Austrofundulus limnaeus (annual killifish): 106521066
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Entry
106521066 CDS
T06063
Symbol
itgb1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03271
Virion - Rotavirus
alim04145
Phagosome
alim04510
Focal adhesion
alim04512
ECM-receptor interaction
alim04514
Cell adhesion molecules
alim04530
Tight junction
alim04810
Regulation of actin cytoskeleton
alim04820
Cytoskeleton in muscle cells
alim05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
106521066 (itgb1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106521066 (itgb1)
04514 Cell adhesion molecules
106521066 (itgb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106521066 (itgb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
106521066 (itgb1)
04530 Tight junction
106521066 (itgb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
106521066 (itgb1)
04810 Regulation of actin cytoskeleton
106521066 (itgb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
106521066 (itgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106521066 (itgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106521066 (itgb1)
04515 Cell adhesion molecules [BR:
alim04515
]
106521066 (itgb1)
04090 CD molecules [BR:
alim04090
]
106521066 (itgb1)
Membrane trafficking [BR:
alim04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
106521066 (itgb1)
Exosome [BR:
alim04147
]
Exosomal proteins
Proteins found in most exosomes
106521066 (itgb1)
Cell adhesion molecules [BR:
alim04515
]
Integrins
Integrin beta subunits
106521066 (itgb1)
CD molecules [BR:
alim04090
]
Proteins
106521066 (itgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
106521066
NCBI-ProteinID:
XP_013868926
UniProt:
A0A2I4BMF2
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MDLKLIFIAVLGLFCCCTAQKEGKECISANAKHCGDCIQHGAKCGWCTDLNFLKQGETVS
SRCDELQSLIKRGCAESLIENPRGKKHILTNKPVTNRNKREKKLKPEDITQVQPQKLSLT
LRSGEPQSFNLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMVEMSKITSDFRI
GFGSFVEKTVMPYISTTQAKLLNPCTGDQTCTSPFSYKNVLKLNSNGSLFNTLVGQQHIS
GNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCH
LENNTYTMSHYYDYPSIAHLVQKLSDNNIQTIFAVTEEFQPIYQELKNLIPKSAVGTLSA
NSSNVINLIIDAYNSLSSEVILENSKLPDDVTISYKAHCKNGVVNEGEAGRKCSNISIGD
EVTFNITITSKGCPKLGKQETIKIKPLGFTEEVEIILKFICECDCHKTGIKNSDLCHFGN
GTFECGACRCNEGRVGRNCECSSNDVATEDMDRNCRNGTDICSNNGECVCGMCECKKREN
PDERYSGEFCECDNFNCDRSGNKLCGGHGRCECRVCVCEPMWSGSACDCSLDNRTCLAKN
KQLCNGRGVCECGSCKCNDPKFQGSTCEECPTCPAVCTEHKECVECRAFGTGEKKETCEK
ECSDFKLIKVKTRDKMPQPNDASYPVMHCKERDANDCWFYYTYAVNNNTEKVVHVVEEPE
CPTGPDIVPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPI
YKSPINQFQNPSYGRKGAGL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaagctgatttttatagcagtgttggggctcttctgttgctgcactgctcag
aaagaggggaaagagtgcatcagtgccaatgccaaacactgtggggattgcatccagcat
ggagccaaatgtggctggtgtacagacctaaacttcctaaaacagggtgagacggtgtcg
agtcgttgtgacgagctgcagtctctgataaaacggggctgtgcggagtcactaattgaa
aacccacgcgggaaaaaacacatccttacgaacaaaccggtcacaaatcgcaataaaaga
gaaaaaaaactcaagccagaggatattactcaggtccagccccagaaactgagcctcact
cttcgatctggtgagcctcagtcttttaacctgaagttcaaacgggcagaagattatccc
attgacctgtactatttaatggacctgtcctactccatgaaggatgatttggagaatgtt
aagaacctgggaactagtctgatggtggagatgtcaaagatcacctctgatttcaggata
ggttttgggtcttttgtggagaagacggtcatgccttacatcagcaccacccaggccaag
ttactgaacccatgcacaggcgaccagacctgcaccagccccttcagctacaagaacgtg
ttaaagctgaacagtaatggctcattgtttaacactttggtgggccagcagcacatttct
ggaaacctggactctcccgargggggctttgatgccatcatgcaagtggctgtttgcggg
gagcagattggctggaggaacgtgactcgtctgcttgtgttctccactgacgccggcttc
cacttcgctggagatggcaaactgggtggcattgtactgcccaacgatggaaaatgtcac
ttggagaacaatacttacacaatgagtcactattatgactacccatccattgctcacctt
gttcagaagctgagtgacaacaacattcagactatctttgcagtcacagaagagtttcag
cctatttaccaggagctgaagaatttaataccaaagtcagctgtgggaactctgtcagcc
aactcgagcaatgtcatcaacctyattatagatgcttacaactctctctcgtccgaggtg
attctggagaacagcaagcttccagacgacgtgactatatcatacaaggcgcactgtaag
aacggggtggttaatgagggtgaagctggaaggaagtgctccaatatctctattggagat
gaggtcacatttaacatcaccatcacatccaagggttgtccaaaactgggcaagcaggag
accattaagataaagcctttgggtttcacagaggaggtggagataattctcaaattcatc
tgtgagtgtgactgccacaagactggcatcaagaacagtgacttgtgccactttggtaat
ggtacctttgagtgtggagcctgcaggtgtaatgagggccgagtgggcagaaactgtgaa
tgcagcagcaatgacgtggccacagaggacatggaccggaactgccgcaacggcacagac
atctgtagcaacaayggggagtgcgtctgcggcatgtgtgagtgcaagaagcgagagaac
ccagacgagaggtacagcggcgagttctgcgagtgtgacaacttcaactgcgaccgctct
ggaaacaagctttgtggaggtcacggacgctgtgagtgccgagtgtgcgtctgtgaaccc
atgtggtctggaagtgcctgtgactgttctctggacaacagaacgtgtttggccaagaac
aagcagctctgtaacggcagaggagtgtgtgaatgtggcagctgcaagtgcaatgacccc
aaattccagggctccacgtgcgaagagtgcccgacctgtccggcagtctgcacagagcac
aaagagtgcgttgagtgtcgagcgtttggcacgggtgaaaaaaaagagacgtgtgaaaaa
gaatgcagtgacttcaagctgattaaagtgaagaccagagacaagatgccgcagcccaac
gacgcctcctaccctgtcatgcactgcaaagagagggacgctaatgactgctggttctac
tacacgtacgccgtcaacaataacacggaaaaggtggtccatgtggtggaggagccggag
tgcccaactggtcctgacatagtccctatcgtggccggcgtggtcgccggaatcgtcctg
attggcttggccctgctgctcatctggaagctgctgatgatcatccacgacaggagggag
tttgccaagttcgagaaggagaagatgaacgccaagtgggatacgcaagaaaacccaatt
tacaagagtccaatcaatcagttccagaacccaagctatggacgtaaaggcgctggcctt
tga
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integrated database retrieval system
