Austrofundulus limnaeus (annual killifish): 106520553
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Entry
106520553 CDS
T06063
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106520553
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Cadherin related
106520553
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_pro
Cadherin_2
RET_CLD1
Cadherin_4
DUF4232
SusE
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
106520553
NCBI-ProteinID:
XP_013868180
UniProt:
A0A2I4BKA4
LinkDB
All DBs
Position
Unknown
AA seq
3282 aa
AA seq
DB search
MKTVARRLGKFTIDPLHCENWWSTRILLMVYVALELLTLHPSFVLGTLELQLDEEQPAGT
VVGDISAGLPPGVTASLYFISDHEGTGVSSDLDIDESTGIIRTARVLDRELRDQYNFIAV
TMTGVTVDVTIKVNDINDHAPKFPRKRATFKIPEQTAIGTRFPLEPAVDNDKDQFTTQGY
LIKDGNVGQAFSLETRRGSNKVLYLDLMVNTILDREKRSTYTLFLEAFDGGSPKRTDQMT
LDITVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFATDDDEGDNGMVIYEINRRQSD
PDRYFVIDSRAGIITLNKPLDFEKRRVHELVVQAQDNATHPEVTNAFVTIHVRDYNDNQP
TMTIIFLSEDGSPRISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSI
IYLVCVDQILDREERDTYELRVMATDSGTPPLRAESSFTIQVTDINDNPPLFDQPVYRQV
IPEVVFPGSFVLQVTARDKDQGPNGDISYSILQDQSAYYSWFSIDSITGIITTLSQLDYE
KNPSPSITVVATDGGKPSLSSTAVVNILLQDINDNEPVFERHFYNVSIKENTAPGTCILE
VTATDADGGSFGSITYSLGSGSNSAVPSQFNIGKENGQICTTGVLDRDQGLDSFDFTVTA
VDGGGLSSVAYVKVDLVDINDNRPAFYPLSYAVSLSTQSAPGTSVVRVTAYDPDSGENGK
ITYKTVPGGASPYFTLNKDTGVISLSRSAYGKANSVITMIVTAQDGGGLFVLDHAKVNIS
VVAGLVAPPVFEQTQYYFTVSEDALRGTVVGIVQASSKTGISKGVSYTISSGDPASYFTV
DPDSGVIRTSLPLDHEIQSSVDLEVQAHSGNPPAFGQTRVHISIADINDNQPVFLPSSSE
SLLLPENTEMGAVVYRIQAEDRDSGVNGQLTFDLSSPSGIQRIFSVDRSTGEIRLVGSLS
YETNPRYDLLVVAKDNGVPQLSATFMLVVHVQAENEQGPVFDTLTYRVELKEGTPINTRF
LQVRALIREIQGSGHLTPLMYHLRPDGDAAGFGIAAESGWLFVKSALDRELKDMYILTVM
ASVGHGQLKKTGSATVRISVTDENDNYPRLTQEKVFMAVRENLPAGTGFGHVLATDRDAG
SNGRLNYRFLHPDRNFQINTHTGEISTRMTLDREQQSSYQLVVVVQDGGSPPCSVTGTIF
VTVLDDNDNDPAFIHSQSGKDIILQVTEGQAAGAVLGTLQAKDPDEGENSTLFYSLSGPR
AERFSLNAITGELHSSYPLIHSERAEYSLTVTATDRGLPPRSASCSLTIQVISIKRVTSK
TDLHSMFLNSVEETTPGSVIGSVRLHDRGTLEEGKVTYTVVGGTDKDGTFVVDHLTGDVY
LACPLDFEQNAQYNLKIEVDDFSQIPPSSTLVSLDIDIEDSNDHTPEFAEDPITIVISEN
METGSSVYTFQATDKDGSGPNSELMYSILHQWPNTPGLLTLDPITGVLSLGRKLDHEVTS
SLILVVKATDSPLNASQKRWGSVTARMYITDENDNPPEFISPTAVSVMEDQPVGFVVLFV
MARDADQGDNSRLTYRIQSGNTGGTFSLNSNTGSLSIFKPLDHEEQDIFNLTIVAEDHGI
PKRSSSQLLCVHVIDVNDEIPWFEESLYEAQISENEPAGTTVLTVSASDLDQGTNAYVTY
GGIAQGGFSINPVTGVITTSKPLDRESQDFYTVTVYAKDGGLPPNYAKATVKIKVLDVND
NAPVFGRLYYSIDVPENLEALPLFTLKATDFDAEKGGKISYIIAAGDPSGDFHLDRQSGV
LHTSRPLDREKRPGYTLTVIAHDQGQPPLSGTATVEVTVLDINDHSPQFQSSSYTADVSE
DVPIGSLVLEVKAIDLDYGLNSQVFYFLSQGSHSMFIVDQNTGRIITAAPLDREKTASYT
FEVCATDSSPTNPKNSTAQVTVYIQDVNDNAPFFIQDPLILNISTSSVSSRRVLATMRAE
DKDFGANGSVFYRFANPVRGFTINSLTGDIQATEKLQTMTQSQRTLIVQAMDQGNPAQSS
LGVVIIYIREQTYRGIRFSRTARDVSLQENAAKGTVVTQTQAQYPDGSKTGISYSIFSGN
RMQSFGINSITGEIWVQQSEGLDFEETPKLRLVVKAETASSISYMAVNLILQDINDNLPR
FQLQNYVAYIREAQGYDFPIIQVAADDLDQGQNGQVTYSIRSSSMSGLFKIDPLTGSIST
AAIMDREIWTQTKLVVVATDRGTPRLAGSATLTVIIIDLNDNSPMIPPPREIRVPEDTLI
GSVITRVTGNDVDSGPPLSYSLHLDANIQGMFGIHQYGGEVSLTGSLDYEERTWYTLTVR
SSDSKHQSEANLTILVDDVNDNAPTFTYDLYQVTISEHLPAGSSVITVTATDHDSGENGK
ITYKVMSSTKGDFFIDPSNGTLFIKHKTELTFEHSSILVVIEARDQGSPALSSIATVQVH
VSDINDNAPIFHQSEYRATVSEDGLPGSTVLTLEAMDGDLFRENCGFDFAIASGNSGNAF
QIESSVRFLEGRGFQTIGSLILAEKLDFEVVPSYNLTVVVTDRGIPQHSSSVPILISVMD
TNDNPPAFSRTAYSIVLSESTTAGTEILHLSATDPDSTPNGEVQYSISSGDETHLFKVDH
WTGVLRLQRPLDSNIKQSHLIVIQATDGQGYYALAPVTIEVKDINNNRPFFPLKLVTASI
RENQPQNALVTMLHAIDHDRGVFGQLNYYMVDSAKAEREGFFINQTSGEVRTRSMFDFEK
TNFFHFVAVAMDAANYSASVTVQVYVTGEDEYDPVFIASEFSFEVPEGAKKGQIIGTVQA
RDEDGGIDGIVLYSLSDHSPYFEVNKSTGSISLKVDSNSRHVSRSKREVRLITLDVTAQS
PHETSRTAVVKVIIDVSHTSFGLSTEINMLLVSVVAVSLGTIIILTVVAVMLFFVKLRNQ
KREQNTHKQKTISGTLLHKLQETKFSANEIIYHQALPGYASDQSGNSGGPYTRGGSLDPS
HSSGRGSAEAEAAEDDEIRMINEYPRVSSISSSIQERISARGPDSGIQQDADQLSDVSGE
PSLDWFKGKKLGSVNGTLIAGQVPVYRDDRGVYVGVGRGLSISQPKDYTFPEDGKPPVDG
SLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDETAPPHPRRSFHHKAKA
ESRIDPPPLITSVAHPGAKTVPPKPAISRTFPLLASFRRSPISTDGSISSVAMSPSFSPS
LSPLAARSPAITPFSVSQGPSASLISTNEHSFEHSEEADLRI
NT seq
9849 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagttgccaggagactggggaagtttacgatagatcctttacactgtgagaat
tggtggagcacacggatacttctaatggtgtatgtggccttggagcttttaacactccat
ccatcttttgtccttggtacccttgaactacagctagacgaggaacaaccagcaggaaca
gtggtgggagacatcagtgcaggacttccccctggtgtcacagcttccttgtacttcatt
tcagaccatgagggcacaggagtgagcagtgatttggacattgatgaaagcacaggcata
attagaactgctagggttctggacagagaattgagagatcaatacaacttcattgcagtc
accatgacaggtgtgactgtagacgtaaccatcaaagtgaatgatataaatgatcatgca
cccaagttccctcgtaaaagggctacatttaaaattcccgagcagacagcaattggcacc
agatttcctcttgagccagctgttgataatgataaagaccagttcacaacacagggctac
cttatcaaggatggaaatgttgggcaagcattcagcttggagacaaggaggggaagcaat
aaggtcctctatttggacctgatggtaaataccattctagatcgagagaaaagatccacc
tacaccttatttttagaggcttttgatggaggttccccaaaaagaacagatcagatgaca
ttagatattactgtacaagacattaatgacaatgctcctgttttcaatcagagccgctac
catgctatcatatctgagaacctccaaccaggaagcaacatcctgcaggtgtttgcaaca
gatgatgatgagggagataatgggatggtgatatatgaaatcaacagaagacagagtgac
ccagaccgctactttgtcatagactctcgtgctggcatcatcactttgaacaagcccctg
gactttgaaaagaggagagtccatgaacttgtagtccaggctcaagacaatgcaacccat
ccagaagtgaccaatgcgtttgtcactatacatgtcagagattataatgacaaccagccc
acgatgaccatcatctttctgagtgaggatggatctcccagaatctcagaaggtgcacag
cctggtcagtatgtagcacggatatcagtcactgacccagactatggagagtatgccaat
gtcaatgtgtcattagagggaggggatggaaagtttgccctgaccacaaaagatagcatt
atatatcttgtctgtgtggaccagattctggaccgtgaggagagagacacttatgaacta
agggtgatggcaacagactcaggtacacctcccctcagggctgagtcctcttttaccatc
caagtgactgacatcaatgacaaccctcctctgtttgaccagccagtgtacagacaagtc
atccctgaagtagttttcccagggagctttgtgttgcaggttactgcaagagataaagac
cagggacccaacggagacattagctacagcatccttcaagaccagagtgcttattacagc
tggttcagtatagactccattacgggcattattaccactttatcccagctggattatgaa
aagaaccctagtcccagtataactgtagtggctacagatggtggaaaaccatctctttca
tcaactgctgtggtaaacatcttacttcaggatataaatgacaatgagcccgttttcgag
agacacttctacaacgtgtccatcaaggaaaacacagctccagggacctgcattctggag
gtgactgcgacagatgcagacggtggctcctttggctcgatcacctactctcttggctct
ggcagtaacagcgctgttccctctcagtttaatattggcaaggaaaatggccagatctgc
actactggtgtactagacagggatcaagggctggacagtttcgactttactgttactgca
gttgacgggggtggactgagctccgtagcctatgtgaaagtagatctggtcgacattaat
gacaacagacctgctttctacccactcagctacgctgttagtttgagcacacagagtgcc
cctgggacatctgttgtcagagtgacagcctatgacccagactcaggcgagaatgggaaa
attacttacaaaacagtacctggaggagcatcgccatactttacactcaataaagacaca
ggtgtcatctctctgtctcgctctgcctatgggaaggccaactctgtcattaccatgatt
gtcactgctcaagatggtggaggtctgtttgtattagaccatgctaaggttaacatcagt
gtggtagcagggctggtggcaccacctgtatttgaacagactcagtactactttactgta
tctgaagacgccctgcgtgggacagttgtaggcattgtccaagccagcagtaagacaggc
atttccaagggtgtctcctacaccatcagctctggggaccctgcaagctactttactgta
gatcctgacagtggagtcataagaacaagtctgcccctggatcatgaaatccagtcatct
gttgacttggaggtgcaggctcacagtggcaaccccccagcgtttggccagactcgtgtc
cacatctccatcgccgacatcaatgataaccaacctgtttttctgccctcatcctctgag
tcccttcttctaccagaaaacacagaaatgggtgcagtggtgtatagaatccaagctgag
gacagagactctggtgttaatggacagctcacctttgatctttcctctccaagtggaatc
cagagaatcttcagtgtagatcgcagtaccggagagatccgattggtggggagcctttcc
tatgaaacaaacccacgttacgatctcctggtggttgccaaggacaatggagtaccccag
cttagcgccacctttatgcttgtggttcacgtccaagcagagaatgaacagggacctgtg
tttgacaccctcacctaccgcgtggaactaaaagaaggaacaccaataaacacacgcttc
ctgcaagtaagagctttgatcagagagatccaaggctcaggtcacctgactcctttgatg
tatcacctccgtcctgatggagatgctgcagggtttggtatagctgcagagagtggttgg
ctgtttgtgaagagtgcccttgatagggaactgaaggatatgtatattctgacagtaatg
gccagtgtgggtcatggacagttaaaaaagacaggcagcgctacagtccgaatatcagtg
actgatgagaatgacaactaccctcggctcacgcaggagaaagtatttatggctgttaga
gaaaatctgcctgcgggaacaggttttggacacgtgttagccaccgacagagatgctggc
tccaatgggcgtctcaactaccgcttcctgcatcctgaccgcaacttccagattaacacc
cacacaggtgaaataagtacaaggatgactcttgacagagagcagcagtcaagctatcag
ctggtggtggtggtacaagacggtggttcgcccccttgttctgtgacgggcaccatcttc
gttacagtccttgatgacaacgacaatgaccctgcttttatccacagccagtcgggcaaa
gatatcatattacaggtgacagaaggtcaggctgctggggctgtgctgggcacactgcaa
gccaaagatcctgatgaaggggagaacagcaccttattctactctttgtcaggtcccagg
gctgagcgcttctctttaaatgcaatcactggtgaactgcattcatcataccctcttatt
cactcagaacgagctgaatactctctgacagtgacagccactgacagaggactgccccct
cgcagtgcctcctgctccctcaccattcaggttatcagcataaagagagttacctctaag
accgatttacattctatgtttttaaactctgtggaggagacaactcctggctcagtgatt
ggttctgtgcgtctccatgacagaggaaccttagaagaaggcaaggtgacctacacagta
gttggtggtacagataaggatggaacctttgttgtggaccatctaactggggatgtgtac
ttggcttgtcctcttgactttgagcaaaacgcacagtacaacctgaaaattgaggtggat
gacttttctcagatccctcccagtagcacactcgtcagcttggacattgacatagaagac
agcaatgaccatacccctgaatttgctgaggaccctataaccattgtcatatctgaaaac
atggagactggctcttctgtctacactttccaggccacagataaggatggcagtgggccc
aacagcgagctgatgtactccattcttcaccaatggccaaacacccctggccttttaact
cttgaccccatcaccggtgttctctcattgggtcgcaagttggatcatgaggtcacgtcc
tcattgatccttgttgttaaagcaaccgactcacccctcaatgcgagccagaagcgctgg
ggttccgtcacagcgaggatgtatatcaccgatgagaatgacaatccaccagagttcatt
tcaccaacggctgtcagtgtcatggaggaccagccagtgggctttgtggtgctttttgtc
atggctagagatgcagaccaaggggataatagtcgattgacttatagaatccaatccggc
aacactggagggacattcagcctcaactcaaacactggttctctgtctattttcaaacct
ctggaccatgaagagcaggacatctttaacctcacaatagtcgctgaggatcatgggata
cccaaacgctcgtccagccagctgttgtgtgtccatgtgatagatgttaatgatgagatt
ccctggtttgaggagagcctgtatgaagcccaaatttctgagaatgaacctgcagggacc
actgttttaacagtgtctgcatctgatctggaccaaggaaccaatgcatatgtgacatat
ggtggtattgcacagggaggttttagcatcaacccagtcacaggtgtcataaccacctct
aagccattggacagggaatctcaggatttttatactgtgacagtttatgcaaaagatgga
ggccttccacccaactatgctaaagcaacagtgaagatcaaggtacttgatgttaatgac
aatgcccctgtctttggacggctctactatagcattgatgtgcctgaaaacctggaagcg
ttgcctctgttcactctaaaagccactgacttcgatgcagaaaaaggagggaagataagc
tacataattgcagctggtgatccatccggagactttcaccttgacagacagtcaggagtg
ctgcatacttcaaggcctctggatcgggaaaagagacctgggtatactctaacagtcata
gcccatgatcagggccaaccgcccctcagtggcactgccactgtagaagtgacagttctg
gacatcaatgaccacagcccacagtttcagagcagtagctatactgctgatgtttctgaa
gatgtccccattggctcactggttctagaggtgaaagccattgatttggactatggactt
aacagccaggtcttctacttcctaagccagggctctcacagcatgttcatcgtagaccag
aacacaggtcgcatcatcacagcagcccccctcgacagagaaaaaactgcctcttacact
tttgaagtgtgtgccactgattcctcccccacaaaccccaaaaattcaactgctcaagtt
actgtctacatacaagatgtaaacgacaatgccccgttcttcattcaggacccacttatt
ttgaacatctccaccagtagtgtgtccagccgtagagtactggccaccatgagggcagag
gacaaggactttggggctaatggctcagttttctatcgttttgccaaccctgtgaggggc
tttaccattaattcactgacaggagacatccaggccacagagaagctgcagactatgaca
caaagccagagaactttgatagttcaggccatggatcaaggaaaccctgctcagtcttcc
ctgggcgtggttatcatttacataagggaacaaacgtacaggggtattcgcttctcccgc
acagccagagatgtcagtctgcaagaaaatgcagccaaaggcacagtagtaacacagact
caagcccagtaccctgatggctctaaaactggtatcagctacagcatttttagtggaaac
agaatgcagtcttttgggatcaactccattactggtgaaatatgggtccagcaatctgaa
ggacttgattttgaagagacccctaaactccgcctggtggtgaaagctgagacagcgtcc
tccatctcctacatggctgtcaacttaattctgcaggacataaatgacaacttgccacgc
tttcagctgcagaactatgtagcatacataagagaggcacagggctatgattttcctatt
atccaggttgctgctgatgacttggaccagggtcaaaatggtcaggtgacctactctatt
aggtcatcatccatgagtggcttgtttaagatcgaccccttgactggcagcatctccact
gccgccataatggacagagagatctggacgcaaacaaagcttgttgttgtggcaacggac
cggggaaccccacgactggctggctctgccacgctcactgtgatcatcattgacctcaat
gacaacagtcctatgattcctccgcctcgtgagatccgggtgcctgaggacactctcatt
ggctcagttatcacccgagtaacaggaaatgatgtggattctggtccacccctctcctat
tcactacatctggatgcaaacatccaaggcatgtttgggattcatcaatatggaggagag
gtgtctttgactggctcattggactacgaggaaaggacgtggtacactctgacagtccgc
tcatcggactctaaacatcaaagcgaggctaacctcactatccttgtggatgatgtgaat
gataatgcccccacttttacttacgatttataccaggtgactatatcagagcacctccca
gcaggcagttcagtgatcacagtaacagccactgaccatgactctggagagaatggaaaa
ataacctacaaagtaatgtcatcaacaaagggtgatttcttcattgacccaagcaatgga
actctcttcatcaagcataaaacagaactgacatttgagcattcctccattcttgtggtg
attgaggcccgggaccagggttctccagctctgtcatccattgccactgtgcaggtccac
gtttctgacatcaatgacaatgctcccatcttccaccagtcagagtacagagccactgtg
tccgaggatgggctacctggatcaactgttctaactctagaagcaatggatggagacttg
ttccgggaaaactgtggctttgattttgccattgctagtgggaactctggtaatgccttc
cagattgagagcagtgtgcgcttcttggagggccggggcttccagacgattggtagcctg
atcctggcagaaaaactggattttgaagtagttccaagttataacctgacggttgtggta
acagaccgtgggatccctcagcatagctccagcgtacctatccttatcagtgttatggat
actaatgacaaccctccggcgttcagccgaacagcttacagtatagttttaagtgaaagt
accacagcagggaccgagattttacacttatctgccacagatccagattctacccccaat
ggagaggtgcagtactcaataagctctggagatgagacacacttgttcaaggtggaccat
tggactggagtcttgagactgcagagacctctagacagcaatataaagcaatcccatttg
attgttatccaggctactgatgggcaaggatattatgctttagctccagtcactattgaa
gtaaaggacataaacaataacaggcccttcttccccctaaagctagtgactgcaagcatc
agggagaaccagccccagaatgccttagttaccatgctgcatgctattgaccatgacaga
ggtgtttttggacagctgaattactacatggtagatagcgccaaagcagaaagagagggc
ttttttattaaccaaacatcaggcgaagtacgaactcgctccatgtttgactttgagaaa
acaaatttctttcattttgtggcagttgctatggatgctgccaattattcagcatccgtg
acggtgcaggtttatgtcacaggggaggatgaatatgatcccgttttcatcgcctccgag
ttctcatttgaagtgcctgaaggagctaagaaaggtcagatcattggcacagtacaagcc
agagatgaagatggaggcattgatggcattgtcctctactcattatcagatcattcgcct
tactttgaggtcaataaatcaactggatcaatttctttaaaggtggacagtaacagtaga
cacgtcagtcgctctaaaagagaggtgcgcctaataactctggacgtgactgctcaaagc
cctcatgagacttcacgaactgcagtggtcaaagttataatagatgtgagccatacctct
tttggtctcagcacagaaattaatatgttgctcgtcagtgttgttgcggtttcacttggc
accataatcatactcacagtagttgctgtgatgctgttttttgttaagttgagaaatcag
aagcgtgagcaaaatactcataagcaaaagactatttcgggcaccctgttgcacaagctt
caggaaacaaaattttcagcaaatgaaattatttaccatcaggctcttcctggatatgcc
tctgatcaaagtggcaactctgggggtccttacactcgtggtggttccttggatccctcc
cattccagtggtcgtggctctgcagaggcagaagctgcggaggatgatgaaatcagaatg
attaatgaatatcctcgggtgtcaagcatctcctcttccatccaagagcgcatctctgcc
agaggtccggactccgggatccaacaagatgcagatcagctctcagatgtgtccggtgag
ccttccttagactggttcaaagggaagaaactgggcagtgtgaatgggactttaatagct
ggccaggtgccagtctacagggatgatcggggggtgtatgtgggtgtggggcgaggactc
agcatctctcagcctaaagactatactttccctgaggacggaaagcctcctgtggacggc
tccctcacggccattgtggccagtgatgaggagctgaggggcagctacaactgggattac
cttctgaactggtgtccccagtttcaacccttagctaatgtttttactgaaatagcacgt
ttaaaagacgaaactgcgcctcctcatcctcgtaggtcatttcatcacaaagcaaaagca
gagtcaagaattgatcctccgcctctaataacctctgtggcccaccctggggccaaaact
gtacccccaaagcctgctatatccagaactttccccctactagcctctttccgcagatct
cccatcagcactgacggatcaatctcttcagtcgcaatgtctccaagtttctccccttct
ctttcaccactagcagcacgttcacctgcaatcacacccttcagtgtctcacagggaccc
tctgcctccttgattagcacgaatgaacacagttttgaacacagcgaggaggcagatttg
aggatttga
DBGET
integrated database retrieval system
