Austrofundulus limnaeus (annual killifish): 106521142
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Entry
106521142 CDS
T06063
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
106521142 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106521142 (myo5c)
04131 Membrane trafficking [BR:
alim04131
]
106521142 (myo5c)
03029 Mitochondrial biogenesis [BR:
alim03029
]
106521142 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
alim04812
]
106521142 (myo5c)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
106521142 (myo5c)
mRNA cycle factors
P-body specific factors
106521142 (myo5c)
Membrane trafficking [BR:
alim04131
]
Others
Actin-binding proteins
Myosins
106521142 (myo5c)
Mitochondrial biogenesis [BR:
alim03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
106521142 (myo5c)
Cytoskeleton proteins [BR:
alim04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
106521142 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
AAA_16
NPHP3_N
Myosin_N
Motif
Other DBs
NCBI-GeneID:
106521142
NCBI-ProteinID:
XP_013869026
UniProt:
A0A2I4BMQ3
LinkDB
All DBs
Position
Unknown
AA seq
1741 aa
AA seq
DB search
MTLLELYTKYNRVWIPDADHVWKSAEITTDFHPGDDVLELLLEDATEYRFPVDPSQPRLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIVVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDKKYRIIGANMR
TYLLEKSRVVFQAENERNYHIFYQMCSCADSEEFKNLRLLSADKFRYTCMGGDIAIDGVV
DKKDMEETRRTFSLLGLKEDFQTDVFKVLAAILHLGNVEIRSVGDEKSSVPPSDPHLTVF
CELLGVKADELVRWLCHRRIVLVTETVVKPVPKERAVNSRDALAKQIYAHLFHCIIHRIN
TALQVPGKQHAFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLYNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDALYEELVNTMRASKFFFLGEFFQEKEPSTAN
SKGVKVKPARPPIKPANKQLRTSVGNKFCSSLALLMETLNATTPHYVRCIKPNEEKLPFE
YDSGRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHVEADLSDKKQTCKNV
LQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSRRRRYLRMR
EAAIILQQYIRGKRTIRKMVNAATLKQGWAALVIQRHWRGYRMRQVYQVVRLASVTIQAF
TRGWIARKRYKKMVEEHKALVLQKYARAWLARRRFQIMRRLVLNVQLSYRVQQLRKKIEE
QNKENLGLMERLTNLANSNSQTVDRLQSVEVQLERLTTQKASLEEKGRKAKEEASLTIAR
LQKEIEELRLEKQNLEKKFDACIKETKESFDQIKRNLLDEKENEARLRKIAENNAEILRQ
DHEAEVEALKQEVKRLKEDRVSLQRKVEEGAQVSADLQEQVVQLTKHVKVIPELRRDLNH
LQNQRNSLDRRMKEQSEQAADNIKKIIRQLVGDVVDEEKLLGLAPVDSEKIYEPDDLLAA
FEGLSEATRIVENHQKDVRERYETQVEGLMLKADHLQNENSKLQNLFQEKSNVNEDIRQE
VSRLSSENSIIPELKQQVSELQRQKQELEGVIKEQSRDIAEKNTEITNVLQRRITEESLQ
RSIFEEKANKLEEAKMELQGRIEELEEETDHLNRQQLLEGEVKRKLREETSRLTAENMDF
EEQLDQKDRLIKKLQSQIKCLEISQKAKNTVSTIPKEYLGMLEYKRDDESRLIQNTILDL
KPKGVVVSMIPTLPAYILFMCVRHADYLNDDAKLKSLMNGIIVAVKKVIMVHHKDSEFLS
FWLSNTYQLLNCLKQYSGEEDFLKQSTPRQKKNCLQNFDLSEHRQILSDLAIHVYHQLIR
LMQKTLAPAIVPGMLEHESLQGISSMKPTGFRKRSNSVYNDSESYTISSILQQLSAFHYT
MSHHGMEQSLIRQVVKQLFFLVGATTFNHIMLRKDMCSCRKGMQIRCNISYLEEWLKEKE
LQSSSAIETLRPLAQAAWLLQVNKSTDEDAKEIAEKCTELSPVQIVKILNSYTPIDDFEK
RVTSSFVRRVQSLLQDHEGSTQLMLDTDYRFQVTFPFCYSSTALELLQVPTSLHLDFLTR
I
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgactttattagaactttacacgaagtataacagagtgtggataccagatgcagatcac
gtgtggaaatcagctgaaattactacagatttccatcctggtgatgatgttcttgagcta
cttcttgaagatgccactgagtaccggttccctgttgacccatctcaaccacggctccct
cctctacgaaacccggacatcttggtgggtgagaatgacctcaccgctctcagctacctg
cacgagcctgcagtgctgcacaatctcaaagtgcgattcgttgaatccaggatcatctat
acctactgtggtattattctggtcgctgtaaatccctacaaacagcttcccatctacgga
gatgcaattattcatgcctactcgggtcagaacatgggggacatggaccctcatatattt
gcagtggcagaggaagcgtacaaacagatggccagaaatcataagaaccagtctatcgtt
gtgagcggagagtctggagccggtaaaacggtgtcggctcgatacgctatgaggtacttt
gctgttgtgagcaaatctggaagtaagactcgagtggaagacaaagtgttggcttctaac
ccaataacagaggccataggaaatgcaaaaacaactcgaaacgacaacagcagtcggttt
ggaaagtacacagagatcagctttgacaagaagtaccggatcattggagcaaacatgagg
acttacctgttagagaaatccagagttgtttttcaggcagagaacgagcgcaattatcac
attttttatcaaatgtgttcatgtgcagactccgaggagttcaagaacctgagactgttg
agtgcagataagttcagatacacttgtatgggtggggacatcgccatcgatggtgtagtc
gacaagaaggacatggaagaaactcgacggaccttctcactgctgggtttaaaagaggac
tttcagacagacgtttttaaagttttagcagcgattctgcatttgggaaacgtggagatc
cgaagcgtgggagatgagaaatcatcagttcctcccagcgatcctcacctgacagtcttc
tgtgagctgctgggtgtgaaagcagacgagttggtgcgttggctgtgccaccggcggatc
gttctggtgacggaaacggtggtgaagccggtgcccaaggagcgagcggtaaactccaga
gatgccctggcgaagcagatctatgcccacctgttccactgcatcatccacaggatcaac
acagcgctgcaggttcctggaaagcaacacgctttcattggtgttctggacatttacgga
tttgaaacgtttgacgtcaacagctttgaacagttttgcatcaactacgcaaatgaaaag
ctccagcagcagtttaacctgcatgttttcaagctggagcaggaggagtacatgaaggag
gacatcccttggacgctgatcgatttctacgacaaccagcctgtcatcgacctgattgaa
gcaaagatgggcatccttgatctgctcgatgaagagtgtttattccctcaaggaacagat
caaagctggctgcagaagctctacaactacctggatgccaatcctttgtttgagaagccc
aggttatcaaatgaggcttttgtgattcagcactttgcagacaaggtggagtatcagtgc
agaggtttccttgagaagaaccgagatgctctttatgaagaacttgtgaacacaatgaga
gccagtaagtttttttttctgggagagtttttccaagagaaggagccaagcactgcaaac
agtaagggtgtgaaagtgaagccggcaaggcctccgataaaaccggccaacaaacagctg
agaacctccgtaggaaacaagttctgcagctcgctcgctctgctgatggagacgttaaac
gccaccacccctcactacgtgcgctgcattaaacctaatgaggaaaagctgccgtttgag
tacgactcagggagagtggtgcagcagctgcgagcctgcggggtccttgaaactattcgt
atcagcgcccagagctacccttccaggtggacatacattgaattttacagccgatacagc
atcctgatgtctcatgtggaggcagacctcagtgacaagaaacaaacctgcaagaacgtg
ttgcagaggctgatccaggactccaaccagtacaaattcggccgaacaaagatcttcttc
cgagccggtcaggtagcttacctggagaagctgcgtctggatcgactccgaggagcctgt
gtgaccattcagaagcacgtccgtggatggagccgcaggaggcggtacctgaggatgagg
gaggcagccatcatccttcaacagtacatccgaggaaagaggacgatccgtaaaatggtg
aatgctgcgacgctgaagcagggctgggcggctctggtgatccaaagacactggagaggg
taccgcatgaggcaggtctaccaggtggtccgtctggcctccgtcaccatccaagccttc
acgcgaggctggatcgcccggaaacgctacaagaagatggtggaggaacacaaagctctg
gttctgcagaaatacgccagagcgtggctggcacgacgacgatttcaaatcatgcgtcgg
ctcgtgctcaacgtccagctttcctacagagttcaacagctccgaaagaagatcgaggag
cagaacaaagagaatctcggattgatggagcggctgacaaacttggccaactctaattct
caaactgtggacagacttcaaagtgtggaggtgcagctggaaagattaaccactcagaag
gcttctctggaggagaaagggaggaaagccaaagaagaggctagtctgaccattgctcgg
cttcagaaggaaatagaggagctccgccttgaaaaacagaacttggagaaaaagtttgac
gcttgtatcaaagagactaaagagagctttgatcaaataaaaaggaatctcctggatgag
aaagaaaatgaagcccggctcagaaagattgcagagaacaacgctgagatcctgagacag
gaccacgaggcggaggtggaggccctgaagcaggaggtaaagagactgaaggaggacagg
gtgagtctgcagaggaaggtggaggagggggcgcaggtgagcgccgacctgcaggaacag
gtggtccagctcaccaaacacgtcaaagtcattccagagctgcgcagggatctgaaccac
ctgcagaaccagaggaacagcctggaccgaaggatgaaggaacagtcggaacaagctgca
gataatattaagaagatcataaggcagcttgttggtgatgttgtggatgaggaaaaactt
ttggggctcgctcctgtcgactcggagaagatttacgaaccggatgacttgctggcagcc
ttcgagggcctgagcgaagccaccaggattgtggaaaaccaccagaaggacgtcagggag
agatacgagactcaagtggagggcttgatgttaaaagcggaccaccttcaaaatgagaac
agcaagctgcagaacctgttccaggagaaaagtaacgtcaacgaagatatccgccaggaa
gtgtcgcgactgagcagtgagaactctatcataccggagctgaaacagcaggtttctgag
ctgcagagacaaaaacaggagctggagggcgtcatcaaggagcagagcagagacatagca
gaaaaaaatacagagataacgaacgttcttcaaagaaggattacagaagaaagcttgcag
cgcagcatctttgaggagaaagccaacaagctggaggaggccaagatggagcttcaaggg
aggatcgaggagctggaagaggagacggatcacttgaataggcagcagctgctggagggt
gaagtcaagagaaaactgagagaggagacgtcccggttgactgcagagaacatggacttt
gaagagcagctcgaccagaaagacagactaataaagaaactgcagagtcaaataaaatgc
cttgaaatatcacagaaagctaaaaatacagtgtctaccattcccaaagaatacctcggc
atgttggagtacaaacgagacgatgaatccaggctcattcagaacaccatcctggatctg
aagcctaaaggtgtggtggtcagtatgattcccaccctgcctgcttacatcctgttcatg
tgcgtccgacacgctgattacctgaacgatgacgccaagctcaagtctcttatgaatggg
atcatcgtcgctgtcaaaaaggtcatcatggttcaccacaaagactctgagtttttgtcc
ttttggctctcgaacacatatcagctgctcaactgtctgaaacaatacagcggggaggaa
gatttcctgaagcagagcacccctcgccagaaaaagaactgccttcagaactttgatttg
tctgaacacagacagattctcagtgacctggccatacacgtctatcatcagctcattcgg
ctcatgcagaagactcttgcacctgctattgtgcctggtatgttggagcatgagagctta
caggggatctccagcatgaaaccgacgggcttcaggaagcgatccaacagtgtttataat
gactccgagagctacaccatatcctccatcctgcagcagctctccgccttccactacacc
atgagccaccacggcatggagcagagcctgatcagacaagtggtcaaacagctgttcttc
ctggtgggggccaccaccttcaaccacatcatgctccgcaaagatatgtgctcctgcagg
aaggggatgcagatcaggtgtaacatcagttatttagaagagtggctgaaagaaaaggaa
cttcagagctctagcgctatagaaactttgaggccgttggctcaggctgcctggctgctg
caagtcaacaagtccaccgacgaagacgccaaagagatcgctgagaaatgcaccgagctc
agtcctgtccagattgtcaagatcttgaattcctacacacccatagatgattttgagaaa
cgagtgacatcctcatttgtccgcagagttcagtcgttgcttcaagaccacgaagggtcc
acgcagctgatgttggacacagattatcgtttccaggtcacatttccgttctgctattcc
tcgacggctctggagttgctgcaggtcccaaccagtcttcatctggactttctaaccagg
atctga
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integrated database retrieval system
