Austrofundulus limnaeus (annual killifish): 106521738
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Entry
106521738 CDS
T06063
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim03013
Nucleocytoplasmic transport
alim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106521738 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
106521738 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106521738 (thoc5)
03041 Spliceosome [BR:
alim03041
]
106521738 (thoc5)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106521738 (thoc5)
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106521738 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
106521738
NCBI-ProteinID:
XP_013869886
UniProt:
A0A2I4BQ55
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MSADVLKKRKSKVLRSEGTPEMKRGREADQQDVRVYNEEVELDSKDPEQDYKLYKESCES
LAKLMSEIQELKASGAKEGSAEVEQKRMQSCILFMNLKKLNRLAHMRLKRGRDQTHEAKQ
KVDVLHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIDLVSEEEFYQDAPTEISRPQLTKT
DAHQLTLARLDWELEQRKRLAEKYKDSQATKEKIQKTIEVKKEHLRSLQPGLNAIMQASL
PVQEYLSMPFEQIQKQTEVARHLPPPLYVLFVQANAYGQACDKNLTVSIDGDVDEAKALS
KPPDDSQDDESDSDAEEEQEKTKRRRPTTGGQLDDKRREMIKRHPLSLCLDLKCKDGSVL
HLFFYYLMNLNIMTVKTTVSTSTDLSMAISAGELLKSDTLLSCLYTSDQGRETPNPANRY
QFDKVGIVSFADYVEDLGYPYMWVQNLGGLHFPGESSEGVLVGSSLSASHMESTMKLLRG
RVQSRLALHKQFASLEHSIVPITSECQNLFPAKIISRLASWTTISQHEYMALPYTRHVTD
AGLAKETDLYFMAVIERGTARLHAAVVLSPRYPEISPLFSLSLNWKGECSGRTDDNLRAM
ESEVNVFKNELQGPRPGHQLLTNQIARLCVCLDLYLETEGQDDSVEGPREFPREKMCLRT
VRGPNRLKPFKYNHPQGFFSHR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgacgttctaaagaagcggaaatcgaaggttctccgcagtgaaggaacaccg
gagatgaagagaggtcgagaggcggaccaacaggatgtgcgggtctacaatgaggaggtg
gagctggacagcaaagaccccgaacaggactacaagctgtacaaagaatcgtgtgagagt
ttagccaaactcatgagtgagatccaggagctgaaagccagtggagccaaggaagggagt
gcggaggtggagcagaagcgaatgcagagctgcatcctcttcatgaatctgaaaaaactc
aaccgtctggctcatatgcggctgaagagaggcagagaccaaacacatgaggctaaacag
aaagttgatgtgcttcaccttcagctgcaaaacctgctctatgaagttatgcatcttcag
aaggagatcagcaaatgtytagaattcaagtctaaacatgaagaaattgacttggtgagy
gaagaggagttttaccaggacgccccgacagaaatctccaggcctcagctcacaaaaact
gatgcccatcagctcacgttggctcgactggactgggagctcgaacagaggaaaaggttg
gcagagaaatacaaggactcacaggcaacaaaggagaaaattcagaagactattgaagtg
aagaaggagcatctgaggagcttgcagccaggacttaatgctattatgcaggcatctctc
ccagtgcaggaatatctgtcyatgccatttgaacagatccagaaacagacagaggttgcg
cggcacctgcctccacctctctatgtrctgtttgttcaagctaatgcttacggccaagct
tgtgataagaacctgactgtgtcaatcgatggagatgtagatgaggccaaagccctgtcc
aaacctccagatgattcccaggatgatgagagtgattcagatgcagaggaagaacaagag
aaaaccaagagaaggcgaccaaccacaggcggccagctggatgacaaaagacgggagatg
ataaaaaggcacccactctccctgtgcttggaccttaagtgtaaagacggcagcgttctg
catttattcttctactacttgatgaatctgaacattatgacggtcaagaccacagtctcc
acctccactgacctcagcatggccatcagtgctggggagcttcttaaatcagacactctc
ctcagctgcctctacaccagtgaccagggcagagaaactcccaatccagccaatcgctac
cagtttgataaagtcgggattgtttcatttgcggattatgtggaggacctgggatatccc
tatatgtgggttcagaatctcggaggactgcactttcctggtgaatcttcagagggtgtg
ctggtggggagttctctgagtgccagccacatggagagcaccatgaagctgctgagggga
cgagtccagtcccgcttggctctgcacaaacagtttgcctctttagaacacagcattgtt
ccaatcaccagtgagtgccagaacctgtttcctgccaagatcatctcccgcttagcgagt
tggaccaccatcagtcaacatgagtacatggcgctgccttacacccgtcatgtaactgat
gccggactggccaaggagacggacctgtactttatggcagtcatagaaagaggcacagct
cgactccatgccgcagtggttctgagtccccgttacccagagatctctcctctgttttct
ttgtctctgaactggaagggagagtgtagtggacgcactgacgacaaccttcgtgccatg
gagagtgaagtgaacgtgtttaaaaatgagctgcagggacctcggccggggcaccagctt
ctcaccaatcagatagctcgcctgtgcgtctgcctggacctgtatttggagacagaagga
caagatgacagcgtagaaggacctcgtgagttccctcgtgaaaagatgtgcctgcgcact
gtcaggggtcctaatcgcctgaagccattcaagtacaaccatcctcagggtttcttcagt
caccgttaa
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