Austrofundulus limnaeus (annual killifish): 106521690
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Entry
106521690 CDS
T06063
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106521690 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
alim01002
]
106521690 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
alim04131
]
106521690 (usp30)
04121 Ubiquitin system [BR:
alim04121
]
106521690 (usp30)
Enzymes [BR:
alim01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106521690 (usp30)
Peptidases and inhibitors [BR:
alim01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106521690 (usp30)
Membrane trafficking [BR:
alim04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
106521690 (usp30)
Ubiquitin system [BR:
alim04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106521690 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
CEND1
Motif
Other DBs
NCBI-GeneID:
106521690
NCBI-ProteinID:
XP_013869814
UniProt:
A0A2I4BQ22
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MLWCRPDSSDKLVGEFLGTGPTVRNKMIKNWGVIGGIAAAIAAGVYVMWGPITERKKRKR
GMVPGLLNLGNTCFLNSLLQGLAACPSFIRWLEKFSCLPTIQSCKDNQLSTTLLQLLRAL
SSDEPGDEDVLDAGCLLDILRLYRWHINSFEEQDAHELFHVLTSSLEEERNRQPKVTHLF
DVQSLENLSNQEDKTTTCISRAPLHPIPDPWKFQHPFHGRLTSNMSCKRCNIQSPVRYDS
FETLSLSIPLPQWGRPITLDQCLQHFISSETIKEVECENCTKLQQSTTLNGQVLESQRTT
FVKQLKLGKLPQCLCIHLQKLTWSSEGTPIKRQEHVQFAEFLSMDRYKHNSSTQNHRRIK
CAPKAPRAESLNDSTEMPKANGTDTENNNKPFSNGTCSSVFIHSPGLNSQLGVTYDFSXL
PSSSTEYLFQLVAVLVHHGDMHSGHFITYRRSPPRPHGSSAFSSQWLWVSDDSVRRSSLH
EVLSSNAYMLFYERVRRPSLSRDSELCEESRPGVSVFERCV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagaccagacagctccgataagcttgttggagagtttcttggcacagga
cctacagtcaggaacaagatgatcaaaaactggggagtgatcggagggatagcagcggcg
attgcagcaggagtttatgtcatgtggggcccaattacagagaggaagaagcggaagaga
gggatggttccaggtctgctaaatctgggcaacacctgtttcttgaactccttgctccag
ggcttggcagcgtgtccgtccttcatcagatggttggagaagttttcctgtctgcccaca
atccagtcctgtaaggacaaccagctgtccaccacactgcttcagctcctacgagctctg
tccagtgatgagcctggagatgaagatgttcttgatgctggatgcctcttggacattctc
agactgtaccgctggcacatcaactcgtttgaagagcaggatgcacatgaactttttcat
gtcctcacgtcttctctggaggaggagcgaaatcgacaacccaaagtcacacatttattt
gacgtgcagtcactcgagaatctttctaatcaagaagacaaaacaacaacttgcataagt
cgagctcctcttcatccaatcccggacccttggaagtttcagcatccttttcacggccgt
ttaacaagcaacatgtcgtgtaagcgctgtaacatacagagtccagtgcggtatgactca
tttgagaccctctccctgtccatccctcttcctcagtggggtcggcctattactttagat
cagtgcctgcagcattttatttcatccgaaacaatcaaagaagtagagtgtgaaaactgc
acaaagcttcaacaaagtacaactctaaacgggcaggttttagaaagccagagaacgacg
tttgttaaacagctcaaacttggaaagctccctcagtgcctgtgtatccatctacaaaag
ctgacgtggtccagtgaaggaacccccatcaagcggcaggaacacgtgcagttcgcagag
tttctgtcgatggatcgctacaaacacaacagctccacgcagaatcatcgcaggatcaaa
tgtgcccccaaagccccgcgggcagaaagtttaaacgattccacagaaatgcccaaagct
aacgggactgatacagaaaacaacaacaaacctttctctaacggaacctgctcttctgtc
tttattcactctccgggtttaaactcacaacttggcgtaacgtatgacttcagcrtcctc
ccctccagctcgacggagtacttgtttcagcttgtggctgtgctggtccaccacggggac
atgcactcgggacatttcatcacgtaccgccgcagccctcctcggccgcacggctcctcg
gccttcagctcacagtggctctgggtgtcggacgactcggtgcggaggtccagcctgcac
gaggtgctgtcttccaacgcctacatgctcttctatgagagagttcggaggccgagcctg
agccgcgacagtgagctgtgtgaggaaagccgccctggagtgtcggtgtttgagcgttgt
gtgtga
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integrated database retrieval system
