Austrofundulus limnaeus (annual killifish): 106520994
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Entry
106520994 CDS
T06063
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
106520994 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alim01002
]
106520994 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
alim00536
]
106520994 (shh)
Peptidases and inhibitors [BR:
alim01002
]
Cysteine peptidases
Family C46: hedgehog family
106520994 (shh)
Glycosaminoglycan binding proteins [BR:
alim00536
]
Heparan sulfate / Heparin
Morphogens
106520994 (shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
DUF7764
Hom_end_hint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
106520994
NCBI-ProteinID:
XP_013868803
UniProt:
A0A2I4BM51
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MLLWTRIALAGLICLSLVSFGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEEKTGADRMMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPASSTVSLQDGTKKAVKDLQPGDRVLAADGRGNLLYTDFIM
FIDRDSTTRRVFYVIETVAGQKIALTAAHLIFTGNS
NT seq
830 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatagctttggccggtctcatctgcttgtccttggtgtccttt
gggatgggatgcggaccgggcagggggtacggcaggagaagacacccgaagaagctgaca
cctctcgcgtacaagcaattcatccccaacgtggcggagaaaaccctcggggcgagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaggagctgacgcccaattat
aacacagacatcatcttcaaggatgaggagaagaccggtgccgacaggatgatgactcag
agatgcaaagacaagctgaactctttggccatctcggtgatgaaccagtggcccggggtg
aagctccgggtcaccgagggctgggacgaggacggacaccacttcgaggagtcccttcac
tacgagggcagggcagtggacatcaccacctcagacagggacaagagcaaatatggaacg
ctgtccaggctggcggtggaggccgggttcgactgggtctactatgagtccaaagcgcac
atccactgctctgtgaaagcagaaaactcggtggcagcgaaatcaggcggctgcttcccg
gcgtcctccaccgtctccctccaggatggcaccaagaaggcggtgaaggacctccagccc
ggggaccgggtgctggcggcggacggccgcgggaacctgctctacacagacttcatcatg
ttcatcgaccgggactcgaccaccaggagggtcttctacgtcattgagaccgtcgcgggc
caaaagatcgccctgaccgccgcgcacctcatcttcaccggcaactccat
DBGET
integrated database retrieval system
