KEGG   Austrofundulus limnaeus (annual killifish): 106520888
Entry
106520888         CDS       T06063                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03082  ATP-dependent chromatin remodeling
alim03083  Polycomb repressive complex
alim04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106520888
   03083 Polycomb repressive complex
    106520888
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    106520888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:alim03036]
    106520888
Chromosome and associated proteins [BR:alim03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     106520888
  Histone modification proteins
   HAT complexes
    HATB complex
     106520888
   HDAC complexes
    Sin3A-HDAC complex
     106520888
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     106520888
    PRC2.2
     106520888
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     106520888
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106520888
  Chromatin remodeling factors
   NuRD complex
    106520888
   NuRF complex
    106520888
   NuRF complex (fruit fly)
    106520888
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 ANAPC4_WD40 WD40_RFWD3 Beta-prop_RIG_1st eIF2A Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 MIOS_WD40 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 106520888
NCBI-ProteinID: XP_013868635
UniProt: A0A2I4BLL7
LinkDB
Position
Unknown
AA seq 426 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
TVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDTSHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPDLRLKGHQKEG
YGLSWNPNLNGNLLSASDEHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAA
ELEAQG
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggctgataaagaggtgtacgatgatgcggtggaagaaagagtcatcaatgaagagtac
aagatctggaagaaaaacaccccgtttctctacgacctggtgatgacacatgcsctggag
tggcccagcctcactgtccagtggcttccagatgtcaacaggccagagggaaaagactac
accgtccaccggttggttttggggacccacacatcagatgagcagaaccaccttgtgatt
gccagtgtccaggtaccaaacgacgatgcccagtttgatacctcgcactacgacagtgaa
aaaggagcagaatttggtggatttggatcagtgagtggaaaaattgaaatagagatcaaa
atcaaccacgaaggagaagtgaaccgagcacgctacatgccccagaatccctgcataatc
gccaccaagacccccacgtctgacgttctggttttcgactacactaagcacccatcaaag
ccagatcccagtggggagtgtaatcctgacttgaggctaaaaggccatcagaaagagggc
tatggcctatcctggaatccaaatctcaatggcaacctactcagtgcctctgatgarcat
accatctgtctgtgggacattggcgccggcccaaaggaagggaagatcgttgacgccaag
accattttcaccggtcatacagcagtggtggaagacgtttcctggcacttactccatgaa
tccctgtttggctctgttgcagatgaccagaaactaatgatctgggacactcggtctaac
aacacctctaaagccagtcactcagtcgatgctcacactgctgaggtcaactgcctcagt
ttcaacccctacagcgagttcattcttgctactggctctgccgataagaccgttgctctg
tgggatctaaggaatctcaaactgaagctccactcttttgagtcccacaaagatgaaatt
ttccaagtacagtggtctcctcacaatgagaccatcctggcctccagtggcactgatcga
cgtctcaatgtctgggatctcagtaaaattggagaggagcagtctgcagaggatgctgag
gacggcccaccagagctcctgtttatccatggaggccacacggccaaaatatcagacttc
tcctggaacccaaatgaaccctgggtaatctgctctgtgtctgaggacaacatcatgcaa
gtttggcaaatggccgagaatatctacaatgatgaagaaccagacaacacccccgctgca
gagctggaggctcaaggatga

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