Austrofundulus limnaeus (annual killifish): 106520946
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Entry
106520946 CDS
T06063
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alim03036
]
106520946 (msh4)
Chromosome and associated proteins [BR:
alim03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106520946 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
AAA_29
ATPase_2
Motif
Other DBs
NCBI-GeneID:
106520946
NCBI-ProteinID:
XP_013868742
UniProt:
A0A2I4BLW9
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MYHSSTDEVTTSGDVVRESGQKRSLSSSRGLDESTASSGSNCLSSALSRQSSDGSSSKLS
HDGPSLPGMNSGQCHNSSRIGMTPSSVLMSTSDSSSLLCNRETPRFRRTPGSAGATGTSS
SSGSITSGASVIVAVVEGRGLARGEIGMASFNLKSPELVLSQFADAGTYAKVITKIHILM
PVEILMPDTASEKGKGTKLYKLITENFPCVTFTAIQRKYFNEKKGLEYIQQLCAPEFNTV
LMEVQAKYYCLASAAALLKYLEFLQNSVYASKSLKVSFKGSEQTAMIDSASATNLELVVN
NRDHRSEHTLLGVLNHTKTPGGARRLRSNILEPLVDVDTINMRLDAIQELLLKEELFFGL
KNAVSHFLDIDRLLSVLVQIPKQETVQVAEAKITHVIQLKHTLDLVPQLRAVLKDCSTAL
LKAYSTTLEDNRFDMILNQIKTVINCDTTYLKGSLNMRTQKCYAVRPNINEFLDIARRAY
TEIVDDIAGLVNQLGEKYGLPMRTSFSTARGFFIQMKLEGVVXPEDKLPAEFIKVTKHKN
NYGFTTAGLMKMNGRCDEALREIFHMSYIVMCQLLSTIHEHIHCLYKLSDAVSMLDMLLS
LANACTISDYVRPEFTDTLAIKQGRHPMLERMARQQPVSNNTYISEGSNFVIITGPNMSG
KSTYLKQVALCQVMAQIGSFVPAEYASFRVADQIFTRIGVDDDFETNSSTFMLEMKEISY
IIHNASDKSLIIIDELGRGTSAEEGIGICHSVCEVLLRLKAFTLFATHFLELCQLESLYP
NVENQHMEVQHTRSGDTGAEQVVYTYLLSRGCSEERHYGLKAAAMTALPLSVIQEAEIFA
SRVSQQLLAKHQTDPETQRQRAVYRLATRLQQTARNSRLDPESLRMYLKGLRRQYEAELE
AAGPTESLNTEE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacagcagcactgatgaggtaacaacgagcggggacgtcgtccgtgaaagtgga
caaaaacggagtttgtccagcagcagaggactggacgaaagcaccgcttcctcgggttcc
aactgcctttcttctgctctgtcacggcaaagctcagatgggagcagctccaaattaagc
catgatggtccatcactaccaggaatgaactcaggtcagtgtcacaacagctccaggatt
gggatgacgccatcatcagtcctcatgtccacctcagacagctcctctcttctctgcaac
agagaaacaccaagattcagaagaactccagggtctgccggggccacaggaacaagtagc
tcctctgggtccataacctctggtgcctcagtgatcgtagcggtggttgaaggacgtggt
ttggcgagaggagagataggcatggccagtttcaatctgaaaagtccagagcttgtactt
tctcagtttgcagatgcaggaacatatgccaaggttataaccaagattcacatcttgatg
ccagtggaaatactgatgccagacacagccagcgagaaggggaaaggaactaaactgtac
aagctgatcactgagaacttcccatgcgtaacttttactgcaatccaacggaagtacttt
aatgagaagaagggactggagtacattcagcagctttgtgctccggagtttaacactgtc
ctcatggaagtgcaagcaaagtactattgcctagcatccgcagctgctttgctgaaatac
ctagaatttctacagaactctgtttatgcttctaagtcacttaaagtgagctttaaaggg
agtgagcagacagctatgattgactcggcatctgccactaacttggagttggtggttaat
aacagagatcacaggagtgagcatactcttttaggggtactcaatcacacgaaaactccc
ggcggagccaggagactgcgctctaatattctggagcctctggtggacgtggacaccatc
aacatgcgcttggatgccattcaagagctgctgctaaaggaggagcttttctttgggctg
aaaaatgctgtaagtcatttccttgacattgaccggctgctttctgttcttgtccaaatt
ccaaagcaggaaacggttcaagttgctgaagctaagattacgcatgtcattcagctgaag
cacacgctggatctggtgccacagttaagggcggtgctgaaggactgcagcacagctcta
ctgaaggcrtacagcaccacactggaagacaacagatttgacatgatcctcaaccagatc
aagacagtgatcaactgtgacaccacatatctgaaaggcagcctgaacatgcgcacccag
aagtgttacgccgtgcggcccaacatcaacgagttcctcgacatcgcccgcagagcttac
accgagatagttgacgacatcgcagggctcgtgaaccagctgggggagaaatatggcttg
ccgatgcgcactagcttcagtacggctcgaggtttcttcatccagatgaagctagaaggt
gtcgtttktcctgaggacaaactccctgcagagttcatcaaggttaccaagcacaagaac
aactatggcttcaccactgcaggcttgatgaagatgaatggacgctgtgatgaagccctg
agggagatttttcacatgtcttacattgtgatgtgtcaactgcttagcaccatccatgag
cacattcactgcctctataaactctctgatgctgtgtccatgttggacatgttgctgtca
ctggctaatgcatgcacaatctcagattatgtgcggcctgagttcacagacactctggcc
atcaaacaaggtcgtcacccaatgctggagcgaatggctcggcagcagcctgtgtcaaac
aatacctacatctcagagggcagcaactttgtcatcataacyggtcccaacatgagtggc
aaatccacctacctcaaacaggtggcgctgtgtcaggtcatggctcaaatagggtccttt
gtcccggctgaatatgcctcctttcgtgttgctgatcagattttcaccagaattggtgtg
gatgatgattttgaaaccaactcctccactttcatgttagaaatgaaagagatctcttac
ataatccacaatgcgagtgacaagtccttgatcatcattgatgagttggggcgtggcacg
agtgctgaggagggcatcggcatctgtcactcagtctgcgaggtcctccttcgccttaag
gcgttcactctgtttgccacacactttctggagctgtgtcagctggagtccctctaccct
aatgtggagaaccagcacatggaggttcagcacacgcgcagtggtgacactggtgcagaa
caagtggtgtacacgtatctgctgagtcgaggatgctctgaagaaaggcactatggtttg
aaagcagcagcaatgaccgcacttcctctgagtgtaattcaagaggctgagatttttgcc
tctcgagtcagccagcagcttttggccaaacatcagactgatccagaaactcagagacag
agagctgtgtaccgcctggccactcgcctccaacagactgccagaaactcgagacttgac
cccgaaagcctgcgtatgtatctgaagggactgaggaggcaatatgaggctgagctggag
gctgcagggcccacagagagcttaaacacagaggaataa
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