtgtgggatccaagaacgccactctgacgactataaaccagaccccggtgacgctgcag
gttccaggtctgaacagctctgtcactcagatgggcggcctgcccactgaggttctgtgt
ctgatgaacatggtggcccccgaagagcttttggacgatgaagagtatgaggagatcgtg
gaagatgtcagggaggagtgcggcaagtatggccaagtgaagagcatcgagatccctcgt
cctgtggacggcctggaaatccccgggactggcaagatttttgtggagttcacttcagtc
ttcgacgcccagaaggccatgcaggggctgacgggaagaaagtttgccaacagggtggtg
gtaacgaaatactgcgatccagatgcttatcaccgccgggacttctggtag
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