KEGG   Austrofundulus limnaeus (annual killifish): 106521834
Entry
106521834         CDS       T06063                                 
Symbol
vps11
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim04140  Autophagy - animal
alim04142  Lysosome biogenesis
alim04148  Efferocytosis
alim05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:alim00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    106521834 (vps11)
   04140 Autophagy - animal
    106521834 (vps11)
   04148 Efferocytosis
    106521834 (vps11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106521834 (vps11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:alim04131]
    106521834 (vps11)
Membrane trafficking [BR:alim04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    106521834 (vps11)
   Hops complex
    106521834 (vps11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd TPR_Vps41 Clathrin zf-C3HC4_2 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st zf-rbx1 zf-RING_2 Beta-prop_IFT122_1st zf-C3H2C3 Beta-prop_VPS8 zf-C3HC4 zf_RING_Vps8_fungal zf-ANAPC11 zf-RING_5 Beta-prop_EML_2 Beta-prop_HPS5 TPR_GEMI5 CC_Bre1 zf-RING-like
Other DBs
NCBI-GeneID: 106521834
NCBI-ProteinID: XP_013870033
UniProt: A0A2I4BQM6
LinkDB
Position
Unknown
AA seq 923 aa
MAAFLQWRKFVFFDKDTVKDPADSGKTFTLPKGITASDSGRSHVVLGDMEGRIWLLSRSL
QLTSFQAYKLRVTHLFQLKQHSILVSVGQDEPGINPLVKVWNLEKRDSGNPLCTRIFPAI
PGNKPTEVSCLSVNENLNFMAIGFTDGSVVLTKGDITRDRHSKTVNLHEGSSPVTGLAFR
QMAKMTHLFVATLEKVFCYTLSNKEYPKLELGSHGCALRCSSLSDPSQDSQFVVAGNECV
YLYQPDERGPCFAFDGLKLLALWHRGYLFLLTRDVKSPSKTGFDSRDSSQSEKQLLTVYD
LDNKFIAYSATFDDVIDVVAEWGSFYILTRDGQMSVLQEKDTQTKLEMLFKKNLFVMAIN
LAKSQHLDSDGLSEIFRQYGDHLYLKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVEIAIKVLRQA
GYHKHSVFLAERHRNHEWYLKIQLEDLKNYQEGLRYIGRLPFEQAESNMKRYGKTLMHHV
PEGTTMLLKGLCTNYQPSGDTADRDSLDRIKANSEEFIPIFANNPRELKAFLDHMINVDP
HSPQGVYDTLLELRLQDWAHEQDREKKTILQEEALSLLRSDNTVFDKALVLCQMHNFKEG
ILYLYEKGKLYQQIMHYHMQNEEYGKVVQACKQYGEQEGCLWEQALGYFARKEEDCKAXI
SEVLRHIDQKNLMPPLLVVQTLAHNSTATLSVIKDYLISKMQRESQQIEDDERKICQYRE
ETAHVRSEIQELKTSAKIFQKTKCSMCNSPLELPSVHFLCSHSFHQHCFESYSESEAECP
TCTPENRKVIDMLRAQDQKRDLHDLFNRQLHSSNDGFSVVADYFGRGVFNKLTLVTDPPG
NKAIGGLEANLQRDLLTQKKRNG
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggcagcgtttttacagtggagaaaattcgtcttctttgataaagacaccgtgaaagac
cccgcagatagcgggaaaacctttactctccccaaaggaataacggcaagtgactccggc
cggagccatgttgttctcggagatatggaggggagaatctggctcctgtctcgctccctg
cagctcacctcttttcaggcctacaagctgcgggtgacccacctgttccagctgaaacag
cacagcatcctggtgtcagtggggcaagatgaacctggaataaaccctctagtaaaggtc
tggaaccttgaaaagagagacagtggaaatcctctctgtaccaggattttccctgccatt
ccaggcaacaaacccacagaagtctcttgcctgagtgtcaatgagaacctcaacttcatg
gccattggcttcacagacggcagtgtggttctgaccaaaggtgacatcaccagagatcgt
cacagtaaaactgtgaatctgcacgaggggagcagtccagtcaccggccttgccttcaga
caaatggccaaaatgacacatttgtttgttgccactctggagaaagttttttgctacacc
ctgtccaacaaggaatatcctaaattagagctcggtagccatggctgtgcgctgcgctgc
tcgtccctgtctgatccgtcccaggattcccagttcgtcgttgctgggaatgaatgtgtg
tacctgtaccaaccagatgaacgggggccttgctttgcttttgacggtctcaagctgttg
gccctctggcaccgtggatatttgttcttactcaccagagacgtgaagtcacccagcaaa
acagggtttgacagcagggacagctcccaatcagagaaacagcttttgaccgtctacgac
ctggacaacaagtttatcgcctacagcgccacttttgacgatgtgattgatgtggtggca
gagtggggctccttctacattctgaccagagacggacaaatgtctgtactccaggaaaaa
gacacgcagaccaaactcgagatgctgttcaagaagaacttgtttgtgatggccataaac
ctggctaagagccagcacctggacagtgacggactctcagagatcttcagacaatacgga
gatcatttatacctaaagggggaccatgatggagccatccagcagtacatccgcaccatc
gggaagctggagccttcatatgttatcaggaagttcctggatgcacagaggattcacaac
ctgacagcttatctgcaggccctccacaggcagtccctggccaacgcagaccacaccacc
ctgctgctcaactgttacaccaagctgaaggacagctccaagctggaggagttcattaag
accagtgagagtgaagtccactttgacgttgagatcgccattaaggttcttcgtcaggct
ggctaccacaaacactctgtgttcttggctgaaaggcacaggaaccatgagtggtacctg
aagatccagctggaggacctcaagaattatcaggaagggctgcgatacattggccgttta
ccttttgagcaagctgagagcaacatgaaacgttacggtaagacgctcatgcaccacgtt
cctgaaggtacaaccatgctgcttaaaggcttgtgcaccaactaccagcccagtggagac
actgctgacagagacagtttggacaggattaaggcaaattctgaggaattcattcccatt
tttgccaataacccccgagaactgaaagcctttctggaccacatgatcaacgtggatccc
cactctcctcagggtgtgtacgacacactgctggagctccggctgcaggactgggcacac
gagcaggaccgtgagaaaaaaaccatcctgcaagaggaagctctgtccctgttgagaagt
gacaacactgtgtttgataaggccctggttctttgtcagatgcacaattttaaagaaggc
atcctctacctttatgagaagggcaaactgtatcagcagataatgcattaccacatgcag
aatgaggagtatgggaaagtagtgcaggcctgcaagcagtatggagagcaggagggctgc
ctctgggagcaggccctgggatactttgcaagaaaggaagaggactgtaaggcctaratc
agtgaggttctgcgtcacattgatcagaaaaacctgatgcctccattacttgttgtgcag
actctagcacacaactcgacggccactctctcggttatcaaggactacctcatcagtaag
atgcagagagaaagccagcagatagaggatgacgaacgtaaaatctgccagtaccgggag
gagacggctcatgtccgctctgagatccaggagctgaaaaccagcgccaagatctttcag
aagactaaatgcagcatgtgcaacagtcccttggagcttccatcagttcacttcctgtgc
agccactccttccaccagcactgcttcgaaagctactcagagagcgaggccgagtgtcca
acctgcacgccagaaaaccgtaaagtcatcgatatgctgcgtgctcaagaccagaaacgt
gaccttcatgatcttttcaaccgacagctgcacagctctaatgacggcttctcggttgtg
gcggactactttggtcgaggagtatttaacaaactcactttggtcacagaccctcctggt
aacaaagctattgggggtctggaagccaacctacagcgagaccttcttacccagaagaag
agaaacggttag

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