Austrofundulus limnaeus (annual killifish): 106521710
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Entry
106521710 CDS
T06063
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03030
DNA replication
alim03410
Base excision repair
alim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
106521710 (pole)
03410 Base excision repair
106521710 (pole)
03420 Nucleotide excision repair
106521710 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alim03032
]
106521710 (pole)
03400 DNA repair and recombination proteins [BR:
alim03400
]
106521710 (pole)
Enzymes [BR:
alim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
106521710 (pole)
DNA replication proteins [BR:
alim03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
106521710 (pole)
DNA repair and recombination proteins [BR:
alim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
106521710 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
106521710
NCBI-ProteinID:
XP_013869849
UniProt:
A0A2I4BQ62
LinkDB
All DBs
Position
Unknown
AA seq
2287 aa
AA seq
DB search
MVLQNSGRYRSDRGQSGADQENQGDGSSMSAAKRLERSQFTDDMDARFGFDRMKEPGERT
GWLINMHPTEILDEDKRMISAVDYYFIQEDGSRFKVALPFKPYFYVATKMNCEREVISYL
SKKFQGKVAKLENLSKEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVKREIAPAVRKNRER
EQSNDAYTSMLSSALSGGSVAPAEEDGKSKSISDQLDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVQYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLSMHREIGFQKDSQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAIEEEEKLPLEQVTNFNEV
CDEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GALCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLYPNGPARAFHTLNREEQAKHE
KKRLADYCKKAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDSGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKTSNEKKPKVPISYPGAMLNI
LVKEGFTNEQYHELVEPTTLDYNVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFDLISENRSMSRRLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVTHQP
EAGEAPDIEDFGMPARPLQPAIPICHKRKRASQGDBSQVESQDVELTQSWREILGPPPPM
GTTREELLVWLRYHKKKWELQLRQRKEKKKRRKLLDGEVQPVGGGVIRDGPSTSLGSFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGAV
YKKVNRMLPRSNMVYYLYQYSVPEDMYQKHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCLCMVNKHIVRNLAGRETDSFDLEHLEMRSLAQFSYLEPGSVRHMYLYHHSQGQKALF
GLFIPSQRKASIFILDTVRSNQMPNLSNLYTAERTALLEKXTEELLPPEKHTFEVRAEND
IKAISRSLQRILLSYKEERRGPTLIALQSNWELRRLAAGMPVLEEFPVVPVHVVDEINYN
ILDWQRHGARRMIRNYLNLDCCLSQAFEMARYYHLPVGNLPEDVSIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTIL
QSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMVV
GWVREITQFRNKYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMNKVFLQLAAEFKRLG
SAVVYGNFNRLILCTKKRRIDDAIAYVEYITKSIHSREIFHSLSISFSQCWEFLLWMDPA
NFGGVKGKLPSSVLYGEEGTKQKKSRQGEEDEDGSEDEDXAEEDDADGEPEDVEDLIESN
WNIMHYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPIKRRGGSQASQQAVG
DLSALPGMISFSQEYVASELTQNIFTITQKIHKKVTGSRNVTQTSELFPVLPGSHLPLNK
PALEFVKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSDEAQFRDPCNSYILPEVICH
HCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQVQYEKDSIEMALVEVLQKKLMSYTLQDL
VCTKCKGVKEANMPLYCRCAGDFDLTYTTKSFSEQITVFRNIASHYSMRFLDETIDWLLV
MSPQISC
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaacagcggacgataccggtcggaccgtgggcaaagtggagcagatcag
gagaaccagggtgacggctcctccatgtcagccgccaagcggctggagcgcagccagttc
accgacgacatggacgctcgcttcggcttcgacaggatgaaggagcccggrgagaggacg
ggttggctgatcaacatgcaccctacagagattttggatgaagacaagaggatgatcagt
gctgtggactattatttcatccaggaggatgggagcagattcaaggtggctcttcccttc
aagccttatttctatgtcgctactaaaatgaattgcgaaagggaggtcatctcatattta
tcgaagaagtttcaaggaaaagtggcaaagcttgaaaacctttcaaaagaggatctggat
ctgccgaaccatctggttggcctgaagagaaactacatcaagctgtcgttcaacactgtg
gacgacctcatcaaagtcaagcgtgagattgctccggccgtacgcaagaacagagagaga
gagcagtccaacgatgcctacacgtccatgttgtcgagtgccctgtcaggaggcagcgtg
gccccagcggaggaagacgggaagtctaagagtatttcagatcagctggacaacatcgtg
gacatgagagagtacgatgtgccttaccacgtccgattgtccattgacctcaagattcat
gtggctcactggtacaacgttcagtaccgtggcagcgcttacccaccggagatcgtacgc
agggatgatctcgtggagcgaccggaccctgtcgttttggcgtttgacatcgagaccacc
aaacttcctctgaaattccccgacgcagagacggatcagatcatgatgatctcctacatg
attgacggacaggggtttctaatcaccaacagagagatagtctctgagaacatcgaggac
tttgagttcactcccaaacctgaatacgaggggccttttactgtttttaacgaagacgat
gaggccgctctgattcagaggtggtttgatcacgtgcaagaaacaaagccaaatatcttt
gtaacctataatggagacttctttgactggccttttgtggaaactcgggcagccctccat
ggactgagcatgcacagggaaatcggtttccagaaggacagccagggggagtacaagtcc
agtcaggccatccatatggactgcctgaggtgggtgaagagagacagctacttgcccgtg
gggagtcacaatctgaaggcagcagccaaagctaaactgggctacgacccggtggagctg
gatcctgaggagatgtgccgcatggcaaccgaagaaccacagactttagcgacctactcc
gtgtcagacgctgtggccacgtattacctgtacatgaaatatgttcaccccttcatcttc
gcactgtgcaccatcatccctatggagcctgatgaggtgctgcgtaaaggctcagggact
ctgtgtgaagccttgctcatggtgcaggccttccacgccaacatcgtgttcccaaacaag
caggagcaggttttcaacaagctgacggacgacggccacgtcatggactcggagacgtac
gtgggcggacacgtggaggcgctggagtccggcgtgttccgcagcgacatcccctgtcgc
tttaaaatgaacccagctgcgtttgactttctgcttcaaagagtcgagagaaccatgcgg
cacgccatcgaggaggaagagaaactccctctggagcaagttaccaactttaatgaggtg
tgtgatgaaatcaagaagaagctgacgtccttgaaggaggttccaaacaggattgaatgt
ccccttatttaccatctggatgttggagcaatgtaccccaacattatcctcaccaaccgc
cttcagccgtcagctatggtggacgaggccacgtgtgctgcgtgygacttcaacaagccc
ggtgccttgtgtcagaggaggatggcctggcagtggaggggagaaatcatgcccgcgagt
cgcagcgagtttcaccgcatccagcagcagctggagtccgagaagttcccccctctgtac
cccaacgggccggcccgggccttccacaccctgaacagggaggagcaggccaaacatgag
aagaaacgtctggcagactattgcaagaaggcctacaaaaagacgcacgtgaccaggctg
gaggagcgggtcaccaccatctgtcagagagaaaactccttctacgtcgacacggtcaga
gcgttcagggaccggcgttatgagttcaaaggacttcacaaagtgtggaagaagaaactt
tcggcagcgcaggacagcggagatgctgctgaggtgaagcgctgtaaaaatatggagatc
ctgtacgagtcccttcagctggctcataagtgcattcttaactcgttttacggctacgtc
atgagaaaaggagcccgctggtactcgatggagatggccggcatcgtgtgctacaccgga
gccaacatcatcactcaggccagggagcttattgagcaaatagggaggcctctggagttg
gacactgayggtatctggtgtgtccttcccaacaccttcccggagaactttgtgataaaa
accagcaatgagaagaagcccaaagtgcccatctcctacccgggggccatgctgaacatc
ttggtgaaggaggggttcaccaacgagcagtaccacgagctggtggagcccaccacacta
gactacaacgtccgctcggagaacagcatcttcttcgaggtggatggaccgtatctggcg
atgatcctgcccgcctccaaggaggaagggaagaagctcaagaagaggtatgctgtgttc
aatgaggacggctctctggctgagctcaaaggttttgaagtgaagagaagaggcgagctc
cagctcatcaagatttttcagtcctctgtgttcgaggctttcctcaaaggtaccaccctg
gaggaggtctacgcrtctgtggccaaagtggccgactactggctggatgtgctgtacagc
aaggctgccaacatgcctgacgcagagctgtttgacctgatctcagagaatcggtccatg
tccagaaggcttgaggactatggagagcagaagtccacctccatcagcacagctaagaga
ctcgcagagttcttgggagaccagatggtgaaagacgcgggtctgagctgtcgctatgtc
atctcccgaaaaccggagggttcccccgtcacagaaagagccattcctctggccatcttc
caggcagaacccagcgtcaagaagcattttctccgcaagtggctaaagatgcccagcctg
cacgacctggacatacgctctattcttgattggagctattacattgagaggttggggagt
gcaatccaaaaaatcatcacaatccctgcggctctgcaacaggtgaagaatcctgttcca
agagtgagacatcctgactggcttcacaagaaactcctggaaaagaatgacatctacaag
caaaagaagatcagtgagctgtttaccagtgagggcaagagacaggtgacccaccagcct
gaagcaggtgaagccccagacatagaggactttgggatgccagccagacctctgcagccc
gccatccccatctgccacaagaggaaacgggcctctcagggagacracagccaggtggag
tctcaggatgtcgagctgacgcagtcgtggagagaaatcctaggacctcccccgccgatg
ggaacgacacgggaggagcttcttgtttggctgcgctatcataagaaaaaatgggagctg
cagctgaggcaaaggaaggagaagaagaagaggaggaagctgctggayggtgaagtccaa
cctgttggtgggggggtgatcagagatggcccctccaccagcttaggaagtttcctccgc
agaacggcccgcagcatcctggacatgccgtggcagatagtgcagattgctgagacgagc
caccctggtctgtacaagctgtgggctgtgattgggaacgatcttcactgcatgaaactc
aacatcccaagagttttctacgtcaaccagaaagtcccaaagcaggaggagggagccgtg
tacaaaaaggtgaaccggatgctgcctcggtccaacatggtgtactacctgtaccagtac
tccgtaccagaggacatgtaccagaagcacatcaatgagatcaacgctgacctctctgct
ccagacatcgaaggcgtctacgaaacacaggtgcccttgttgttccgtgcgctggtgcag
ctcggatgtctctgcatggtaaacaaacacatcgtgaggaatctggccggcagggagacc
gactcctttgatctggaacatttggagatgaggtctctggcccarttcagctacttagaa
cccggaagcgttcgccacatgtacctgtatcatcacagccaaggtcagaaggctctgttt
ggcctcttcatcccctctcagcgcaaagctagcatcttcatcctggacacagttcggagc
aaccagatgcccaacctgagtaatctctacacagctgagcgcaccgccctcctggagaag
aygacggaggagcttctgcctccagagaaacacaccttcgaggttcgagctgaaaacgac
atcaaggcgatttcccgctcgctccagcgcatcctgctgagctacaaggaggagcggcgt
gggcccaccctcatcgccctgcagtctaactgggagttgcgtcgactggcagcagggatg
ccggtgctcgaggagttccccgtcgtcccggtgcacgtggtcgatgagatcaactataac
attctggactggcagcgccacggggccagacgaatgatccgcaactacctcaacctggac
tgctgcttgtctcaggcatttgaaatggccagatattaccatctacctgtgggtaatttg
cccgaggacgtgtccatctttggctcagacttgttcctggcaagacatctacgaaaacac
aaccacctgctgtggctttcaccgacagccaggcccgacctcggaggtaaagaggctgac
gacagtcgactggtcatggaaagcgatgaccggggctccgtggagatcaacgctcaggga
tgttattccacagtctgcgtggagctggacctgcagagcctggcggtgaacaccatcctg
cagtcgcagcacgttaacgacatggagggcggagccagcctgggcgtcagcttcgatgtg
atccagcaggcgtcgctggaggacatgatgtcaggaaaccagggcgccagcgctctcgct
agctatgatgagacggctctctgctccaacactttcaggatcttgaagagcatggtggtc
ggatgggtcagggagatcacacagttccgcaacaagtacgcagacaaccaggtgatacat
ttctaccgctggctgcgctcgccgagctccctgctgtatgacccggctctgcaccgcacc
ctgcacaacatgatgaacaaagtgtttctgcagttggctgcagagtttaaacgtctgggc
tcagctgtggtttacggaaactttaacaggctcatcttgtgtactaaaaaacgaaggata
gatgatgctattgcctatgtagaatatatcaccaaaagcatacactcmagagaaatcttc
cactctctgtccatctccttctcccagtgctgggagttcctgttgtggatggacccagct
aactttggtggtgtgaagggcaaactgccatccagtgtcctgtatggagaggaaggaacc
aagcagaagaaaagcagacaaggagaggaagacgaggacgggagtgaagatgaagatstc
gctgaggaagatgatgccgatggagagcccgaagacgtcgaagacttgattgaaagcaac
tggaacatcatgcattatcttccccaaacagcttcctgccagaaatacttcctcatgatt
gtctcagcctacattgctgcagtttaccacagcatgaaggaggagctgagacgtaacgct
cctggagccacgccaatcaagagacgcggcggcagccaggcttcccagcaggcagttggg
gacttgagcgcacttcctggcatgatctccttctcccaggagtatgtggccagtgagctg
acacagaacattttcaccatcacccaaaagatccacaaaaaggtgacgggctccagaaat
gtaactcagacgtctgagctgttcccagtcctgcccggctcacacctgccgctgaacaag
ccagctctggagttcgtcaaatatgtctgccaggtcctttcactcgatgccaacattgtg
aatcaagtgaacaaactgaagcgagacctcctgcgtctcgtggacgtcggggagttttca
gacgaggcccagttccgtgacccgtgtaactcctacatcctgcccgaagtcatctgccac
cactgtaacttctgtcgggacctggacctctgcaaggacccgtcagtggcacaggacggg
tcygtcttgcctcagtggttctgctcaaactgtcaggttcagtatgagaaggactcgatt
gagatggctctggtggaagttctgcagaagaaactcatgagctacacactgcaggacctg
gtgtgcaccaaatgcaaaggagtgaaggaggcaaacatgcccctctactgcagatgtgcc
ggagacttcgacctcacttatacaaccaagagcttctctgagcagatcacggtgtttcgg
aacatagcatcccactacagcatgaggttcctggacgagaccatcgactggctgcttgtg
atgagtcctcagatcagctgctaa
DBGET
integrated database retrieval system
