Austrofundulus limnaeus (annual killifish): 106522241
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Entry
106522241 CDS
T06063
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
alim04515
]
106522241
Cell adhesion molecules [BR:
alim04515
]
Cadherins
Cadherin related
106522241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
Cadherin_pro
CADH_Y-type_LIR
EGF
hEGF
Y_Y_Y
Big_9
Cadherin_4
GspA_SrpA_N
Motif
Other DBs
NCBI-GeneID:
106522241
NCBI-ProteinID:
XP_013870634
UniProt:
A0A2I4BSE6
LinkDB
All DBs
Position
Unknown
AA seq
2953 aa
AA seq
DB search
MIWVTLLPILILCVAGNRTLDLVPFFXGHVFENSPPGSRVNGLSVPLKRLNSNQPCGTGG
TGSVATHFKLLGEGSEDFRVFAHHKRGHVLLKTSRILDREERAEYALGLGSCCGQCAELS
SRDAEQLVAEIASIKVDVLDTNDHQPIFPSADVKLSLDDATALRTAVCSFSARDDDSGKN
AELIYFTEPRNGSFYAVPKSGDILLVDSILGLDEPIKFKVFARDRGWPPRTSQGIAVEIN
PRQWPVAPSITPQPEKENLNPQSDAGARKSRSVPESDSPVFISVSEDAGIGSVVMNLNPV
RFQPATFELVEPDTESSPVSVSRETGDLVILRRLDRETEPLLEITVRVQDKRGPEWYLIR
VELTVTDVNDNVPEWSMVPSPYLAVVPPDASAGSVVYKLSAQDGDEGINGEVEYFLSDGG
DGRFEVHRKSGQVQTTGLPLQRDREYLLTVVAADGLGSRSAPAVVSVVAGARPPQFVNSS
FTIAIPENTPEGQTFLVTPAVSFQKKPISYSLVINPSSLFAMSAETGEISLTRSIDYESD
QHRYLLLVRASEGQDSMRSAAEVRVVIVDENDCVPEFLQSIYSKDSVPETVTTATSLLQV
SASDCDSGTNAELTYYTLSPDFSISPHGTIFPAGPLDYERPNHLYEFVVMAIDKGETPRT
GTTTVRIRMANVNDEAPDFSQHIYRTFVSEDAGPNTLVATVLAKDPDGDGITYKITTGNE
EGNFVIDSQKGLIRLRSSPPPRLQGIEYVLNVTATDDNASGGPQALSSTAQVIVGVDDVN
NNKPVFEKCQQYRESTSVLENQPAGTFVLQVHAVDADEGSNGRVTYGFMHKDSTVPAFSI
HPDTGAILTARKFDRERQREYAVTVTATDQAADPLIGICQLNILILDQNDNSPKFENIRY
EYFLREDTMIGTSFLRVAAHDDDFGTNAAVTYSMSSEQPEYLRVSPLTGWVYVHQPISQR
TYITREIVATDGGNRSSSVELAVTITNVKNQPPQWDNDTYSIVIPENTVRDTPIVTIKAT
SRLGDPRVTYNLEDGMVPETNMPVRFYLTPNREDGSASILVAEPLDYETTRNFILRVRAQ
NVAAVPLAAFTTVYVNVTDVNDNVPFFTSSIYEASVTEGAESGTLVFQVSANDLDLGLNG
KISYSLLEDRSGDHQYFRIDPELGFIYTQAVFDRETKSSYLLEVQSVDGWESARPGKHGQ
PNSDTAYVRVFISDVNDNKPTFGQASYEVDVDEDADVGFAILTVSANDGDEGGNAKLRYQ
ITSGNTGGVFDVEPEVGTIFIAQPLDYEQNKRYKLHVLASDGKWEDYTTVTVNVVNKNDE
APIFTVNEYYGSVTEELDGSPVFVLQVTASDPDKDADQEALRYSLHGQGAESEFIIDEVT
GKIYAQRTLDREERAVWRFVVLATDEGGEGLTGFTDVIINVWDINDNAPIFPCALSCHGD
VAENSATGTSVMEMSATDLDDSAVGQNAVLSYRIVGSLDATSAELGGVPTFSEMFTINPT
TGTIAVGIGGLDREQVESYLLVVEARDGGGMTGTATATILIKDMNDHAPRFTDHSCLARI
SENAEPNAEVLELAAEDRDTGENAQLTFSVVAGDQEQKFYMVSLKQEQRGILKLKKRLDY
ERHSEQRFNLTLKVEDLDFSSFLHCLVEVEDYNDHAPVFIPHFLALTPLPEDISVGTSVA
RLVASDSDSGQNHEITYSLSEDSDPDGLFAIDQSGVLSVSRPLDREKTAQHLLVVIASDH
GIPPLTGSATVQLPLLDVNDNGPEFEAAYSPVVFENVAGPQVVRLNQTSTLIQAVDKDSP
ENGPPFHFTVPPEYRYSNDFYLQDNLNGTATLTALRTFDRERQKEFLLPIIMSDSGHPAK
TVTSTLTVTIGDQNDHPHVSGEKQISINSHRGHMPTTVLGKVYAPDPDDWDNKTYVFEGH
MPSYFILNKRTGFLIIKENTPTGTYQFQVRVSDGIWPDAVSTITVHVRELREEAIYNSGS
LRLADITSKEFLELRGKQRSRYELLVDFLSEMLSVPSGDVNIFSLMDVKERMLDVRFAVH
GGSSFLQPEKMHGYLAAHKQKLQSFLQVSVFQIRVDECHDSECIGAGGCTNVLNVRDTPT
VVDCGTMSLVSVTVESTAVCSCPGREQSHQSCATYPRNPCFNGGVCVDTQHGYRCQCPAQ
FEGPECQQNKHSFHGNGYAWFPPMMPCFESHVSLEFITDVVDGLLLYSGPLAQLQTWDHE
DFMAIELIDGTPTLKINHGSGTLVLQLPGNVNVADRRWHRLDVRSNSKEVRFTLDRCSGA
AVMEMEGLGSWLTTEDHSSCEVTGLTPNTDRHLNMSQVLQLGGVNEDIPYIYPQLQHKHF
TGCIRNLIVDSKLYDLGSPADYQSSSPGCLTTDSSCVNMGYPSCGHRGRCHGEWGSFSCQ
CVAGYMGHQCEEEVPEYSFDGHSHVHYQLASPLPARRTWIQVMVRTRKHSSILFNLISKE
QTEYLRLEIFQGLLCVFYNLGDGEYNLTLPNYRLDNGEWHEVFFDRYDNEMMLRLDGGGG
QREVTGSRGRSREIIIDPSAVMLGNSFSSGINKSFQGCMRDVRLNGRYMPLDSQPRDGVS
QVKVQGLSKGCSSDSCKRNQCSPPFTCVDLWRVHECRCPPGHMIRANGTRKSCVYTLCAT
RPCHHGTCVAQSPSKFTCHCPEGFRGRHCETTLAVYREEVGLSFSSLFAMCICFMALLVL
LLGIFLYTRWRSYKGLKEGVYHVSAHHDGWEDIRENVLNYDEEGGGEEDQNAYDMAELQK
SLQPSPAQSVQYCRSRALHHPPPSHHHHHLLHQAPPAPPSAQTLDPLSRTSSSTTLPPSA
ASTSSTTTTTTTTSLRRDVPPARPPAQGQARPPQLSRRSLSFSSQDLARYLCEIIRDADQ
HPDSGPFDSLQVFSTEGGGSPAGSLSSFSSAGLDGGSSGDGGVEARREETLGEWGPRFEK
LRALYERAEASDL
NT seq
8862 nt
NT seq
+upstream
nt +downstream
nt
atgatttgggtaacgcttttaccaattttgatattgtgcgtagccgggaacaggacattg
gaccttgtgccgttcttcyatgggcatgtatttgagaactcgcctcctggctcgcgggtc
aacggactcagtgtgccattgaagcggctaaactcgaatcaaccgtgcggcacagggggg
accggctcagtggcgactcacttcaaactcctgggtgaaggcagcgaggatttccgcgtc
tttgcgcaccacaaacgcgggcacgttttactgaaaacttctcggattttggaccgggag
gagcgggctgaatacgcactgggtctgggttcgtgctgcggccagtgcgccgagctctcc
tccagagacgcagagcaacttgtcgccgagatcgcgtccatcaaggtggacgttctggac
actaacgaccaccagcccattttccccagtgcagacgtgaagctgagcctggatgatgcc
actgcgctccggacagcggtctgctcgttcagcgcgcgggacgatgacagcgggaagaac
gccgagctcatctacttcaccgagcccagaaacgggagtttctacgcggtgcccaaatcc
ggggacatccttcttgtggactccatccttggtctggatgaaccgattaagtttaaagtt
tttgcacgtgatcgcgggtggcctccgcgcacaagccaaggcatcgctgtggaaataaat
ccccgacagtggcccgtggcgccctcaataacaccccaacctgaaaaggagaatctaaac
ccgcagagtgacgcgggagcgcgaaagtccaggtccgtcccggagtcagacagtcccgtt
ttcatcagcgtgtccgaggacgcagggatcggttcggtggtgatgaacctgaacccggtc
aggtttcagccggccacgtttgagctggtggagcccgacacggagagctcccctgtgagc
gtgagccgcgagaccggggatttagtcatcctgcggagactggaccgggagaccgagcct
ctgctggagatcaccgtcagggtgcaggataaaagaggtcctgagtggtacttgatcaga
gtggagttgactgtgactgatgtaaatgataacgtcccagaatggagcatggttccttct
ccctaccttgcagtggtcccccctgatgcttctgcaggatcagtggtgtacaaactcagt
gctcaggatggggatgaaggtatcaatggtgaagtggaatactttctgtctgatggtggt
gatggtcgctttgaagtacacagaaagagtggccaggtccaaacgacaggtcttcctctg
cagcgggacagagagtacctgttgacagtggtagctgctgatgggctgggcagtcgtagt
gctccggctgttgtctctgtagttgctggagcccggccaccacagtttgttaattcttcc
ttcacaattgccataccggagaacacccctgaaggacagaccttcctggtgacacctgcc
gtgtcctttcaaaagaaaccaatcagctacagccttgtcatcaaccccagcagtctcttc
gccatgtcagcagagacaggtgaaatcagcctgacccgctctattgattacgagagtgac
caacatcgatacttgctattggtgcgagccagcgagggccaggacagtatgaggagtgca
gcagaggtacgagttgtgatygttgatgaaaatgactgcgttccagagttcctccagtcg
atttacagcaaggatagcgtaccagagactgttacaacagcaacttccttgttgcaagtg
tcagccagtgactgtgactcaggcacgaatgcagagcttacctattataccctgagtcca
gatttttccatttcccctcatgggaccatcttcccagcggggcctttggactacgaaaga
cccaatcacctgtatgagtttgttgtcatggccattgacaagggagagacccctcgcaca
ggcaccacaacagtacggattagaatggccaatgtcaatgatgaggcacctgatttctcc
caacatatataccggacctttgtttctgaagatgcaggccctaacacacttgttgccact
gtgctggcaaaggaccctgatggagatgggatcacatataaaattaccacaggaaatgaa
gaaggcaattttgtcattgacagtcaaaaaggtttgattcgtttgcgctccagcccacca
cctcgcctgcagggtatcgaatatgtccttaatgtcaccgccactgatgacaacgcctca
ggcggacctcaggcattatcatccacagcacaggtcatagttggcgtggatgatgtgaac
aacaacaagcctgtctttgagaagtgtcagcagtaccgagagagcacatcagtcctggaa
aaccagccagcagggacattcgttctgcaggttcatgctgtggatgcagatgaaggctcc
aatggcagggtcacatatggcttcatgcacaaagactccactgtgcctgctttcagtatc
catccagacactggagcaattctgactgccaggaaatttgaccgtgaacgccaacgggag
tatgcagttacagtaacagccacagaccaggcagctgatcccctgattggaatttgtcag
cttaacattcttatcctggaccagaatgacaacagccctaagtttgagaacattcgatat
gagtacttccttcgtgaggacaccatgattggaactagttttttgcgggtggcagctcat
gatgatgactttggcaccaatgcagccgttacgtacagtatgtccagtgagcagcctgag
tacctcagagtcagcccactgacgggctgggtgtacgtccaccagcccatctcacagagg
acctacatcacaagggaaattgtggctacagatggagggaacaggagcagctctgtagag
ttggctgtcaccattaccaatgtgaagaaccagcctccacagtgggataatgacacttat
agcatagtgataccagaaaacactgttcgagacacacccatcgtgaccatcaaagccacc
tccagacttggagatccaagggtaacctataatttggaagatgggatggtcccagagact
aacatgcccgttcgcttttacttgacccccaaccgcgaggatggttcggcgtccattttg
gtggcagagcccctggactacgagaccaccaggaatttcattctgcgagtgcgagctcag
aatgttgctgctgtaccactggctgccttcactacagtttatgtcaatgtaactgatgtt
aatgataatgtcccatttttcacttcttccatctacgaggcatcagtcactgaaggagca
gaatctggaactttggttttycaggtttcagccaatgacctcgacttgggccttaatggc
aagatttcttactccttgctggaagatcgtagtggagaccatcagtattttcgtatcgac
cctgagctgggcttcatctacactcaggctgtgtttgacagagagaccaaaagctcatac
ttgttggaggttcagtctgtggatggctgggagtcagcacgacctggcaagcatggacaa
cccaactctgacacagcatatgttcgtgtttttatcagcgatgtgaacgataataagccg
acgtttggacaggcttcctatgaagttgatgtggatgaggacgctgacgtaggctttgct
attctcacagtcagtgccaacgatggggacgaaggtggaaatgccaagctgcgataccag
atcacatcaggaaacacagggggtgtgtttgatgtcgagccagaggtgggcacaatcttc
attgctcagcctctagactatgaacaaaacaaaaggtacaaacttcacgtcctggcttca
gatgggaagtgggaagattatacaacagtaacagtaaatgtggtgaacaagaatgatgag
gcaccaatcttcacagtcaacgagtactatggcagcgtaacagaggagttggatggttca
cccgtgtttgttttgcaggtgacagcatctgacccagataaggatgctgaccaggaggcc
ctgcgttactcccttcatggtcagggtgcagagagtgaattcataatcgatgaagtaacg
gggaagatctatgcccagcggaccctggaccgcgaggagcgtgcggtttggcgttttgtc
gtcctggcaacagacgagggcggtgagggtctaacaggcttcacagacgtcatcatcaat
gtttgggacatcaatgacaacgcacccatcttcccctgcgctctcagttgccacggagat
gtagcagagaactctgcgacaggaacttctgtcatggagatgagtgcgaccgacctggat
gactcggctgtggggcagaatgctgttctctcttataggatagtgggcagtttggacgcc
acaagtgctgagttaggaggagttcccaccttctcagaaatgtttacaatcaaccccacc
acagggactatagctgtagggataggtggtctggacagagaacaagttgagtcctacctc
cttgttgtggaggccagagatggaggaggaatgacaggaactgcaactgcaaccattctg
atcaaggatatgaatgaccatgctccaagattcactgatcactcctgcctggcacggatc
tctgagaatgcagaacccaatgcagaggtcttggaactggctgcagaagaccgggacact
ggagaaaatgcccagttaacctttagtgttgtggctggagatcaagaacagaaattttac
atggtcagtctcaagcaggagcagcgaggcatcttgaagctgaagaaacgtttggactat
gaaagacacagtgagcagaggttcaacctcactctgaaggttgaggacttagacttttca
agctttttgcactgcttggttgaggtggaggactacaatgaccatgcccctgttttcatt
ccacactttcttgctctaaccccsctycctgaggatatcagcgtggggaccagtgtggct
cgtctggtggccagtgattcagactcaggccagaaccacgaaatcacctacagcctgtca
gaggactcagatcctgatggtctgttcgctattgaccagtctggtgtactctcagtgtct
cgtccactagatcgagagaaaacagcccagcatctcttggttgtcatagcatctgaccat
gggattccacctctaacaggaagtgccactgttcagctgcctctgttggatgtaaatgat
aatggaccagagtttgaggctgcatactccccagtagtttttgagaatgttgctggacca
caggtagtaaggttgaaccaaacatcaactctcatccaagctgtggacaaggactcccct
gaaaatgggcctccttttcatttcacagtgcccccggagtatcgctacagcaatgatttc
taccttcaggacaacttgaatggaacagcaacactaacagctttgaggacatttgaccgt
gagcgccagaaagagtttctccttcctataattatgagtgacagtggtcatccagccaaa
acagtgaccagcaccctgactgtgaccatcggtgatcaaaacgaccaccctcatgtgtca
ggggagaagcaaatttccatcaatagccacagaggtcatatgccaacaacagttcttgga
aaagtttatgctccagaccctgatgattgggacaacaagacctatgtttttgaggggcat
atgccaagttacttcatcctgaacaagagaaccggtttcctaatcattaaggagaacacc
ccaacaggaacttaccagttccaggtccgagtgtctgatggaatttggccagatgctgtc
tccactatcactgtacatgtcagggagctgcgagaggaggccatctacaactctgggtcc
cttcgcctggcagacattacctcaaaagagttccttgaactgagagggaagcagcggagc
cgctacgagctgctggtggatttcctgtctgagatgctttctgttccatctggtgatgtt
aacatcttcagcctaatggatgtgaaggagcgaatgttggatgttcgctttgctgtgcac
ggcggctcatccttcctccaacctgaaaaaatgcatggttatttggctgcccacaaacaa
aagctccagtcattcctgcaagtcagtgtgttccaaatccgtgtagatgagtgccatgat
tcagagtgcatcggtgcaggcggctgcaccaatgttttaaacgtgcgagacacacccaca
gtggtggactgtggaactatgagtctagtgtctgtgacggtggaatccacagctgtgtgc
tcatgcccaggcagagagcagtcccatcagtcctgtgctacatatcccagaaacccctgc
ttcaatggaggcgtgtgtgtggatactcagcatggttacaggtgccagtgcccagctcag
tttgagggacctgaatgccaacagaacaagcacagtttccatggcaatggctatgcctgg
tttcctcctatgatgccttgctttgagagccatgtgtcgttggagttcatcacagacgtg
gttgatggactgctgctgtacagtggcccgctcgcccagctgcaaacctgggatcatgag
gatttcatggccatagaactaatagatgggacccccaccctaaaaatcaaccatggatcc
ggcacactggtgcttcagttgccaggaaatgtcaacgttgcagacaggcgctggcatcga
ctggatgtccgcagcaacagcaaggaagtacgttttactttggatcgatgttcaggagct
gcagtaatggaaatggaaggtctgggcagctggttgactactgaagaccactcttcctgt
gaagtgacrggccttacaccaaacactgacagacacctgaacatgagtcaagtgctccag
cttggtggtgtgaacgaggacatcccttacatctaccctcagcttcagcacaaacacttc
actggctgcatccgcaacctcattgtggacagcaagctttatgacttgggctccccggct
gactaccagtccagctctccgggctgcctgaccacagacagcagctgcgtcaacatgggc
tatccgtcctgtggccaccgtggtcgctgtcacggtgagtgggggtccttcagctgccag
tgtgttgccggctacatgggccaccagtgtgaagaagaggtcccagagtactcctttgat
ggtcacagtcacgtgcattaccagctggcatcgccactgcctgctcgaagaacatggatc
caagttatggttcggactcgtaaacacagcagcatcctcttcaatctaatctccaaggag
cagacagagtacttgcgtctggagatttttcagggcctcctttgtgttttctacaatctt
ggtgatggagagtacaacctaactctgcccaactaccgcctggacaatggtgaatggcac
gaggtcttctttgatcgttatgacaatgagatgatgctgagacttgatggtggtggaggt
caacgggaagtgacaggatcacggggcagaagtcgagagatcattattgatccctctgct
gtgatgctgggaaactctttttcctctggaatcaacaagagcttccaaggctgtatgagg
gacgtacgcctcaatggtcgttacatgccactggacagccagccacgggatggggtttcc
caggtcaaagtacaaggactctccaaaggatgctcctctgactcctgcaaaaggaaccaa
tgtagcccccccttcacctgtgtcgacttgtggagagtgcatgaatgcagatgtccacct
ggccacatgattcgtgcgaacgggaccaggaagtcctgtgtctataccctgtgtgctacg
cggccttgtcaccatgggacgtgtgtagcccagtcgccctccaagttcacctgccactgc
ccggagggattcagaggacggcactgtgagaccaccctggcagtttacagggaggaggtg
ggcctgagcttcagctccctcttcgccatgtgtatctgcttcatggcattactggtgctc
ctgctgggcatcttcctctacactcgctggaggtcctacaaagggctgaaggagggcgtg
taccacgtgtctgcacatcacgacgggtgggaggacatccgagagaacgtgctcaactat
gacgaggaggggggtggagaggaggaccagaacgcctacgacatggcagagctacagaag
tcgcttcagccgagcccggcccagtcggtccagtactgccgctcccgagccctgcaccac
ccgcctccttcccaccaccaccaccacctcctccaccaggcgcccccggccccgccctcc
gctcagaccctggaccccctcagtcgcacgtccagctccacgaccctgcccccctccgcc
gcctccacttcctccaccaccaccaccaccaccaccaccagcctccgaagggacgtgccg
cccgccaggcccccggcccagggccaggcgcgccccccgcagctgtcgcggcgctcgctg
tccttctccagccaggacctggctcgttacctgtgcgagatcatccgcgacgccgaccag
cacccggactccgggccctttgactccctgcaggtgttctccaccgagggagggggctcg
cccgccggctcgctcagctccttcagctcagcaggactggacggggggagctcgggggac
gggggagtcgaggcgcgccgggaggagacgctcggcgagtgggggccccgcttcgagaag
ctgcgggcactgtacgagcgagccgaggccagcgacctctga
DBGET
integrated database retrieval system
