Austrofundulus limnaeus (annual killifish): 106520673
Help
Entry
106520673 CDS
T06063
Symbol
top3a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03440
Homologous recombination
alim03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
106520673 (top3a)
03460 Fanconi anemia pathway
106520673 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alim03032
]
106520673 (top3a)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106520673 (top3a)
Enzymes [BR:
alim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
106520673 (top3a)
DNA replication proteins [BR:
alim03032
]
Eukaryotic type
DNA Topoisomerases
106520673 (top3a)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
106520673 (top3a)
FA (Fanconi anemia) pathway
106520673 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
DUF903
Motif
Other DBs
NCBI-GeneID:
106520673
NCBI-ProteinID:
XP_013868337
UniProt:
A0A2I4BKR8
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MLILHLLGRSSLRSGLTRLQQRCFWGSRSVRCPETRQQGSDMIRSWAQIKRVLCVAEKND
AAKGISEIMSNGRARRREGLSKFNKIYEFEYHLFGQNVKVTTTSVSGHLLALEFKAPFQK
WHSCNPVLLFDAEVEKYCPDNMIQIKRTLEREARQCQALIIWTDCDREGENIGFEVIDVC
RTVNPNLQIFRAKFSEITPNSIRRACETLAEPDSNVSDAVDVRQELDLRIGASFTRFQTL
RLQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEDTVEFN
WKRNRLFNHTACLVLYQICMEDPIATVTSVTRKPKSKWRPLPLDTVELEKLASRKLGINA
KETMKIAEKLYTQGYISYPRTETNIFPATLALAPLVEQQTHSQEWGTFAQRVLDQPGGPN
PRQGRNSDQAHPPIHPTKFTNALQGNEARVYDFIARHFLACVSQDALGQETVVDIDIAHE
KFSASGLMIIAKNYLDVYPXDKWSAKVIPVFEQDSQFQPSAIEMVDGQTSPPQLLTEADL
ISLMEKHGIGTDATHAEHIETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPN
LRAELEADLKLVSEGKKDKHSVLQHHVQKYKTVFIESVRKAKKLDEALVPYLGAPQEITE
VEQQDMEIPLPVRKCPSCGRDMVLKKKREGNSKFLTCVGYPACKTAVWFPETVLDVSRDE
SVCPTCQPSPVHMLKLKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRARGGGGGD
PPALRPPGAPSSNPRPSLPPVSSWTPQPRPPPDGGGVCVETGGDAIVCNCGQDATLLTVR
KDGPNQGRQFYKCNSGSCNFFLWADQPGLQQSQGPSLSAQRGPQPLRPSVGFRNTPSGGR
GQEACAAEHVGHTMCKCNEAAVTRTVQKDGPNKGRMFHTCGKPRDQQCGFFQWTDENGST
QGDSGGLNSAGDRGKKGRKTAADDPANRPPAAKRPRACSICHVPGHTRVTCPQR
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgctgatactgcacctcctcggaagatcctcgcttcggtcgggtctaacgcggcttcag
cagaggtgcttctgggggtcccggagcgtccggtgccctgaaacacggcagcaggggtca
gacatgatccggagctgggctcagatcaagcgggtcctgtgtgttgctgagaagaacgat
gcagccaaagggatctctgagatcatgtctaatggcagagcgaggaggagagaaggactg
tcaaagtttaataaaatatacgagtttgaatatcatctctttggccagaatgtgaaggta
acaacgacgtcagtgtcaggacatttacttgctttggagtttaaggcaccattccagaaa
tggcacagttgcaatcctgtgttgctgtttgatgcagaggttgagaagtattgtccagat
aatatgatacaaataaagaggactctggaaagggaagcgcgtcagtgtcaggccctgatc
atctggaccgactgtgacagggagggagaaaacataggctttgaagtgattgatgtttgc
agaacagtgaaccccaatttgcaaatctttcgagcaaagttttccgagatcacccccaac
tcgattcggagagcctgcgagacgctagcagagcctgattctaacgtcagcgatgctgtt
gatgtccggcaggagctggatttacgaatcggagcatcattcactcgattccagacgctt
cgtctgcagaaaatcttcccagaatcccttgccaatcagctcatctcctacggcagctgt
cagtttcccactctgggcttcgtggtggagcgcttcaaagccattcaggccttcattcct
gagacgttctacaagatcaaagtgcttcatgaagtcgaggaggacactgtggagttcaac
tggaagagaaaccgtctctttaatcacacggcttgcctcgtgctctaccagatctgcatg
gaggatcccatagcaacagtcacctcagtaaccagaaaacctaagagcaaatggagacca
ctgcctttggacactgtggaactggagaagctggcatctcggaagctcggaataaacgcc
aaagagaccatgaaaattgctgaaaaactttatacacaaggctatatcagctatccccgc
acagaaaccaacatttttcctgccactctcgccctggcccccctggtggagcagcaaacc
cacagccaggagtgggggacatttgcccagcgggtgctggaccagccggggggacccaac
ccacggcagggcagaaactccgaccaagcccaccctcccatacatcccaccaagttcacc
aacgcgctgcagggtaacgaagcacgagtgtatgacttcatagctcggcacttcctggcc
tgtgtatcccaggatgctttggggcaggagacggtggtggacatcgacatcgctcatgag
aagttctccgcctctggcctgatgattattgcaaagaattatctggatgtttacccctar
gacaagtggagcgcaaaggtgatcccggtgtttgaacaagactcccagtttcagccctcc
gccattgagatggtggatggacagacgagtccaccgcagctgctcactgaagctgacctc
atatccctgatggaaaagcacggcattggcacagatgccacacatgcagagcacatcgag
accatcaagagccgaatgtatgtgggtttgactgcagaccagaggtttcttcctggagag
ctcgggatgggactagtggagggttacaactctatgggctacgagatgtcgaaaccaaac
cttcgcgctgagctggaggccgacctcaagctggtgtcagaaggcaagaaggacaaacat
agcgtgctgcagcatcacgttcagaaatacaagaccgtcttcatcgagtctgtcaggaag
gctaaaaagttagatgaagctctggttccatatctgggtgcacctcaggagatcactgaa
gtcgaacagcaggacatggagatcccgctgccggtgaggaagtgtccgagctgtggtcgg
gacatggtgctgaaaaagaagagggagggaaacagtaagtttctgacgtgtgtgggatac
ccagcctgtaaaacagccgtatggtttcctgaaacggtgctggacgtcagtagagatgaa
agtgtttgtcccacatgtcagccgagtcctgttcacatgttgaagttgaagtttcgtaga
ggcagccttcctcccatgatgcctcttgaatttgttggctgcattggtggttgtgatgag
acgctcagagaggtgctggatctcaaatacctcagggcaagaggaggaggaggaggggac
cctccagctttaaggccacctggagctccaagttccaatccccgcccctcacttcctcct
gtctcttcctggactccgcagccaagacctccaccagatggcggtggcgtgtgtgtcgag
accggcggtgacgccatcgtgtgcaattgcggtcaggacgcaaccctcctcaccgtgcgc
aaagacgggcccaatcaaggtcgccagttctacaagtgcaactctgggagctgcaacttc
ttcctgtgggcggaccagccggggctgcagcagagccaagggccctcgctgtcagcgcag
aggggcccccagcctctgaggccatctgtggggttcagaaacacgcccagtggtggcaga
gggcaagaggcgtgcgcggcggaacacgtgggacacacaatgtgcaaatgcaacgaggcg
gcggtgacgcgcacggtgcagaaggacgggcccaacaagggccgcatgttccacacctgt
gggaaaccacgagatcagcagtgtggcttcttccagtggacagatgagaacggatcaacg
caaggtgattccggtggcttaaactctgcaggagacagagggaagaaagggaggaagacg
gcagcggacgatcccgctaacagacctcctgccgctaagaggccacgagcctgcagcatc
tgccacgtcccgggacacacccgagtcacctgtccccagcggtga
DBGET
integrated database retrieval system
