Austrofundulus limnaeus (annual killifish): 106521055
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Entry
106521055 CDS
T06063
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alim01002
]
106521055 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106521055 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106521055 (usp5)
Enzymes [BR:
alim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106521055 (usp5)
Peptidases and inhibitors [BR:
alim01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106521055 (usp5)
Ubiquitin system [BR:
alim04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106521055 (usp5)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106521055 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
106521055
NCBI-ProteinID:
XP_013868905
UniProt:
A0A2I4BMD3
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MADVGDVLMSVLSTIRVPKPGDRVHKDECALSFSSPESEGGLYMCMNSFLGFGSQYVDRH
HARTGQRAYLHITRTRKAKKEDDNNSGSGHPPKKKPTRLAIGIEGGFDVDQEQYEEDIKV
VILPDRQEVTSEDLATMPDVVRERVSLSMAGIMAADSVSHALQVQQWDGEVRQESKHAAD
LKQLDNGLKIPPSGWRCEVCDLQENLWMNLTDGKVLCGRRYFDGSGGNNHALLHYQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHFGIDMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLKPLFGPGLTGMRNLGNSCYLNSVMQVLFTVPDFQSKYVSYFDKIV
DEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGDENGASEPRGDQIGIAPRMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGANPSEAFRFLVEEKIVCQQSQKAKYTQR
VDYIVQLPVPMDHATNTEELQEAERRREEGDSSAPTVRAQIPFSACMAALSEPEILTDFW
SSAVQAKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSALRATG
QQPGEELLPEVAPPPLMTPDVEVKGILGSHGNDEDDSLYSPLLSPVLDDSTVSQLCEMGF
PLEACRKAVYYTGNTGIDAAMNWTMSHMDDPDFSAPLVLPGSSTGPGTTPTESLSEEHLA
TIVSMGFSRDQATKALRATSNVLDRAVDWIFSHLDDLESMDVSEGGRSAAESEGGRDPPP
GPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGYL
YFYRRVSE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttggtgatgttttgatgtcggttttgtccacaattcgtgttccaaagccg
ggagaccgtgtccacaaagatgaatgcgccctgtcattttcctcgccggagagtgaagga
ggcctgtatatgtgcatgaacagtttcctgggttttggcagtcagtacgtggacagacac
catgctcggaccggtcagagagcttatttgcacatcacccggactcgtaaggccaagaag
gaagatgacaataactctggctctggacacccacctaagaaaaagcccactagactggcc
atagggattgaaggaggctttgatgttgatcaggagcaatatgaggaggacataaaggtg
gtcattttaccagacagacaggaggtgacttcagaggaccttgccacaatgcctgatgtt
gtgagagagcgggtgtctctgtcaatggcgggtatcatggcagccgactcagtgtctcac
gccttacaagttcagcagtgggatggagaggtgagacaggagtcgaagcatgcagctgac
ctgaaacaacttgacaacggactcaagatccctcccagtggctggcgttgtgaagtgtgt
gaccttcaggagaatctttggatgaacctgacggatggtaaagtgctttgtggtcgccgg
tattttgatggctcggggggcaacaaccacgctcttctccactaccaggagacgggatac
ccgctcgctgtcaaacttggaaccatcactcctgacggcgctgatgtgtattcctatgat
gaggatgacatggtgctggattctaagttaccagagcacttatctcactttggcatcgac
atgatgaccatggagaagactgagcggacaatgacagagttggagatcgctgtaaaccag
cgtgtaggggagtgggaggtgatccaggagtctggtaccaccctgaagcccctgtttggg
cccggtctgaccggcatgaggaacctgggaaacagctgctacctcaattctgtcatgcaa
gtgctcttcaccgttccagacttccagagcaaatacgtgtcatattttgacaagattgtt
gatgaagcaccaagtgacccaacccaggacttcaaaactcaagtagctaaactgggttat
gggctgttgtcaggagagtattccaaaccagcaccagaccctggagatgaaaacggtgca
tctgaacctagaggtgaccaaatcggaatagcgcctcgaatgtttaaagctctcgtcgga
cgaggccacccagagttctccaccaatcgacagcaggatgcccaggagtttttattgcac
ttcataaacatggtggagagaaactgtcgctctggggccaatccatcagaagcattcagg
tttctggtggaggagaagatagtttgccagcagtcacaaaaagccaagtacacacagcgg
gtggattacattgtgcagctgcctgtgcccatggaccatgctactaacacagaagagctt
caggaagcggagcgccgccgcgaggagggggactcatcagcaccaacagtgcgtgcacaa
atccccttctcagcctgcatggcagctctcagtgaaccggagatcctcacagacttctgg
agttcagccgttcaagcaaagactactgctaccaaaacaacccgctttgcctctttcccc
gaccacctggtcatccagattaaaaagtttacttttggcctcgactgggtgccgaagaaa
ctggatgtgagcatcgacgttccggatactctggacctgagcgcgctgcgtgccaccggt
cagcagccaggggaggagcttctacctgaggtggccccgcccccactcatgaccccagat
gtggaggttaaaggtatcctgggttcccatggcaacgacgaggacgactcgctgtactcc
ccactgctgtctcctgttctcgatgactccactgtgtcccagctgtgtgaaatgggattc
ccactggaggcctgcaggaaagccgtgtattacactggaaacactggaatcgacgctgcc
atgaactggaccatgagccacatggacgatccagacttttcagctccactggtgctgcca
ggcagcagcactggacctggaaccactcccacagagagcctgtccgaggaacacctggcg
accatcgtgtccatgggcttcagccgagatcaggcaaccaaagcactccgagcaacgagt
aacgttctggaccgcgcggtggactggatcttctctcacctggacgacctggagtccatg
gacgtgtctgaaggcggccgctctgctgcggagagcgagggaggcagggatcctccgcct
ggacctcgcgtcagagacggaccaggaaagtacgagttgtttgcattcatcagtcacatg
ggaacgagcaccatgtgtggccactacgtttgtcacatcaagaaggaccagcagtgggtc
atcttcaatgatcagaaggtctgcgcttcagagaaacctcccaaagatctgggttatctt
tacttctatcgcagagtgtctgaatga
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integrated database retrieval system
