Austrofundulus limnaeus (annual killifish): 106522345
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Entry
106522345 CDS
T06063
Symbol
stab1
Name
(RefSeq) stabilin-1
KO
K19020
stabilin-1
Organism
alim
Austrofundulus limnaeus (annual killifish)
Pathway
alim04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106522345 (stab1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
alim00536
]
106522345 (stab1)
Glycosaminoglycan binding proteins [BR:
alim00536
]
Hyaluronan
Cell surface receptors
106522345 (stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_TEN
FXa_inhibition
EGF
Motif
Other DBs
NCBI-GeneID:
106522345
NCBI-ProteinID:
XP_013870779
UniProt:
A0A2I4BSU3
LinkDB
All DBs
Position
Unknown
AA seq
2548 aa
AA seq
DB search
MVLVLVLVLLLSLCRQSSGQQQTPAPGRCDLPQRLDLHTDCTSCAAALTSSCPQGFTKVG
SVNCSYVVQIGSIQMELLGCKHVCAKTTLYPQCCPGHWGPLCLPCPSWSGRTCNFNGVCV
DGDVGNGTCVCNEGFSGFACHECKNPDVFGKNCDKVCDCVNGVCNKGPDGDGQCLCQPPY
TGKRCDQVSSRCSSCSSYSYCRGDRDNAECECLPGYRRMTQNKCSRVCTSTDCDINAQCS
LKGSKMACACKPDYEGDGRVCVPKNPCLQNNGGCPINSTVCVFRGPNKSSCQCMAGMSPL
SGSPEFGCRLLSACSPDTCDSSAVCHTELNGKPRCVCEAGQIGDGRRCYGNLMERLIDLD
SAGSQKENLTGAVELFERGCLMLLSRSGPFTAFFPLLKQPLPGVNAQVVCKNHLILGQHL
YKELQGRDFRLFGGEYMRVKVNQKFILMSNPSRVYTIIQPDLPAANGIIHIIDRPITNSL
PDRSPRDQQFADKTIGEILTKDEKFNRFLSLVDNCGSPPPLRGPGPLTVFVPTNEAVDRA
RDGSILYMLNDAKHKLQELLRHHVFSQAVLTVDELAALPGIRTMANQLVSISASEDGELQ
LDKKGIRLASSNIVASNGIIHMIDGLLYPPSILPILPHRCDITESKITVGPCVHCSFLSE
TQCPEGSVEMSSYQIGCDYVQTFVGHPLIKGCAKYCNMTRQVAECCKGFYGPDCKPCIGG
FQHPCYDKGKCLDGIHGNGSCSCHSGFEGIACHICSDPTKHGDGCDEECRCIHGVCDNRP
GSGGVCRRGSCLEGFSGDYCDRKATPCNADGLLEHCHVHAFCTQTGLDTRCVCNDGYEGD
GHTCSPVNLCLKNTRGGCDVNAECVYVGPGNVSCVCAEGWTGDGKVCVEINNCQLVGRGG
CSPDADCNHIGPGQSECVCKTGYMGNGKVCDLINPCFTNNGGCHDLAKCEQKQGGLHTCT
CPDGYAGDGKICFGSLLDELDMNIKMYSFFKLIQKFSHASEDLSGNLTVLVPSRDVLKNM
SADENSFWTSRHRLPHFLRAHILVGVYSVEDLDRLVGSRLPTLNPSTQWEIRNISGIIHI
GNAAIIVHNLPARNGYLHIVNQVMTPPLSSLPPEPPTLMAFLNSSSSFSLFGRYALVYNL
SGELEDLEFTLLLPTDEAVRQHLSRTNSSVLDSDTFRYHVIPKEMLFPDQLHDGLVKSTL
LGADYQVQFHLNNKNQTVVNNVLLNSSFTETQNGIIMVLPQVLTVQRNRCSKDVFLQVKG
RCSDCEGPPRCLFSYSPIRETFPANMKPNCVYRKRVMSRRKSVPGCVIQCLRQTTDHSCC
PGFYGHECFKCPGDAGSRCSGHGECQDGNHGNGECRCYEGFHGTACEDCEPGRYGVNCSS
KCACDHGKCSDGLTGTGRCTCYKGWKGASCSTEIKDDACGGVCDENANCVTGPQGSAAAC
SCVAGYEGNGTFCKEVDLCSRSNGGCSKFAVCTKVSGGERTCACNQGYTGDGVVCLEIDG
CLVNNGGCHKSAECIRTGPNTTACSCRSGFQGSGKFCYPVNPCRTNNGGCSKFARCEYMG
LGQRNCTCFRGHVGDGFDCRGSTTNELYRQPENAFFRLMLSKTESPALYGDGPYTVFVPL
EKSNNQSTVDEWKRAGHIEHLVRYHVVSCEVLTLSDLKTTKRALSVSGYPLDFSVQQGSV
WINNVSRIVKSDYQTSNGVIHHIDTLLTPYKLEEKPQLEFKTMNFSSAAMLYGYTRFYKL
IEDAGLLPVLQMSIHQPFTVFWPTDTALASLPAERQRWLSSPDHQDQLAATVKAHIVRNA
KLTGIGQPTKSTWYRTMHGSTITFSCDKALVGDVLINEDAARLVERFMPFKEGLGFGIDQ
LLEPPGLGAFCDSVENKTTFGRCGNCFVPPPCAIRQIDTGRKTPCLRRNSRYRPRYTSWG
IPDDRFSVMGCMRVCQYSSWVQKCCKNHYGRDCQVCPGGVEDPCGSHGDCDDGVTGSGLC
RCHKGFKGKSCELCVSGYYGANCTACSCGMGSCDDGVDGTGRCVCKPGWEGDGCQNKIGS
VPPECRQCHAQAMCVSRVGCLCKPGFEGNGTFCSPAPPPDLCSEYNGGCHLNADCNQTGL
LVNCTCRSGYRGDGFSCEPINRCVEEQNGGCSDFASCKFTGPNERECECLLGYVGNGVQC
LEKVVPPVDRCLLDNGGCDPVATCKDLHFHANTAGVFHLRSQEGRYKMNFSQAGAACQDE
GAMLATFKQMGDAQQLGMHLCVAGWMEGGKVGYPTRFPSARCGENHVGLVMYKEPVDQSS
EYDAYCYRLRDVSCVCSDGYVGNGDFCNGVLTNVLATNSNFSIFYKLLLDHSGSEEGRRL
VEVLSYRKSEVTLFVPHNSGFPQNQTLSVRDLQYHVSANHSRRPFKDLRHQEVIVSLLGF
NLTVTHSKNQSCKLVNQQLLLDWDIPAVNGIIHVIEAPLRAPAPPVNHGDNRVSTHAAGA
VSAILVVVLACLLAVGGYYVFRHKMDAFRFHYFKNEDEDAATGSTNKPTLVSIPNPLYSG
SRAFAEPFEDTCQEAEPKEPPNLLELDQ
NT seq
7647 nt
NT seq
+upstream
nt +downstream
nt
atggttctggttctggttctggttctgctgctgagtctctgcagacaaagttcaggacaa
cagcagactcctgctcctggtcgctgtgacctccctcagagactggaccttcacacagac
tgcacctcctgcgccgccgccctcacctccagctgcccccagggtttcaccaaggtcggc
tccgtcaactgcagctacgtggtgcagatcggcagcatacagatggagctgctgggatgt
aagcacgtctgtgcgaagaccaccctgtacccacagtgctgccccggacactggggtcca
ctttgtctcccctgtcccagctggtcagggagaacctgtaactttaacggagtctgtgtc
gatggagacgttggtaacggcacctgcgtctgtaatgagggtttttcgggtttcgcctgc
catgagtgtaaaaatccagacgtttttggaaagaactgtgataaagtgtgtgactgtgtg
aatggagtgtgtaacaaaggtccagatggtgatggacagtgtttgtgtcagccaccgtac
accgggaagcgctgcgaccaagtgagcagcaggtgcagcagctgcagctcctactcgtac
tgcagaggagacagagacaacgccgaatgtgaatgtttgcctggatacaggaggatgact
cagaacaaatgttcaagggtttgcacgtcgacagactgtgacatcaacgctcagtgctcc
ttgaagggctcaaagatggcgtgcgcctgtaagcccgactacgagggcgacggacgggtc
tgcgtgcccaaaaacccctgtttacagaacaacggagggtgtcccatcaactccaccgtc
tgtgtcttcagaggtcccaacaagtccagctgtcagtgcatggcaggaatgtctcctctc
tctggaagtcctgagtttggctgccggctcctgtctgcctgctcacctgacacctgcgac
tcctcagctgtctgtcacactgagctgaatggaaaacccaggtgcgtctgcgaggcgggt
cagattggagacggtcggcgttgctatggtaacctgatggagcgcctcatcgacctggac
tcggcgggcagccagaaggaaaacctgacaggagccgtcgagttgttcgagagaggctgt
ctgatgctgctgagtcgctccggacccttcaccgccttcttccctctgctgaaacaacct
ctgcctggtgttaacgcacaggtggtgtgtaaaaaccacctgatcctgggtcagcacctg
tacaaagaactgcagggtcgagacttcaggctgtttggaggagaatacatgagagtcaaa
gtcaatcagaagttcatcctgatgagcaaccccagccgagtgtacaccatcatccagccc
gacctgccggcagctaacggcatcatccacatcatcgaccggccaatcacaaactcgctg
cccgacaggtcgcctcgtgaccaacagtttgcagacaagacgatcggggagattctgacc
aaagatgaaaaattcaaccgtttcctgtctttggttgataactgcgggtctcctcctcct
cttcgtggaccaggacccctcaccgtgtttgtccccactaacgaggcggtggatcgggcc
cgagacggcagcatcctgtacatgctgaacgatgccaaacataaacttcaggagctactc
agacatcatgttttctcccaggctgtgctgacagtcgacgagttggctgctcttcctggc
attcggacgatggccaatcagttggtctctatctctgcgtcagaagacggggagctccag
ctggacaagaagggcattcgactggcgagcagcaacatcgtggcgtccaacgggatcatc
cacatgattgacgggctgctgtacccgccctccatcctgcccatcctgccccaccgctgt
gacatcaccgagagtaaaatcactgtgggtccgtgtgttcactgcagcttcctgtctgag
actcagtgtcctgaaggcagcgtggaaatgagcagctatcagatcggctgtgactacgtc
caaacttttgtcggacacccgctcatcaaaggctgcgccaaatactgcaacatgaccaga
caggtagcagagtgctgtaaagggttctacggtccggactgtaaaccgtgtatcggagga
ttccagcacccttgttacgacaaaggaaagtgcttggacggtatccatgggaacggctcg
tgcagctgtcactcaggcttcgagggaatcgcctgccacatctgctccgacccgaccaaa
cacggagacggctgcgatgaagagtgtcgctgcatccacggcgtgtgtgataaccgcccc
ggcagcggcggggtgtgtcggagagggtcgtgtttggagggattctctggagattactgt
gacaggaaggccacgccctgtaacgccgacggcctgctggagcactgtcacgtgcacgcc
ttctgcacccagacgggcctggataccaggtgtgtgtgtaacgatgggtacgaaggcgac
ggccacacctgtagtcccgttaacctgtgcctgaagaacacccggggaggttgtgacgtc
aacgcggagtgtgtgtacgtgggtccaggtaacgtgtcgtgtgtgtgcgccgagggctgg
acaggtgacggcaaagtgtgtgtggagatcaacaactgtcagctggtgggccgaggaggc
tgcagccccgacgccgactgcaaccacatcggacctggacagagcgagtgtgtctgtaaa
actgggtatatggggaacgggaaggtgtgtgacctcatcaatccctgcttcacaaacaac
ggaggctgccatgacctggcgaagtgtgagcagaagcagggcgggcttcacacctgcacc
tgtcctgacggctacgcaggagacgggaagatctgcttcggatctttactggatgagctg
gacatgaacataaagatgtacagtttcttcaaactgatccagaagttcagccacgcctcc
gaggatctgagcgggaacctcacagtcctggttccgtctcgagatgtcctgaagaacatg
agcgccgatgagaactcgttctggaccagccgacaccgcctgcctcacttcctgcgggct
cacatcttggtgggggtctactctgtggaggatctggaccgtctggtggggagcaggctg
cccactctgaacccgtccactcagtgggagatcaggaacatcagtgggataatccatatt
ggaaatgctgccatcattgttcacaacctgcctgcacgcaacggttacctccacatcgta
aaccaggtcatgaccccgcccctctccagtctcccacctgaacccccgacgctgatggct
ttcctgaactcatcctccagcttctccctcttcgggcgatacgctctggtgtacaacctg
tcaggtgagctggaggatctggagtttaccctcctgctgccgacagacgaggccgtcagg
cagcacctcagcaggacgaactcatcggtgctggactcggatacgttccggtaccacgtg
attcccaaagagatgctcttcccggaccagctgcacgacggtttggtaaagagcactctg
ctgggcgccgactaccaggtccagttccacctgaacaacaaaaaccagacggtcgtgaac
aacgttcttctgaacagcagtttcactgaaacacagaacggcatcatcatggtgctcccg
caggtgctcacagtgcaacgcaacagatgcagcaaagacgtcttcctgcaagtcaaagga
aggtgttcagattgtgaaggacctcctcgctgcctcttcagctactctccaatcagagag
acgtttcctgccaacatgaagcccaactgtgtgtacaggaagcgggtcatgtccaggagg
aagtctgtgccgggctgtgtcattcagtgtctccgacagaccacggaccactcctgctgc
cccggtttctacggccacgagtgcttcaagtgccccggagacgccggcagccgttgctcc
ggccacggggagtgtcaggacggtaaccacggcaacggagagtgccgctgctacgagggt
ttccacggcaccgcctgcgaggactgtgagccgggccgctacggagtcaactgctcctcc
aagtgcgcgtgcgatcacgggaagtgcagcgatggcctgacaggaactggcaggtgtacg
tgttacaaaggttggaaaggagcttcctgctctacagaaatcaaggatgacgcctgtgga
ggtgtatgtgatgagaacgccaactgtgtaacaggtccacagggatcagctgctgcctgt
tcctgtgtcgctggatacgagggaaacggaaccttctgcaaagaggtggatctgtgcagc
aggtcgaacggcggctgctccaagtttgctgtctgcacgaaggtctcaggcggagagagg
acctgcgcctgtaatcagggctacactggagacggagtcgtctgcctggaaatcgatggc
tgtctggtcaacaacgggggctgccacaaatcagccgaatgcatcagaactgggccgaat
actaccgcctgcagctgccggtcgggctttcaagggtcaggaaagttctgttatcccgtc
aacccctgcagaaccaacaacggcggctgcagtaaattcgccaggtgtgagtacatgggt
ctgggtcagaggaactgcacctgcttcagaggccacgtgggcgacggcttcgactgcaga
ggaagcaccaccaacgagctgtaccgtcagccggagaacgccttctttcggctgatgtta
tctaaaacagagtctcctgctctttatggcgacggaccgtacactgtcttcgtacctctg
gagaaatccaacaatcagtccactgtggacgagtggaagagggcgggtcatatagagcac
ctggtgcgttaccacgtagtttcctgtgaggttctgaccttaagtgacctcaaaaccacc
aaacgtgccctctctgtgtcaggataccctctggacttcagcgtgcagcagggttcagtg
tggatcaacaacgtgtcgaggatcgtgaagagcgattaccagaccagtaatggagttatt
caccacatcgacacgctgctgacgccctacaagctggaggaaaaaccacagctggagttt
aaaacgatgaacttcagctcagcggccatgctgtacggttacacccgcttctataaactc
attgaggatgcaggtttactcccagtgctccagatgtccatccaccagccgttcaccgtc
ttctggcccaccgacacggccctggcctccctgccggccgaacggcagcgctggctctcc
agccccgaccaccaggaccagctcgccgctaccgtcaaagctcacatcgtccgcaacgcc
aaactgacggggatcggccagcccactaaatccacctggtatcggaccatgcacggatcc
accatcacgttcagctgcgacaaagcgctggtgggagacgtgttgattaatgaagatgca
gccaggcttgtggagcgcttcatgcccttcaaggagggcctgggcttcggcatcgaccag
ctgctggagccgcccggactgggagccttctgcgacagcgttgagaacaaaaccaccttc
ggacgctgtggaaactgttttgttcctccgccctgcgccatcagacagatcgacacgggg
aggaaaactccttgtctcaggcgtaactccaggtacagacccagatataccagctggggc
atcccggacgatcgcttcagtgtgatgggctgcatgagagtctgtcagtattcttcctgg
gttcagaagtgctgcaaaaaccactacggcagggactgccaagtgtgtccggggggcgtt
gaggacccctgcggcagccacggagactgtgacgacggcgttaccggatcaggactctgc
aggtgccacaaaggattcaaagggaaatcctgcgaactctgcgtgagcggatactacggg
gccaactgcacagcctgcagctgtgggatgggaagctgtgacgatggcgtggacggcacc
ggtcggtgtgtctgtaagccgggctgggaaggggatggctgccagaacaagatcggctcg
gtcccaccggagtgccggcagtgccacgctcaggccatgtgtgtgtcacgggtcggctgt
ttgtgtaaacctgggttcgagggcaacgggactttctgcagcccggcaccgcctcctgat
ctctgctccgagtacaacggcggctgtcacctgaacgcagactgcaaccagacagggctg
ctggtcaactgcacctgtcgcagcgggtaccgcggcgacggcttctcctgcgagcccatc
aacaggtgtgttgaagagcagaacggcggctgcagcgacttcgcctcctgcaagttcacc
ggtccgaacgagcgtgagtgtgagtgcctgctggggtacgtgggaaacggagtccagtgt
ctggagaaggtggtgccccccgtggaccgctgcctgctagacaacggaggctgcgacccc
gtggccacctgcaaggacctccatttccacgccaacacagccggagtgttccacctgcgc
tcacaggaggggaggtacaagatgaacttcagtcaggccggcgccgcctgccaggatgag
ggcgccatgctggctaccttcaaacagatgggcgacgcccagcagctcgggatgcacctg
tgtgtcgccggctggatggagggcgggaaggtgggctatccgacccgcttcccctcagcc
aggtgtggagaaaaccacgtgggcctggtgatgtacaaagaacctgtggaccagagcagc
gagtacgacgcctactgctacaggctcagagatgtctcctgcgtgtgctctgatggttac
gttggaaacggggacttctgtaacggcgtcctgaccaatgttcttgcaacaaacagcaac
ttctccatcttttacaaattgctgttggaccacagcggctcggaggagggtcgacggctc
gttgaagttttgtcttacaggaagtctgaagtcacgctgttcgttcctcataactctggg
tttccacagaaccagactctgtctgtgagagatctgcagtaccacgtctcagccaatcac
agcaggcgacccttcaaggacctgagacatcaggaagtcatcgtgtcactgctcggattc
aacctgaccgtgacccacagcaagaaccagagctgtaagctggtgaaccagcagctgctg
ctggactgggacatccccgccgtcaacgggatcatccacgtcatcgaggcgccgctgaga
gcccccgcccccccggtgaaccacggcgacaacagagtctccacccacgccgccggtgca
gtgtcggccatattggtggttgtgttggcgtgtctgttggctgtaggcgggtactacgtc
ttcagacacaagatggacgccttccgcttccactatttcaaaaacgaggacgaagacgct
gcgacaggaagtaccaacaaacccacgctggtttccatccccaacccgctgtacagcggc
tccagagccttcgccgagccattcgaggacacgtgtcaggaagcagaacccaaagaacca
ccaaacctcctggaactggaccagtag
DBGET
integrated database retrieval system
