Austrofundulus limnaeus (annual killifish): 106522018
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Entry
106522018 CDS
T06063
Symbol
ush1g
Name
(RefSeq) Usher syndrome type-1G protein
KO
K21878
Usher syndrome type-1G protein
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
alim03037
]
106522018 (ush1g)
Cilium and associated proteins [BR:
alim03037
]
Primary cilia and associated proteins
USH complex and associated proteins
106522018 (ush1g)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_2
Anamorsin_N
Attacin_C
Motif
Other DBs
NCBI-GeneID:
106522018
NCBI-ProteinID:
XP_013870308
UniProt:
A0A2I4BRF7
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MNDRYHRAARDGFLDVLKEATRKDLNALDEDGMTPTLWAAYHGNLEALRLIVGRGGDPDR
CDIWGNTPLHLAAANGHLNCLSFLVSFGANVWCLDNDYHTPLDMAAAKGHMDCVRYLDSI
AAKQITLNAKLVGKLKERAFHAAERRIKDCEKLQRRHHERMERKFVKESAAFDNLDAISF
SSYTSSKFNTVTSNMPYSQATLHSTAKGKAKIQKKLEKKKQVDGTFKIYEDGRRSVRSLS
GLQLGNDVMFLKQGTYANPKERTRLNIRDMFPRENDDDVESVSRAMSDPGLYEAAYSEIS
ADSGRDSLFTRPGLGTMVFRRNYMTAGMFGMGGRNEGSVAGSEPVGRAPNVRLRGQLPRR
PPSFDEDSIGSAYSLQERNLQELPWEEMDVELDEDMEPENNPLETFLASQGLGEFLSILS
REKIDLEALLLCSEQDLTGIHIPLGPRKKLLDACKRRLDTIEDPEAIEDTEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccggtaccaccgggcggcccgggacggcttcctggacgtcctgaaagaggcc
acgcggaaggatctgaacgccctggacgaggacgggatgacgccgaccttatgggccgct
taccacggcaacctggaggcgctccggctcatcgtgggcagagggggggatccggaccga
tgtgacatctgggggaacacgccgcttcacctggcagcagccaacggtcacctcaactgt
ctgtccttcctggtgtccttcggtgccaacgtgtggtgtctggacaacgactaccacacg
ccgctggacatggccgccgccaagggccacatggactgcgtccgctacctggactccatc
gccgccaagcagatcacgctcaacgccaagctggtcggcaagctcaaagagcgggcgttt
cacgccgccgagcgtcggatcaaggactgcgagaagctgcagaggcggcaccacgagcga
atggagaggaagttcgtgaaggagtcggcggctttcgacaacctggacgccatcagcttc
tccagctacaccagcagcaagttcaacaccgtcacctccaacatgccatactcacaggcc
accctgcactcgacagcgaagggcaaagccaagatccagaagaagctggagaagaagaag
caggttgatggaacgtttaagatctacgaggacgggaggaggagcgtgcgctcgctgtcc
ggactgcagctggggaacgacgtcatgttcctcaaacaaggcacctacgccaaccccaag
gagcggacccgtctcaacatccgggacatgttcccccgagaaaacgacgacgacgtcgag
tccgtctcccgtgccatgagcgacccgggtctctacgaagcggcgtactcagagatcagc
gccgactctgggcgggactctctgttcacccggcccgggctcggcaccatggtgttcagg
aggaactacatgaccgctggcatgttcgggatgggagggcgaaacgaagggagcgtggcg
ggaagcgaacccgtgggccgagcgcctaacgtccgcctgcggggacagctgccccgacgc
ccccccagcttcgacgaggacagcatcggcagcgcctacagcctgcaggaaagaaacctg
caggagctgccctgggaggagatggacgtggagctggacgaggacatggagcctgaaaac
aaccctctggagactttcctggcctctcagggcctcggagagttcctgtccatcctcagt
cgggagaagatcgacctggaggctctgctgctttgttcagaacaggacctcaccggcatt
cacatccctttgggccccagaaaaaaactgttggacgcctgtaagagacgtttggacacg
atcgaggacccagaagccattgaagacactgagctctga
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