Austrofundulus limnaeus (annual killifish): 106520917
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Entry
106520917 CDS
T06063
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
alim00536
]
106520917 (slit2)
Glycosaminoglycan binding proteins [BR:
alim00536
]
Heparan sulfate / Heparin
Axon guidance molecules
106520917 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
LRR_1
LRRCT
hEGF
DL-JAG_EGF-like
JAG1-like_EGF2
EGF_3
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
106520917
NCBI-ProteinID:
XP_013868686
UniProt:
A0A2I4BLR4
LinkDB
All DBs
Position
Unknown
AA seq
1593 aa
AA seq
DB search
MVGALCPAGFGRSLETARRLLLLLVTVLVLVLFRGADGQPCPPQCSCTGTTVDCHGQGLR
SVPRNIPRNTERLDLNANNLTKITKADFAGLRHLRVLQLMENKITTIERGAFQDLKELER
LRLNRNNLAVFPELLFLGTTKLYRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIE
DGAFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQR
PRLGLYTQCMAPPHLRGHNVAEVQKKEFVCAGHQSSSSSSSCSVLQCPESCTCSNNIVDC
RGKGLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQG
LRSLNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDN
KLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANK
RIGQIKSKKFRCSAREQYFIPGVHHVGCTEDYRSKLGGDCFADLACPEKCRCEGTTVDCS
NQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRISDIEEGTFEG
ASGVNELILTSNKLENVHHHMLKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDN
QITSMNPGAFDTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQNPYFLKEI
PIQDVAVQDFACEDGNNENSCSPVLRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTELY
LDGNHFTQVPVELSDYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRA
FDGLKSLRLLSLHGNDISLIPEGAFKDLSSLSHLALGANPLHCDCHMQWLSDWVKSGYKE
PGIARCAGPGDMTDKLLLTMPSKKFTCTEVLGPCGFLVTGPVDLSIQAKCDPCLSNPCNN
DGTCANDPVHYYRCTCPYGFKGQNCEEPIHACISNPCHNGGTCHLKEGEGSNFWCVCPEG
FEGDACEINIDDCEDNDCENNSTCVDGINNYTCMCSPEYTAATNEVERGELCEEKLDFCA
PELNPCQHDSKCILTPQGYKCECTPGYVGEHCELDFDDCEENKCQNGGHCIDAVNGYTCI
CPEGYSGLFCEFPPPMVLPRTSPCDNHECLNEAQCIVVGADPQCQCPHGYEGERCETLVS
VNFVNRESYLQLPSSLLSPQTNISLQIATDEDSGVLLYKGDNDHIAMELYRGRLRVSYDT
GSYPPSAIYSVETVNDGSFHSVELVASDQTLTLSIEGGAPKSINSISKQSTLNIDSPLYV
GGMPERVSGGLSALQLSSGGRNGTSFHGCLRNFYINGKLQNLGAGLDRKGSGSGTSQRSS
QWLGNGVEPGCQPCQRGVCVQGDCHPTGHRGFTCTCRLGWTGALCDQQVSNACDGNKCIH
GTCIPINSYSYSCRCQPGFAGVLCDEQDPAAAKPCSLSRCKHGKCRVSGLGQAYCECDSG
YTGEACDREVACRGERVRDVYQRQQGYAACQTQEKVSRLECRGSCPGGAEGQGTCCTPLR
SKRRKYTFQCTDGSSFVQEVEKVVKCGCTKCSS
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctctgccccgctggctttggccgctccttggagaccgcgcggagactg
ctgctgctgctggtcaccgtcctggtcctggttctgttcagaggagccgacggacagccg
tgcccgccccagtgctcctgcaccgggactacggtggactgtcacggtcaggggctccgc
agcgtgcccaggaacatccccagaaacacggagcgactggacctgaatgcaaacaacctc
actaaaatcaccaaagcggattttgcaggactgaggcatctgcgagtcttacagttaatg
gagaacaaaatcaccacaatcgaaagaggagctttccaggacctgaaagagctggagaga
ctgcgcctaaatcggaataatctggccgtgtttcctgagctgcttttcctgggaacgact
aagctctatagacttgacctgagtgaaaaccagattcagggggttcctaggaaagccttc
agaggagctgtggaaatcaaaaacctccagttggactacaaccacatcagctgcattgaa
gatggagctttcagagcattacgtgacctggaagtactaaccctgaacaacaacaacatc
agccgattgtctgtggccagcttcaaccacatgccaaagctcaggactttccgcctgcac
tccaataacctgcagtgtgactgccatgtggcctggctgtccgagtggctgcgacagcgc
ccccgcttgggtctctacacacaatgcatggccccgccacacctgaggggccacaatgtg
gcagaggtgcagaaaaaggagtttgtgtgtgcaggtcaccagtcatcatcatcatcttcc
tcctgcagtgtgttacagtgtccagagtcctgcacctgcagcaacaacattgtggactgc
agaggaaagggtctgacagaaatacctaccaacctgcctgaaaccatcactgagatacga
ctggagcagaacgctatcaaggtgatcccagctggggccttttctccttataagaagctg
cgcaggatagacttgagtaacaaccagatatctgaattggcctcggatgccttccaaggt
ctgcgctccctgaattctttggttttatacgggaacaagatcackgagatttccaaaggg
ctgtttgagggactgttttctctgcagctcttgttgctgaacgctaataagatagcgtgt
ttgcgcgtggacgcatttcaggaccttcataacctcaacctgctttccctgtatgacaac
aagctccaaaccatcgccaaggggacgttctcgtctctgagagccatacaaacacttcac
ttagcccagaacccatttatctgtgactgccacctgaagtggctggccgactacctgcag
gataatcccattgagacgagcggcgcccgctgcaccagcccccggcgcctcgccaacaaa
cgcatcggacaaatcaagagcaagaagttccgctgctcagctagagaacagtatttcatc
ccaggagtacatcatgttggctgtaccgaggattaccgcagcaagctcggaggcgattgc
ttcgccgacttggcctgccccgagaagtgtcgctgcgagggcacgacagtcgactgctcc
aaccagaaactcaccaaaatcccagatcacattcctcagtacacagccgaactgcgtttg
aacaacaatgaattcaccgtgctcgaggcgacagggatcttcaaaaagttacctcagctg
aggaagattaacctgagtaataatcgcatcagtgacatagaggaggggacgtttgaagga
gcctcaggggtcaatgagttgattctgacctccaacaaactggagaacgtgcaccaccat
atgttaaagggactcagcggcctccgcacacttatgcttcggagtaatcgcatcagctgt
gtgagtaacagcagcttcgttgggttgagttcagtccgtctcctctcactctacgacaac
cagatcacctccatgaaccctggagccttcgacacgctgcactccctgtccacactaaat
ctcctggccaatcccttcaactgtaactgtcacctggcctggctcggcgactggctgagg
aggaaacgtatcgttactggaaaccctcgctgccagaatccctatttcttgaaggagatt
cccatccaggatgtagctgtccaggattttgcctgtgaagatggtaataacgagaacagc
tgctctcctgtcctgaggtgtccagcagagtgttcctgtctggacacggtggtccgctgc
agcaacaagggtctcaccacgctacccaagggcctccctaaagagaccactgaactgtat
ttggacggtaaccacttcactcaggttcctgtggagctctccgattacaaacacctcacc
ctcattgatttgagtaacaaccagatcagcacgttgtccaatcacagcctcagtaacatg
tctgagctgcttaccctaatcctgagctacaaccgcctgcggtgcataccagtgagggcg
ttcgacgggctcaaatcgctccgtttgctatctctccatggaaatgacatatctctgata
ccagaaggagcttttaaagacttgtcgtcactttcccatctagctctgggggccaaccct
ctgcactgtgactgccacatgcagtggctctcagactgggtgaagagcggctacaaggag
cccggcattgcccgttgtgctgggcccggcgacatgactgacaaactgctcctcaccatg
ccctccaaaaagtttacctgcacagaagtcctcgggccttgtggttttctggtgacaggc
ccagtggatttgagcatccaggctaaatgtgacccctgtctgtccaacccctgcaacaat
gacggcacatgtgccaacgaccctgtgcactactaccgttgcacctgcccttatggattt
aagggacaaaactgtgaagaacctatacatgcctgcatcagtaacccatgtcayaatggc
ggaacgtgccatctgaaagaaggcgaagggagcaacttttggtgtgtgtgtccagagggc
tttgaaggtgatgcatgtgagatcaacattgacgactgtgaagacaatgactgtgagaac
aactctacctgcgttgatgggatcaataactacacatgcatgtgttcaccagaatacaca
gctgctaccaatgaggtggagagaggagagctgtgtgaagagaaactggacttttgtgcc
cctgagctgaacccgtgtcagcacgactcaaaatgcattttgacacctcagggatacaag
tgtgagtgcactcccggttatgtaggtgagcattgtgagctggactttgacgactgtgag
gaaaacaagtgtcagaacggaggtcactgcatcgacgctgtgaacggatacacctgcatc
tgtccggagggatacagtggcttgttctgcgagttcccccctccgatggtacttcctcgc
accagtccttgtgacaaccacgagtgcctcaacgaggctcagtgcattgtggtgggagck
gacccccagtgccagtgtccccacggctacgagggcgagcgctgcgaaacgctcgtcagc
gtcaacttcgtcaaccgagagtcgtacctgcagcttccctccagcctcctctcycctcag
accaacatcagtctgcagattgccacagatgaggacagcggcgtcttgctgtataaaggc
gacaacgatcacattgcaatggagctgtacaggggacgtctcagggtcagctacgacact
ggatcctacccgccttccgctatttacagcgtggagacggtgaacgatggcagcttccat
tctgtggagttggtggcatcagatcagactctgactctgtccatcgarggcggagcaccc
aaatccatcaactccatcagcaaacagtctacactcaatatagactctccactttacgtg
ggagggatgccagagagggtctccgggggtctttcggccctgcagctcagctctggaggc
cggaacggcaccagcttccacggctgcctccgtaacttctacatcaacgggaagctccaa
aacttgggagctggactggatcgaaaaggttcaggttctgggacttcgcagcgcagcagc
cagtggctgggtaacggcgtggagcctggctgccagccgtgtcagagaggcgtctgcgtc
cagggggactgccacccaacgggtcaccgtggcttcacgtgcacttgccgccttgggtgg
acgggcgctctttgtgaccagcaagttagcaatgcttgtgatggcaacaagtgtatccac
ggaacctgcatccccatcaactcgtactcgtactcgtgtcgctgtcagcccggttttgct
ggtgtgctgtgcgatgagcaggatccagctgcggctaaaccctgcagcctgtctcgctgc
aaacatggaaaatgtagagtttcaggcctgggccaagcttactgcgagtgtgacagtgga
tacacaggagaggcttgtgaccgagaggttgcctgtcgaggggaacgggtcagagatgtc
taccagagacagcaaggctacgcggcgtgccaaacccaggagaaggtctcccgtctagag
tgtcgaggcagctgcccygggggagcagaaggacagggcacctgctgcacccccctccgc
agcaaacgtaggaaatacaccttccagtgcaccgacggctcttcttttgtccaggaagtg
gaaaaagttgtcaagtgcggctgtacaaagtgttcttcataa
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integrated database retrieval system
