Austrofundulus limnaeus (annual killifish): 106520920
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Entry
106520920 CDS
T06063
Symbol
pds5a
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106520920 (pds5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106520920 (pds5a)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106520920 (pds5a)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
106520920 (pds5a)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
106520920 (pds5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Utp14
Cnd1
Motif
Other DBs
NCBI-GeneID:
106520920
NCBI-ProteinID:
XP_013868695
UniProt:
A0A2I4BLS7
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MEFPQQQKPAGDGKIVYPPGVKEITDKISNDEVVKRLKMVVKTYMDMDQDSEEEKQQYLG
LALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLE
DTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVISNNHNQKVQLHMI
DLMSSIIMEGDGVTQELLDTILINLIPALKNLNKQAYDLAKILLKRTVQTIETCIANFFN
QVLVMGKSSVSDLSEHVFDLIQELFAIDPMLLTSVMPQLEFKLKSNDGEERLAVVRLLAK
LFGAKDSELASQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLARDLTEYLKVR
SHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKK
YCLHHEAGKESALKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYMVPHSLETEEKMKCLY
YLYACLDANAVKALNEMWKCQNMLRGLVKELLDLHKLPVSEANSTAMFGKLMNIAKNLPD
AGKAQDFMKKFNQVLSEDEKLRVQLETLISPTCSCKQAEICVREITRKLTFPKQPTNPFL
EMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDDEEGVTPDTAIRSGLELLKVLSF
THPTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELPQIRSTLIPILHQKA
KRGTPHQAKQAVHCIHAIFNNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHIAMLAP
DQFASPMKSIVANFIVKDLLMNDRTVGNKNGKLWTTDEEVSPEVLAKVQAIKLLVRWLLG
MKNNQSKSANSTLRLLSAMLVSEGDLTEQKKINKSDMSRLRLAAGAAIMKLAQEPCYHEI
ITPEQFQLCGLVINDECYQVRQIFAQKLHLALVKLLLPLEYLAVFALCAKDPVKERRAHA
RQCLLKNISVRREYIKQNPLAQEKLVSLLPEYVVPYMIHLLAHDPDFTKPHEYEQLKDIK
ECLWFMLEVLMTKNENNSHAFLRKMAENIKQTKDAQCPEDVKANEKLYIVCDVALFVIAN
KSTACHLDCPKEPVLPSNFFLVQDKDFKNDKEYLMAEMRQMLLTGKPKPAPVLATVNKPL
TVLGRRIFKTTTASDTTSNTSTNSSPLISNINKNSSTTTESSESRAQENNENPVIKNVEE
KKDAPSQKAPSQKTPSQKAAPDAGTEASPVKRRGRPPKAPGASAAVEKEGTVAPAGGGAG
RGRKRAADASADAVNTKTSKQQQNDEGTKRQIDLQR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccgcagcagcagaaaccagcgggggacggaaagattgtataccctcctggt
gtgaaggaaatcacggacaagatcagcaacgatgaggtggtcaaacgactgaagatggtg
gtgaagacctacatggacatggatcaggactccgaagaagagaagcagcagtatcttggg
ctggcacttcatctcgcctcagagttttttttaaggaaccccaataaagacgtgcgactg
ctggtggcctgctgtctggctgacatctttaggatttatgctcctgaggccccgtacacc
tcccacgataaactaaaggaaatcttcctgttcatcaccagacagttaaaaggattagaa
gacacaaagagcccccagttcaatcgatacttctacctgctggagaaccttgcatgggtg
aaatcatacaatatctgctttgagctggaggactgcaacgagatctttatccagctcttc
aaaacgctcttctctgttatcagcaacaaccataaccagaaggtgcagttgcacatgatc
gacctgatgagttccatcatcatggagggagacggagtcacacaagagctgctggacacc
atcctcattaacctcatacctgcgctcaagaatctgaacaagcaagcttacgatctcgcc
aagatcctcctgaagcggacggtccagaccattgagacctgcatcgcaaatttttttaat
caggttttagtgatgggaaagtcgtctgtcagtgacctctcagagcacgtctttgacctc
atccaggagctgtttgccatcgaccccatgctgctcacctcagtcatgcctcagctggag
tttaaacttaagagcaacgacggtgaggagcgtctggctgttgtacggttgttagcaaaa
ttatttggggccaaagactcggagctggcctcacagaacagaccactgtggcagtgtttc
ttaggacgttttaacgacattcacgtaccagtcaggctagaatgtgtaaagtttgcaagc
cactgcctcatgaaccaccctgacctggcacgggacctgacagagtatttgaaagtgcgt
tcccacgacccggaggaagccattcgtcatgatgtgatcgtcaccatcatcaacgctgga
aagaaggacctgaacttggtcaacgaccagttgctgggttttgtgcgggaacggacactt
gacaagaggtggcgtgttcgtaaagaggccatgatgggcctggctcagctttacaagaag
tactgtttgcaccacgaggcaggaaaggagtcggccctgaagatcagctggatcaaagac
aaactgctgcacatctactatcagaacagcatcgacgacaagttattagtagagaagatt
tttgcccagtacatggtccctcacagtcttgaaacggaggagaagatgaaatgcctctac
tacctgtatgcctgcctcgacgcaaatgctgtcaaggcgctgaatgagatgtggaagtgt
cagaacatgctccgaggtctcgtcaaagagctgctcgatcttcacaagctgccagtgtct
gaggccaacagcactgcaatgtttgggaagcttatgaatattgccaagaacctgccggat
gctgggaaggcccaggacttcatgaagaaattcaaccaggttctcagtgaggacgagaag
ctccgagtccagctggagacgctcatcagtccaacctgctcctgcaaacaggctgagatc
tgcgtgagggagatcactcggaagttgacattcccaaagcagcccaccaacccgttcctg
gagatggtcaagttcctgctggagcggatcgctccggttcacatcgactctgaggccatc
agtgctttggtaaaactgctaaataagtccattgagggaacagctgatgatgatgaggaa
ggtgtcacccctgacacggcaattcgctctgggctggagctgctcaaggtcctgtcattc
acacatcccacagcatttcactcagccgagacctacgagtccctgctccagtgtctgaag
atggaggatgacaaggtggcagaggctgccatccagattttcagaaacaccggtcagaag
attgagacggagttaccacagatacgatcgactctgattcccatcctgcatcagaaagcc
aagcggggaacacctcaccaggccaagcaggctgtccactgtattcatgccattttcaac
aacaaggaagtgcagctggcacagatttttgagccgctgtcacgcagtctgaacgcagac
gtcccggagcagctcatcacgccgctcgtctccctgggccacatagccatgctggctccg
gatcagttcgcctcgcccatgaaatccatcgtggctaacttcatcgtgaaagacttgctc
atgaatgacaggacagtggggaacaaaaacggaaagctgtggaccacagatgaggaagtg
tctcctgaggttttagcaaaggttcaggccatcaagcttttagtgcgctggttactagga
atgaagaacaaccaatccaaatcggcaaactccaccctacgtctgctgtccgccatgctc
gtgagcgagggggacctcaccgagcagaagaaaatcaataaatcagacatgtctcgtctg
aggctggcagctggagcagccatcatgaagctggcacaagaaccgtgttatcacgaaatc
atcacacctgaacagtttcagctctgcggcctcgttataaatgatgagtgctatcaggtc
cgacagatctttgcacagaagttgcacttagctctcgtcaaactgctgctgcccctggag
tacttggctgttttcgctctgtgcgccaaggacccggtgaaggagcgccgtgcccatgcc
cgacagtgcctcctcaagaacatctctgtccgcagagagtacatcaaacagaaccccctc
gctcaggaaaaactcgtctctctccttcccgagtacgtggttccctacatgatccacctg
ctggctcacgacccagacttcacaaaaccacacgagtacgagcagctcaaagacatcaag
gagtgcctgtggtttatgttagaagttctgatgaccaagaatgagaacaacagtcacgct
tttctccgaaagatggcagagaacatcaagcagacaaaggacgctcagtgtcctgaagac
gtgaaggccaatgagaaactgtacatcgtctgtgacgtcgctctcttcgtcatcgccaac
aagagcacagcgtgtcacctggactgtccgaaggagcccgttcttccctcaaatttcttt
ctcgtacaggacaaggactttaaaaatgataaggagtacctgatggcagagatgagacaa
atgctgctcactgggaagcctaaaccagcgccggtgttggcaactgtcaacaaacctctg
acggtactggggaggaggatcttcaagaccaccacagcttcagacacaaccagtaacacc
agcactaactcgtctccactgatctcaaacatcaacaagaacagcagtactaccacggag
tcatcggagagtcgagcgcaggaaaacaacgagaacccggtcatcaagaacgtggaggag
aagaaggacgcgcccagtcagaaagcgcccagtcagaaaacgcccagtcagaaagcagct
cccgacgccgggacagaagcgtcgccggtcaaacgacggggccgccctcctaaagccccc
ggtgcttctgcggcagtggaaaaagaaggaacggtggcaccggctggcggcggagctggg
aggggcaggaagagggcagctgacgcatccgcagacgcagtcaacaccaagacatcaaaa
cagcagcagaacgatgaagggacaaagagacagattgatctgcagaggtaa
DBGET
integrated database retrieval system
