Austrofundulus limnaeus (annual killifish): 106521329
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Entry
106521329 CDS
T06063
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106521329 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106521329 (mid1)
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106521329 (mid1)
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106521329 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
TRIM_CC
zf-C3HC4
FN3_DSCAM-DSCAML_C
PRY
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
106521329
NCBI-ProteinID:
XP_013869313
UniProt:
A0A2I4BNL0
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILVSHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPLPAPHSGPNSPSEEGSNRL
ALVPISAAMSSPCTPPEPVQCQFCEQDPPQEAVKTCVTCEVSYCEECLKATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHEEEKVNMYCVSDDQLICSLCKLVGRHRDHQVAALSDRYEK
LKQALDSNLSNLIKRNNELESLMGRLIQTCQHVEVNASHQEGKLMEECDVLIDIIQQRKQ
IIGNKIKEGKAQRLRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKSINER
VSMATASTQVLIPEIHLTDTFDTFALDFTREKKLLENLDYLTAPSAPCIREELCTASYDT
ISVHWTSDDEFSVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHS
QDRFSSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVIC
RCNNSWVVRHNSKELAIEPSPHLRRIGILLDYDVGYLSFYDAVGSQHLHTFNVSFVQPVC
PVFNVWNKCLTILTGLPIPDHLEGQEPNN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggacactctggagtcagagctgacctgcccaatctgcctggagctctttgaagaccca
ctgctgctcccttgtgcccacagcctgtgcttcggttgcgcccatcgcatcctcgtctcc
cactgcgccaccaacgagtccgttcagagcatcggcgcctttcagtgccccacctgtagg
tatgtcatctccctgagtccagagcgtggactagaaggacttaagagaaacgtgaccttg
cagaacatcatcgacagagtccagcgagcctcgtcgtcagctgggcttcctttaccgctg
cctttgccggccccccacagtggacccaactctccctctgaggaagggagcaaccggctg
gctctggtccccatcagcgctgccatgtccagcccatgcaccccaccagaaccagtccag
tgccagttctgtgagcaggacccgcctcaagaggccgttaaaacatgcgtgacgtgtgag
gtgtcgtactgcgaggagtgcctcaaagccactcacccaaacaagaagccattcaccggt
cacaggctcatcgagcctatgcccgattcccacctcagggggctgcagtgcctggagcac
gaggaggagaaggtgaacatgtactgtgtgagtgatgaccagctgatctgctcgctgtgc
aagctggttggaaggcacagggatcatcaggtggcagccctgagcgaccgttatgagaaa
ctcaagcaagcccttgattccaacctgagtaatttaatcaagaggaacaacgagctggag
tctttaatgggcagattgatccagacttgtcaacatgtcgaggtgaatgcatcccaccag
gaggggaagctcatggaggagtgtgatgtcctgattgacatcattcagcagaggaagcag
atcatcggcaacaagattaaagaggggaaggctcaaaggcttcgtaagctggcccaacaa
atttccaactgcaagcagtgcatcgagaggtcctccgccctcatcacacaggctgatcag
acgctaaaagaaaccgatcacgctcgcttcctgcagacagccaagagcatcaacgagagg
gtttccatggcaactgcatcaacccaagtgctgattcctgagatacacctcactgacact
tttgacacmtttgcactggacttcaccagagaaaaaaaactgttggagaatctggattac
ctcacagctccaagtgctccgtgcattagggaagagttgtgcacggcttcatacgacacc
attagtgtccactggacgtctgatgatgaattctcagtcgtgtcctacgagctccagtat
gccatcttcacaggacagtccaacattgccagtttatgtaattcattggaaagttggatg
attgtacccaacatcaaacagaaccactacacggtacatggtttgcagagtggcaccaag
tatatctttgtcgtaaaggccatcaatcaagcgggaagccggagcagtgaaccagggact
ctaaagacaaacagtcagccatttaaactagaccccaaatcggctcataagaagctgaag
gtgtcacacgataacctcacggtggagcgggatgaaaccacatcgaagaaaggccacagc
caggatcggttctccagccagagcagctatggtgtggtgggaaatgtctatattgacagt
gggcgtcactactgggaggctttgataggaggaagcacatggtacgcagtaggtattgcc
tacaaatcagccccaaagcacgagtggattggcaagaactcagcctcttgggtgatctgc
cgctgcaacaactcttgggtggttcgccataacagcaaggagctagccattgagccgtct
ccccaccttcgtcgcattgggatcctgctcgattacgatgtcggatatctgtctttctac
gatgccgtgggctcacagcacctccacacatttaatgtgtcctttgttcagcctgtgtgt
cccgtgttcaatgtgtggaataagtgtctgacaattctcaccggtctacccatccctgac
catctagagggacaggagcccaacaattaa
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