Austrofundulus limnaeus (annual killifish): 106520538
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Entry
106520538 CDS
T06063
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106520538 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106520538 (prpf31)
Spliceosome [BR:
alim03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106520538 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
106520538
NCBI-ProteinID:
XP_013868159
UniProt:
A0A2I4BK83
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MSLADELLADLEEAGDEGEDGLYPEDEEGESDGEGPQGRAEGGLEDIPEEMEVDYSKAES
VASIAKLRNSKQFSEIMDKISEYVGKQRKNSDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDALDYIRTVKELGNSLEKCKNNETLQQILTNATIMVV
SVTASTTQGSLLSEDELKQLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQSLPPDL
RRKAARLVAAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKESKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggcagacgagcttctggctgacctggaggaggctggagatgaaggagaggac
gggttgtatccagaggacgaagaaggagaaagtgatggagaggggccccagggaagggcg
gagggagggctggaagacattccagaggagatggaagtggactacagtaaagctgagagt
gttgcatccatcgctaagctccgcaacagcaaacagttttcagagatcatggacaaaatc
tcagaatatgtaggaaagcaacgtaaaaactcagatgtttcaggtccagtcgaggccgac
cctgaatacagactgatcgtagcggccaacaacctcacagtggagattgacaacgagctc
aacattattcacaagtttacaagagacaaatactccaagaggtttccagagcttgagtct
ttggtgccggatgcgttggattatatccgcacagtgaaggaactgggaaacagtttggag
aaatgtaaaaacaatgaaacgctgcagcagatcttgaccaacgctacgattatggtcgtc
agtgtgacggcatcgaccacacaggggtcattgctaagtgaggatgagctgaagcagctt
gaggaggcctgtgacatggccctggagctgaatcagtctaaacacaggatatatgagtac
gtagagtccaggatgtcttttatcgcccccaacctgtccattattgttggagcatcaact
gctgccaagattatgggtattgctggcggtctcactaacctttcaaagatgccagcttgt
aacctgatgctgctgggagctcagaggaggaccctgtctggcttcagcagcacgtccctg
ctgcctcacaccggcttcatctaccactgtgatgttgtgcagtcattaccacctgacctc
aggaggaaggcggctcgactggtagcagcaaaatgcactctggcttctcgagtggacagt
tttcatgagagctcagatggaaaggttggttatgatctaaaagaagaaatcgagaggaag
tttgataaatggcaggagcctccgccagtgaagcaggtcaaaccactgccggctccactg
gacggacagaggaagaagagaggaggaaggaggtatcgaaagatgaaggagcgtctcggt
ctgactgagatacgaaaacacgccaacagaatgaccttcgctgagattgaagacgatgcc
taccaggaggatctgggcttcagtctgggtcagctgggaaagagcggcagcggcagagtc
cgccaggctcaggtcaacgaggccaccaaggctaggatctccaaatcactgcagagaacg
ttgcagaagcagagcatgacgtacggaggaaagtccaccgtcagagaccgctcctcagga
accagctccagtgtagctttcactcctcttcagggcctggagattgtgaacccacaggct
gcagagaagaaggtggctgaagccaatcagaaatatttctccaacatggcagagttcctc
aaagtcaaaaaggaatccaagatgtaa
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