Austrofundulus limnaeus (annual killifish): 106520930
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Entry
106520930 CDS
T06063
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106520930 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106520930 (zcchc7)
03016 Transfer RNA biogenesis [BR:
alim03016
]
106520930 (zcchc7)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
106520930 (zcchc7)
Transfer RNA biogenesis [BR:
alim03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
106520930 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
106520930
NCBI-ProteinID:
XP_013868716
UniProt:
A0A2I4BLU7
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MYSADHIREELEDELYQDGDSEGSEVNSEMEFHLYSQLHYSSNAAEMEEQGDDEEKENDR
LGLDNQQHEMLGTTGSGDSNLPLKNDNKLSSSNDDSLQPTKKKKKVKKQKIKKKTDSKDQ
RLSSLCCEEVIVIDSSPDCISISDESSDDDDGVCSLKGQGSHKLLTSTPAQQEIQKRKRS
SDVPVTVVSCSSADSESTLESDSSDSDGLENWMLLGQGMQDGDQSISLNLEGGSVSSADF
EGGGTWLVSEKDKEAQIYNKGNGPRITVQRVSNRYYTNKNVHCRNCNKTGHISKNCSESN
KLLPCYLCGTAGHAASECPNKHCRNCGQPGHCFDSCREKAYWYKQCHRCSIKGHFIDACP
EIWRQYHITVSIFSLSQLCQALLRSHSP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtatagtgccgaccacatccgcgaagagttggaggatgagctctatcaggatggagac
tcggaagggtcagaggtcaacagtgaaatggagtttcacctctacagccagctccactac
tcctccaatgctgcagagatggaggagcagggggatgatgaagagaaggagaatgaccgt
ttgggtctggataaccagcaacatgagatgctaggaacgactggaagtggtgacagtaat
ctgcctttaaaaaatgacaataagctttcatcatctaatgatgacagcctccagccaacc
aaaaagaagaagaaagtcaagaaacagaagattaagaagaaaactgactccaaagatcag
agattatcctcactgtgttgtgaagaggttattgtgatcgattccagccctgattgcatc
tccatctctgatgagtcctctgatgatgatgatggggtctgttcactcaagggtcaaggc
tcacacaagctgctgacttcaacaccggcacaacaggaaatacaaaagagaaaaagaagc
tccgatgtgccagtgaccgtggtttcctgcagctcagctgattcagaatccacattagag
tcggactcatcagattcagacggtctagaaaactggatgctgctcggtcaggggatgcag
gatggagaccagtccatctcactcaacctggaaggaggttctgtcagcagcgcagatttt
gaaggaggaggaacctggttggtttcagaaaaagacaaggaggctcagatctataacaaa
ggcaatggtcccaggataacggtacaacgggtgtcgaacagatattatactaacaagaac
gtccactgtagaaactgcaacaagaccggacatatctccaagaactgctctgaatccaat
aagttgttgccctgttacctctgtggtacagcaggccatgcagccagtgagtgtcccaat
aaacactgccgcaactgtggccagcccggacactgctttgattcctgccgtgagaaggcc
tattggtacaaacagtgccatcgctgcagcataaagggacacttcattgatgcttgtcca
gagatctggagacagtatcacattacagtgagtatcttttcattaagtcaactctgtcaa
gccctgctgcgctcacattcaccttaa
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