Austrofundulus limnaeus (annual killifish): 106521485
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Entry
106521485 CDS
T06063
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
alim04121
]
106521485
Enzymes [BR:
alim01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106521485
Ubiquitin system [BR:
alim04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106521485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
106521485
NCBI-ProteinID:
XP_013869522
UniProt:
A0A2I4BP48
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MDPPRTRSRSRSGFYHFAVNGSVGGGGSAVGNGNMMSATGGGGGGGLNYPPQSNPGWAPH
HGGRNYPESQQPQQQQHGQVSYLSAGVQRHSAHGAHRHPGVGGVLHFHPDNVCSEDRDKL
EDSPSPKRQRLSQQSMLDLSSAPPSTPSSPIRPWELPPNRRPHPHYMPERCHTPVRNRRS
PPMRRQRGRRDRLTRHHHHYNSNNNNNNHHHHPPTGLHHPHPHHGPALGHQDENYRHPAP
PQGYPPFSQLPPRGLGSGPEERPGYHAPNPSPRPFNPPPNLSPRLLHPGSPHPQHPHPHP
PHQQSSGILDIQDPGSIPVSYPVSPPGAPPGLPPRSAPHQIPACSVVFSGQHYPICSVPP
PVIQTCSVQHLPMPYAFPSLLSSDPAFLIPPPHLAHPPTHLPHHPPHLPQPAQFGPYPAQ
QARSPLQRIENDVELLGEHLSLGAGLHYSPAAHPALTPHSTQLHFLSHDPLPQEFFGVSY
PNFIPRRLPGRRYRSQQLPPSPYHPSLLPYFLSMLPVQPTGPAISLELDVDDGEALLNLA
ERLGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFEPRQLLRVLPCSHEFHG
KCVDKWLRVSEHRLETLCPANQTFSVFTTNNSPFFRL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaccccccgaggactcggtcgcggtctcgctccggcttctatcacttcgcggtgaac
ggtagcgtcggaggcggcggcagcgctgtcggtaacgggaacatgatgagcgccaccggg
ggaggaggaggaggaggtctgaactaccctccgcagagtaaccccggctgggcgccgcac
cacggaggacggaactacccggagagccagcagccccagcagcagcagcacggccaggtc
agctacctgtccgctggggtgcagcggcactctgcacacggtgcacacagacaccccggg
gttggaggtgtgttgcattttcacccagataatgtgtgcagtgaggatcgggacaaactg
gaggacagccccagcccgaagcggcagcgcctttcccagcaatccatgttggatctaagc
tccgcccctccgtccactccttcctctcccatccgaccatgggagctgcctcctaatcgc
agaccacacccccactacatgccagagagatgccacacgcctgttagaaaccgccgcagc
cctccaatgagacgtcagcgtggccgacgagaccgcctgactcgccatcaccaccactac
aacagcaacaacaacaacaacaaccaccaccatcacccacccacaggtctccaccaccct
cacccccaccacggcccggccctgggccatcaggacgagaactaccgccacccagctcct
cctcagggttacccccccttcagccagctgcctcctcgggggctgggctccggtcccgaa
gagcgcccgggttaccacgccccaaatccctctccgaggccttttaacccgccyccgaac
ctatctcccaggcttctgcaccccgggtcccctcacccacagcacccgcacccccacccg
ccccatcagcagagcagtggcatcctggacattcaggatccgggttcaattccagtatcg
taccccgtctctcctccgggcgcgccgccgggcctgccccctcgctccgccccacatcag
atcccagcatgctcggtggttttcagcgggcagcattatcccatctgcagcgttcctcct
cctgttatccagacgtgttctgtccagcatttgcccatgccctacgcgttcccgtcattg
ctttccagtgacccggccttcttgattccccctccccacctcgcccatcctcccacgcac
ctccctcaccacccgcctcacctgccgcagcctgcacagtttggaccttacccagctcag
caggcgcgatcgcctttacagaggatagagaacgacgtcgagctgcttggagagcacttg
tctctgggtgctgggctccattattctcctgctgcacacccagccctcacccctcactcc
acacagctccacttcctctcccatgatcctctgcctcaggagttcttcggagtctcctat
ccaaacttcattcctcggcgtctcccggggcggcgttatcgttcacaacagcttccaccc
tcgccttaccaccccagcctcttgccttacttcctatcaatgctgccagtccagcccaca
ggtcctgctatcagcctggagctggacgtagacgatggagaggccctcctgaacctcgct
gagcgcctgggagaggccaaacttcgaggactgaccaagggagacatcgaacagcttcct
tcttatcgatttaatccaaataatcaccagtctgaacaaacactgtgcgtggtgtgtatg
agtgattttgagcctcgacaactgctgcgagtcctgccctgcagccacgagttccacggg
aagtgtgtcgacaagtggcttagggtgagtgagcaccgactagagacgctgtgtcctgcc
aatcagacattttctgtttttactacaaataattcacctttttttagactgtaa
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