Austrofundulus limnaeus (annual killifish): 106522450
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Entry
106522450 CDS
T06063
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
alim
Austrofundulus limnaeus (annual killifish)
Brite
KEGG Orthology (KO) [BR:
alim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alim03021
]
106522450 (taf1a)
Transcription machinery [BR:
alim03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
106522450 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1_subA
YozE_SAM_like
COG4_N
Motif
Other DBs
NCBI-GeneID:
106522450
NCBI-ProteinID:
XP_013870909
UniProt:
A0A2I4BT69
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MQNMDDLDKELEVHRDVDEDSDSSDNSSKKGQKAKLPLVKHLYVESRNETGFLQSCRKCL
EQIREAMLHHRWEEAAEFMACYCQVLEHKKNSTAQRELVWRMSTEILHHHPNSTGVDYNS
VYERMKHSGVKLYLMICLEHSFHLMLHGQIEEAKQQLSVAESWRYGKVSNAQLQRTKLIQ
AYRSLLDYIMWWEKMSNLSKTDCFDPDYQGIHTYFRQASVNLQDILKNPGVWDPFILSYI
EMLEFYGDHEEALKVLNNYAFDNSFPPNPNAHVYIYQYLKRHDAPEKKLMKVLKNIQVLV
PSHELMLEYSSLLLQSEKTSDTQKALKVLLEMLDFGCWRSXLDVWKCLQAVIHDLQLQDD
WESVVWGLMEARREFWPAMHFTSFHAATDSEENPELLNVKASLTKILCPDQTLRYTAEQS
VDGEQSQRH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatatggatgacttggacaaagagctggaggtgcacagggacgtggacgaggac
agtgactcctcagacaacagctctaaaaaaggacaaaaagcgaagcttcctttggttaaa
catctgtacgtagagtcgcgcaatgaaactggctttctgcagtcgtgcagaaagtgtttg
gagcaaatcagagaagccatgctgcatcacagatgggaggaggcagcggagttcatggcg
tgctactgtcaagtccttgagcataaaaagaacagcacagcacagagagagcttgtttgg
aggatgagcactgagatccttcaccaccatcccaactcaacaggggtcgactacaacagc
gtctatgaacgaatgaagcactcgggtgttaaactttacctgatgatttgcctggagcat
tccttccacctgatgctccacggtcagattgaagaagcgaagcaacagctgtctgtcgca
gaaagctggcgttacgggaaggtgtccaacgctcagcttcagaggaccaaattgatccag
gcctacaggagcttgttggattatatcatgtggtgggagaaaatgtctaacctttccaaa
accgactgtttcgacccagactaccagggcatccacacttacttccgacaagcttctgtg
aatcttcaggacattttgaaaaacccaggagtctgggatcctttcattttgagctacatt
gagatgttagagttttatggggatcacgaagaggctcttaaagtcctgaataactacgca
ttcgacaacagttttccacccaatcccaacgcacacgtgtacatataccagtatttaaag
aggcacgatgctccagagaagaagctgatgaaagtcttaaagaacatccaggttttagtt
ccaagccatgagttgatgttggagtacagctccctcctgcttcagtcagagaaaacaagc
gacactcagaaagctttaaaagtcctccttgagatgcttgacttcggctgctggaggagc
arcctggacgtgtggaagtgtttacaggccgtaattcatgacctgcaattacaggacgac
tgggagagcgttgtctggggactcatggaggcgagacgagaattttggcccgcgatgcat
ttcaccagcttccacgccgcgacagactccgaggagaaccctgaacttttgaacgtaaag
gcatcgctcacaaaaatcctttgcccagatcaaactctgaggtacaccgcagagcagtca
gtggatggagaacagagtcagagacattaa
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