Austrofundulus limnaeus (annual killifish): 106521177
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Entry
106521177 CDS
T06063
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03022
Basal transcription factors
alim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106521177 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
106521177 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106521177 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106521177 (gtf2h1)
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
106521177 (gtf2h1)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
106521177 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
106521177
NCBI-ProteinID:
XP_013869082
UniProt:
A0A2I4BMU9
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQKKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
AKIQLQLVLHTGESTTFHFANESTALKDREAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGMNNGEAAPYSNKQDVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGMQ
DIFSECAKQDEKGLKSLVNQGVKNPLVDLLSLEDKTLDEGYGIRTAVPSTSNASKTVKES
SNSAIIKRFNHHSAMVLAAGSRKGDVPTDQASETSSTDGNSRDSDFFQPPLKKVKLQEAI
EYEDLQRENKPKVVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVSYIQHEMANYKPNL
TQVLSSAVASSAIAALSPGGVLMQPVAPQAINQMVPTEIQGELKHLYVAAGELLRHFWSC
FPVNTPFLEEKVIKMKSNLERFQMTKLRPFQEKIQRQYLSTNLTGHLEDMLQAAYSKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgtcagaagaggtgctgctggtggtgaaaaaggttcgtcagaagaagcag
gatggcactctgtatctgatggctgagagaatagcctggggtccagagggcaaagaccgc
ttcacagtcagccacttgtatgcagatatccgctgtcagaagatcagtcctgatggcaaa
gccaaaattcagcttcaactggtccttcacaccggcgagagcaccacattccactttgcc
aatgagagcactgcactcaaagatcgagaggctgccaaagaactgctgcagcagctactg
ccaaagttcaagaagaaagccaacaaggaactggaggagaaaaacaggatgctccaagaa
gaccctgtgcttttccagctctacaaagacctggtggtgagccaagtgatcagtgcggag
gaattttgggccaaccgattaggaggcatgaacaacggagaagctgcaccttacagcaac
aagcaggacgttggtatatctggagcctttctggccgacattagacctcagaccgatggc
tgtaatggtttgagatataatctgacagctgatattattgagtccatttttagaacttat
cctgcagtgaagcagaagtatagtgaaaatgttcctcacaacctgacggagaaggagttc
tggacccgctttttccagtcgcattatttccacagagaccgcatcaacacggggatgcag
gatatcttctcagaatgtgccaagcaggatgagaaagggttaaagtctttggtgaaccaa
ggagtgaagaatcctttggttgaccttctgtcgttggaagataaaacattagatgagggt
tatggaattagaacagctgtaccctcaacctctaacgcaagcaagacggtaaaagaaagc
agcaactctgcgattataaaacggttcaaccatcacagtgccatggtgctggctgcaggc
tcacgcaagggggacgtgccaaccgaccaggccagtgagacgagcagcacagatggaaac
tcgagggattccgacttctttcagcctcctcttaagaaggttaaactacaagaagccatc
gagtatgaggatctacaaagggaaaacaaaccaaaagtggttgcattaaacctgaagaag
tctgacaggtacgctcatggtcccgtgcctcttcagtcccagcagtatacaaccagccag
gatatcatcaactctgtcagctacatacagcatgagatggccaactacaaacctaacctc
actcaggtgttgtccagcgcagtagctagttctgccatcgcagcgctctctccaggaggt
gtcctcatgcagcccgttgcaccgcaagccataaaccagatggtacccacagagattcaa
ggagagctgaaacatctgtatgttgctgcaggagaattattgaggcacttctggtcctgt
tttcctgtaaacacgccatttttagaggaaaaggtgataaaaatgaaatcaaacctcgag
agatttcagatgaccaagcttcgtccttttcaggaaaaaatccagcgacagtacttgagt
acaaaccttacaggacacttggaggacatgttgcaggctgcctatagcaagttccacatc
tggcaaactcgcaggatgatgaggaaaacttga
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