Austrofundulus limnaeus (annual killifish): 106522258
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Entry
106522258 CDS
T06063
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alim03041
]
106522258
Spliceosome [BR:
alim03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106522258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
106522258
NCBI-ProteinID:
XP_013870656
UniProt:
A0A2I4BSC4
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All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MALFTNDAPSLGAYYCLIRRKFKRRRKKRSERKGAVGARLLSGQNKSDTMDLDEEENMSS
SSTDVKENRNLDNVSCKDGMGVADQLPNGSGPGSRKRPLEEGNNGQAHSKFRAKKRKKTP
GPVLPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQVFEGMGPTKKKAKLNA
AEKALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETPAVPEESFYLGS
NGTNSLGEYPLPTPPGSNLAQAPLPPSSAFSSPSTGKNPVMILNELRPGLKYEFVSESGE
SHAKNFVMSVTVDAQTFEGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPREGLQL
HLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKEAQVICVSTGTKC
INGEYMSDRGLALNDCHAEIIARRSLIRYLYTQLEFFLSNSKEENQKSIFDLCDKGGYRL
KDNVQFHLYISTSPCGDARIFSPHEAGVEDQGDRHPNRKARGQLRTKIESGEGTIPVRSS
NTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIYFSSIILGSLYHADHL
SRAMYQRIADIEDLPQQFTLNRPLLSGTRSERIIKWLKLLLILHSHIFSKETNLTK
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggccctttttaccaacgacgcgccgagtctgggcgcctattactgcctgatccgacgc
aagtttaagaggaggcggaagaaacgctccgaacgcaaaggtgcagtgggggcgaggctg
ctctcaggtcaaaacaaatctgacaccatggatctcgatgaggaagagaatatgagttca
agcagcactgacgttaaggaaaaccgaaacctggacaacgtgtcctgcaaagacgggatg
ggagtcgctgatcagctccccaatggcagtggccctggcagtcgaaagcgtccattggag
gagggtaacaatggtcaagcccattccaagttccgagccaagaagcgcaagaaaacacct
gggccagtgctgcccaagaatgctctgatgcaactgaatgaaatcaaaccgggtctacaa
tacaaactgctgtctcagacaggaccagtccatgcaccagtttttgtcatgactgtggag
gttaatggtcaggtgtttgagggcatgggcccgaccaagaagaaggctaaactgaatgca
gctgagaaagcgctacgttcttttgtccagttccccaatgcatcggaggctcacctggcc
atgggccgaactttaacagtgaacacagactttacatctgaccaagccgactttccagac
atgctcttcaatggcttcgagacaccagctgtacctgaagaatccttctatctaggttcc
aacggtacaaactcactaggggaatacccgttgcctacaccacctgggagcaaccttgcc
caggccccattgcccccttcatctgcattcagttcaccatccactggcaaaaacccagtc
atgatcctcaatgagctcagaccaggcctcaaatacgagtttgtttcagaaagtggtgaa
agtcatgccaagaattttgtgatgtcggtaacggtggacgcacagacatttgaaggctca
ggacgcaacaagaaactggctaaagctcgggcagcacaagctgctctgtctgctctgttc
aacatgcagcttgaccagacaccatcccggcaacctataccaagagaagggttgcagctt
cacctaccccaggttctagctgatgccgtctctcgcctggtggtcgataagttcagcgag
ctgacggacaacttcacctccccgcatgcccgtcgaaaagtcctggcaggagtcgtgatg
acaacagggacagatgtgaaggaagcgcaggttatttgcgtttctacaggaaccaaatgc
atcaacggtgagtacatgagcgaccgcggcctggcactcaatgactgccaygctgagatc
atcgcccgacgctcgctcatcagatacctctacacccagctggagttctttctcagcaac
agcaaagaggagaaccagaagtcgatatttgacttgtgtgacaagggaggctacaggtta
aaggataacgttcagttccacctctacatcagcacctcgccctgcggagatgccaggatt
ttttctccacacgaagccggagtggaagatcagggagacagacatccgaaccgcaaagca
agaggccagctgaggaccaaaattgagtcgggagagggcaccatccccgtgaggtccagc
aacaccatccagacctgggacggggttcttcagggagagaggctgcttaccatgtcctgc
agtgacaagattgccaggtggaatgtggtgggcatccagggttctctgatgagctacttc
acagagccgatctacttctccagcatcatcctgggcagcctttaccacgccgaccacctc
tccagggccatgtaccagcgcatcgcagacatcgaggacctgccgcagcagttcaccctc
aacaggcctctgctcagcggtacgagaagtgaaaggatcattaaatggttaaaactcctg
ctaatattgcatagtcatatcttctccaaagagacaaacctgaccaagtga
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