Austrofundulus limnaeus (annual killifish): 106521740
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Entry
106521740 CDS
T06063
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04137
Mitophagy - animal
alim04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106521740 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106521740 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alim03019
]
106521740 (vcp)
03009 Ribosome biogenesis [BR:
alim03009
]
106521740 (vcp)
04131 Membrane trafficking [BR:
alim04131
]
106521740 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alim04147
]
106521740 (vcp)
Messenger RNA biogenesis [BR:
alim03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106521740 (vcp)
Ribosome biogenesis [BR:
alim03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106521740 (vcp)
Membrane trafficking [BR:
alim04131
]
SNARE
SNARE associated proteins
Others
106521740 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106521740 (vcp)
Exosome [BR:
alim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106521740 (vcp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
AAA_17
Mg_chelatase
ATPase_2
AAA_7
ATPase
AAA_18
ABC_tran
DUF815
IstB_IS21
NB-ARC
nSTAND_NTPase5
TsaE
AAA_24
ResIII
NACHT
SLFN-g3_helicase
Viral_helicase1
Zot
Motif
Other DBs
NCBI-GeneID:
106521740
NCBI-ProteinID:
XP_013869892
UniProt:
A0A2I4BQ70
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MASGGESKNDDLATAILKQKNRPNRLVVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDSCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHSEGEPIRREDEEEALNEVGYDDIGGVRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQMIVKVANETHGHVGADLAALCS
EAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITW
DDVGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGA
ADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRISI
LKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRKERERQTN
PSAMEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSS
AAGGSGPSHGSGGTGGGPVFNEDNDDDLYG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggaggggaatccaaaaatgatgatctagcaactgcaattctgaaacagaag
aacagacccaacagactggttgttgatgaatccatcaatgaagacaacagtgtggtctct
ctttctcaggccaagatggatgagctgcagctgtttcgtggagacacagtgctaatgaaa
ggaaaaaagaggcgggagactgtctgcattgtgctttctgatgacagctgttctgatgaa
aaggttcgcatgaacagggtggtccgaaacaatctgagggtccgcctaggcgatgtcatc
agcattcagccatgtcctgatgtgaagtacggaaagaggatccatgttctcccaattgat
gacacagtggaaggaattacaggcaacctgtttgaggtctacctgaagccatacttcttg
gaggcttatagaccaatccgcaaaggggacattttcctggtcagaggaggcatgcgtgct
gtggagttcaaggtggtggagaccgatccttccccctactgcattgttgctcctgacaca
gttattcactctgagggtgagccaatcagaagagaggatgaggaggaggccctgaatgag
gtgggctacgatgatattggaggagtcaggaagcagttggctcagatcaaagagatggtg
gagctgcctctcagacacccttcactgttcaaggccataggagtcaagcccccacgtgga
atccttctatacggaccccctggaactggaaaaackttgattgccagagctgtggccaat
gaaacaggagctttcttcttcctaattaatggccctgagataatgagtaaattggcaggt
gagagtgagagtaatctgagaaaggcctttgaggaagctgagaagaatgctcctgccatc
atatttattgatgaacttgatgcaattgcaccaaagagagagaagactcacggagaggtg
gaaaggcgcatcgtttctcagctgctgactctaatggacggcctgaaacagagagctcat
gtgatcgtcatggctgccactaacagacccaacagcattgatccagccctcagaagattt
ggacgttttgacagagaagtggacattggcatccccgatgcaacgggccggttggagatt
ctgcagattcacaccaagaacatgaaactggctgatgatgttgacttggaacagatgatt
gtcaaggttgctaatgagactcatgggcatgtgggtgcagatctggctgctctctgttct
gaagctgctctgcaggccattaggaagaagatggacctgattgaccttgaggatgagacc
attgatgctgaagtcatgaactctcttgctgttactatggatgacttcaagtgggctcta
agccagagtaacccatctgcactgagagagacagttgtggaagttcccaacatcacctgg
gacgacgttggaggtctggaagatgtcaagagagagctgcaggagttggtgcagtaccct
gtggagcatccagacaagttcctcaagtttggcatgaccccatccaagggtgtgctcttc
tatggtccccctggttgtggtaagactcttttggccaaagctatcgccaatgagtgccag
gcaaacttcatctctatcaaaggacctgagctgctcaccatgtggtttggagaatccgag
gctaacgtcagagaaatctttgacaaggctcgtcaggctgctccatgtgttctgttcttt
gatgagctggactccatagccaaggcccgcggtggcaacgtgggagacggcggcggagct
gccgaccgtgtcatcaaccagatcctgactgagatggacggaatgtcragcaagaagaac
gtgttcatcatcggcgctacaaacagaccagacatcattgatcctgccatcctgagacct
ggccgtctcgaccagctcatctacatccctctgcccgacgagaagagcaggatcagcatc
ctgaaggccaacctccgcaagagtcccatcagcaaggatgtggacttggacttcttggct
aagatgaccaatggtttctctggagctgatctcacagagatctgtcagcgggcgtgtaaa
cttgccatcagagagagcatcgagaacgagatccgcaaagagagggagcggcagacgaat
ccatcagctatggaggtagaggaggatgatcccgtgccagagatcaggaaggaccatttt
gaagaagcaatgagatttgctcgtcgttctgtcagtgataatgatattcgcaaatatgag
atgttcgctcagacactgcagcagagccgtggcttcggcagcttcaggtttccatccagt
gctgcaggtggcagtggtccaagtcatggctcaggtggaaccggtggtggtcctgtgttc
aatgaagacaatgacgatgatctttatggataa
DBGET
integrated database retrieval system
