KEGG   Austrofundulus limnaeus (annual killifish): 106522251
Entry
106522251         CDS       T06063                                 
Symbol
rnf2
Name
(RefSeq) E3 ubiquitin-protein ligase RING2
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
alim  Austrofundulus limnaeus (annual killifish)
Pathway
alim03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:alim00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    106522251 (rnf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:alim04121]
    106522251 (rnf2)
   03036 Chromosome and associated proteins [BR:alim03036]
    106522251 (rnf2)
Enzymes [BR:alim01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     106522251 (rnf2)
Ubiquitin system [BR:alim04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106522251 (rnf2)
Chromosome and associated proteins [BR:alim03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     106522251 (rnf2)
    Noncanonical PRC1 (PRC1.1)
     106522251 (rnf2)
    Noncanonical PRC1 (PRC1.3/1.5)
     106522251 (rnf2)
    Noncanonical PRC1 (PRC1.6)
     106522251 (rnf2)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_4 RING_XB3-XBAT31 zf-Nse zf-RING_5 zf-RING_4 zf-RING_6 zf-rbx1 zf-UDP TRAF3_RING zf-C3HC4_5 CAMSAP_CC1 zf-ANAPC11
Other DBs
NCBI-GeneID: 106522251
NCBI-ProteinID: XP_013870646
UniProt: A0A2I4BSB6
LinkDB
Position
Unknown
AA seq 354 aa
MTQTVQTNGIQSLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN
TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARISKHNNQQALSHSIEEGLKIQAMTRLQRGKRHTVENGSGAEDNGDSSHCS
NASVHSNQEAGPSIKRTKTSDDSGLDMDNTAENGGGDSVIDGGTSEIELVFRPHPTLMEK
DDGQNSVEFVPRYIKTSGNATVDHLSKYLAVRLALEELRRNAEASPVNVEAASEKQYTIY
IPTAANQFTVLNGSFSLELVSEKYWKVNKPMELYFAPTKEHKCVPNMMTLHLTV
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgactcagacagttcaaaccaacgggattcagtctctcagtaagacctgggagctgagt
ctgtatgagctgcagagaacaccacaggaggctataacagatgggttagagatagcagtg
tcacccaggtccttgcacagtgaactcatgtgtcccatctgcctggacatgttgaagaac
acaatgacaaccaaagagtgtctgcaccgcttctgtgctgattgtatcatcacagctttg
agatctggtaataaagagtgtcctacctgtcgtaaaaagcttgtttctaagaggtccctt
cgtccagacccaaactttgatgctctgattagtaagatttatcccagccgtgatgagtat
gaagcccaccaagagagagttttggcccgcattagcaaacacaacaatcagcaagccctg
tcccacagcatagaagagggtctgaaaatacaggctatgaccagacttcagcgtgggaag
agacacacagttgagaatggtagtggggctgaggacaatggagactcctcccactgtagc
aacgcttctgtccacagtaaccaggaggcaggcccaagcatcaaacgcaccaaaacaagt
gatgacagcggtttggacatggataatactgctgagaacgggggcggggactctgtaatt
gatggcggkaccagcgaaatcgaattggtgtttagacctcatcccacattgatggaaaaa
gatgatggacaraacagtgtggagtttgtgccgcgctacattaagacatcaggcaacgct
acagtggatcatctgtctaaatacctggctgtccgactggctctggaggagctgaggaga
aatgctgaagccagtcctgttaatgtggaggcagcgtctgagaaacagtacaccatctac
atccctactgctgcaaaccagttcactgttctaaatggttctttctccctggagctggtc
agtgagaagtactggaaggtcaacaaacccatggagctgtacttcgctcctactaaagaa
cacaagtgtgtcccaaacatgatgaccctgcatctcactgtttga

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